RNA–Protein interactions for RNA: ENST00000356435.9

PTPRD-202, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRD, Length 9,472 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-202ENST00000356435 AP1S2P56377 157 aa5.51□□□□□ -1.53
PTPRD-202ENST00000356435 PPP3CAQ08209 521 aa5.51□□□□□ -1.53
PTPRD-202ENST00000356435 RASGEF1BQ0VAM2 473 aa5.51□□□□□ -1.53
PTPRD-202ENST00000356435 DGCR6Q14129 220 aa5.51□□□□□ -1.53
PTPRD-202ENST00000356435 ZNF697Q5TEC3 545 aa5.51□□□□□ -1.53
PTPRD-202ENST00000356435 VSTM1Q6UX27 236 aa5.51□□□□□ -1.53
PTPRD-202ENST00000356435 PIGZQ86VD9 579 aa5.51□□□□□ -1.53
PTPRD-202ENST00000356435 LRRC52Q8N7C0 313 aa5.51□□□□□ -1.53
PTPRD-202ENST00000356435 CKAP2Q8WWK9 683 aa5.51□□□□□ -1.53
PTPRD-202ENST00000356435 ARNTL2Q8WYA1 636 aa5.51□□□□□ -1.53
PTPRD-202ENST00000356435 NMD3Q96D46 503 aaKnown RBP5.51□□□□□ -1.53
PTPRD-202ENST00000356435 TDRD1Q9BXT4 1180 aaKnown RBP5.51□□□□□ -1.53
PTPRD-202ENST00000356435 ATXN10Q9UBB4 475 aa5.51□□□□□ -1.53
PTPRD-202ENST00000356435 ING4Q9UNL4 249 aa5.51□□□□□ -1.53
PTPRD-202ENST00000356435 ZNF879B4DU55 563 aa5.51□□□□□ -1.53
PTPRD-202ENST00000356435 TEX46H3BTG2 121 aa5.51□□□□□ -1.53
PTPRD-202ENST00000356435 AZIN1O14977 448 aa5.51□□□□□ -1.53
PTPRD-202ENST00000356435 ENTPD5O75356 428 aa5.51□□□□□ -1.53
PTPRD-202ENST00000356435 ZCCHC18P0CG32 403 aa5.51□□□□□ -1.53
PTPRD-202ENST00000356435 CTSOP43234 321 aaPredicted RBP5.51□□□□□ -1.53
PTPRD-202ENST00000356435 CAP1Q01518 475 aa5.51□□□□□ -1.53
PTPRD-202ENST00000356435 WDR45BQ5MNZ6 344 aa5.51□□□□□ -1.53
PTPRD-202ENST00000356435 PRAMEF19Q5SWL8 479 aa5.51□□□□□ -1.53
PTPRD-202ENST00000356435 ARHGAP36Q6ZRI8 547 aa5.51□□□□□ -1.53
PTPRD-202ENST00000356435 CCDC36Q8IYA8 594 aa5.51□□□□□ -1.53
PTPRD-202ENST00000356435 ATP6V1C2Q8NEY4 427 aa5.51□□□□□ -1.53
PTPRD-202ENST00000356435 RBM18Q96H35 190 aaKnown RBP5.51□□□□□ -1.53
PTPRD-202ENST00000356435 OR52E6Q96RD3 313 aa5.51□□□□□ -1.53
PTPRD-202ENST00000356435 DDX18Q9NVP1 670 aaKnown RBP5.51□□□□□ -1.53
PTPRD-202ENST00000356435 PEAK1Q9H792 1746 aa5.51□□□□□ -1.53
PTPRD-202ENST00000356435 TCRBV5S4A2TA0A5A2 114 aa5.51□□□□□ -1.53
PTPRD-202ENST00000356435 SNAP91O60641 907 aa5.51□□□□□ -1.53
PTPRD-202ENST00000356435 PAGE1O75459 146 aa5.51□□□□□ -1.53
PTPRD-202ENST00000356435 SEMA3DO95025 777 aa5.51□□□□□ -1.53
PTPRD-202ENST00000356435 LRATO95237 230 aa5.51□□□□□ -1.53
PTPRD-202ENST00000356435 UGT2B4P06133 528 aa5.51□□□□□ -1.53
PTPRD-202ENST00000356435 PIM1P11309 404 aaPredicted RBP5.51□□□□□ -1.53
PTPRD-202ENST00000356435 DDX6P26196 483 aaKnown RBP eCLIP5.51□□□□□ -1.53
PTPRD-202ENST00000356435 CORO1AP31146 461 aaKnown RBP5.51□□□□□ -1.53
PTPRD-202ENST00000356435 MATKP42679 507 aa5.51□□□□□ -1.53
PTPRD-202ENST00000356435 SLC34A1Q06495 639 aa5.51□□□□□ -1.53
PTPRD-202ENST00000356435 SAMD14Q8IZD0 417 aaPredicted RBP5.51□□□□□ -1.53
PTPRD-202ENST00000356435 FBXO25Q8TCJ0 367 aa5.51□□□□□ -1.53
PTPRD-202ENST00000356435 ACOT12Q8WYK0 555 aa5.51□□□□□ -1.53
PTPRD-202ENST00000356435 NDNQ99608 321 aa5.51□□□□□ -1.53
PTPRD-202ENST00000356435 GPR20Q99678 358 aa5.51□□□□□ -1.53
PTPRD-202ENST00000356435 CDH19Q9H159 772 aa5.51□□□□□ -1.53
PTPRD-202ENST00000356435 ZNF222Q9UK12 451 aa5.51□□□□□ -1.53
PTPRD-202ENST00000356435 IKZF2Q9UKS7 526 aa5.51□□□□□ -1.53
PTPRD-202ENST00000356435 DMTF1Q9Y222 760 aa5.51□□□□□ -1.53
PTPRD-202ENST00000356435 SAMHD1Q9Y3Z3 626 aaKnown RBP5.51□□□□□ -1.53
PTPRD-202ENST00000356435 AKAP12Q02952 1782 aa5.51□□□□□ -1.53
PTPRD-202ENST00000356435 BBIP1A8MTZ0 92 aa5.51□□□□□ -1.53
PTPRD-202ENST00000356435 ANKRD63C9JTQ0 380 aa5.51□□□□□ -1.53
PTPRD-202ENST00000356435 GNALP38405 381 aa5.51□□□□□ -1.53
PTPRD-202ENST00000356435 MLLT3P42568 568 aaPredicted RBP5.51□□□□□ -1.53
PTPRD-202ENST00000356435 AAK1Q2M2I8 961 aa5.51□□□□□ -1.53
PTPRD-202ENST00000356435 C9orf57Q5W0N0 161 aa5.51□□□□□ -1.53
PTPRD-202ENST00000356435 APOBEC3HQ6NTF7 200 aaKnown RBP5.51□□□□□ -1.53
PTPRD-202ENST00000356435 PTF1AQ7RTS3 328 aa5.51□□□□□ -1.53
PTPRD-202ENST00000356435 RASGRP3Q8IV61 690 aa5.51□□□□□ -1.53
PTPRD-202ENST00000356435 ZNF540Q8NDQ6 660 aa5.51□□□□□ -1.53
PTPRD-202ENST00000356435 CD99L2Q8TCZ2 262 aa5.51□□□□□ -1.53
PTPRD-202ENST00000356435 IRGQQ8WZA9 623 aa5.51□□□□□ -1.53
PTPRD-202ENST00000356435 COPS5Q92905 334 aa5.51□□□□□ -1.53
PTPRD-202ENST00000356435 MBOAT7Q96N66 472 aa5.51□□□□□ -1.53
PTPRD-202ENST00000356435 FAM105AQ9NUU6 356 aa5.51□□□□□ -1.53
PTPRD-202ENST00000356435 MAGEL2Q9UJ55 1249 aa5.51□□□□□ -1.53
PTPRD-202ENST00000356435 SAMD4AQ9UPU9 718 aaKnown RBP5.51□□□□□ -1.53
PTPRD-202ENST00000356435 BTRCQ9Y297 605 aa5.51□□□□□ -1.53
PTPRD-202ENST00000356435 MEGF6O75095 1541 aa5.51□□□□□ -1.53
PTPRD-202ENST00000356435 TMEM150BA6NC51 233 aa5.51□□□□□ -1.53
PTPRD-202ENST00000356435 HAT1O14929 419 aa5.51□□□□□ -1.53
PTPRD-202ENST00000356435 SEPT4O43236 478 aa5.51□□□□□ -1.53
PTPRD-202ENST00000356435 GMFGO60234 142 aa5.51□□□□□ -1.53
PTPRD-202ENST00000356435 PEX11AO75192 247 aa5.51□□□□□ -1.53
PTPRD-202ENST00000356435 ADSSP30520 456 aa5.51□□□□□ -1.53
PTPRD-202ENST00000356435 GRIA4P48058 902 aa5.51□□□□□ -1.53
PTPRD-202ENST00000356435 DGKGP49619 791 aa5.51□□□□□ -1.53
PTPRD-202ENST00000356435 DDX59Q5T1V6 619 aaKnown RBP eCLIP5.51□□□□□ -1.53
PTPRD-202ENST00000356435 SMYD5Q6GMV2 418 aa5.51□□□□□ -1.53
PTPRD-202ENST00000356435 ARCQ7LC44 396 aa5.51□□□□□ -1.53
PTPRD-202ENST00000356435 LRRC17Q8N6Y2 441 aa5.51□□□□□ -1.53
PTPRD-202ENST00000356435 FBXO15Q8NCQ5 510 aaPredicted RBP5.51□□□□□ -1.53
PTPRD-202ENST00000356435 TRPV1Q8NER1 839 aa5.51□□□□□ -1.53
PTPRD-202ENST00000356435 PIGXQ8TBF5 258 aa5.51□□□□□ -1.53
PTPRD-202ENST00000356435 WFIKKN2Q8TEU8 576 aa5.51□□□□□ -1.53
PTPRD-202ENST00000356435 EZH1Q92800 747 aaPredicted RBP5.51□□□□□ -1.53
PTPRD-202ENST00000356435 ACDQ96AP0 544 aa5.51□□□□□ -1.53
PTPRD-202ENST00000356435 DGCR6LQ9BY27 220 aa5.51□□□□□ -1.53
PTPRD-202ENST00000356435 C11orf49Q9H6J7 331 aa5.51□□□□□ -1.53
PTPRD-202ENST00000356435 LGALS13Q9UHV8 139 aa5.51□□□□□ -1.53
PTPRD-202ENST00000356435 ROBO3Q96MS0 1386 aa5.5□□□□□ -1.53
PTPRD-202ENST00000356435 SPATA31C2B4DYI2 1134 aa5.5□□□□□ -1.53
PTPRD-202ENST00000356435 RFXANKO14593 260 aa5.5□□□□□ -1.53
PTPRD-202ENST00000356435 PGRMC2O15173 223 aa5.5□□□□□ -1.53
PTPRD-202ENST00000356435 BUD23O43709 281 aaKnown RBP5.5□□□□□ -1.53
PTPRD-202ENST00000356435 PAPSS2O95340 614 aaPredicted RBP5.5□□□□□ -1.53
PTPRD-202ENST00000356435 ASLP04424 464 aa5.5□□□□□ -1.53
PTPRD-202ENST00000356435 SNRPB2P08579 225 aaKnown RBP5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms