RNA–Protein interactions for RNA: ENST00000348495.10

SSBP4-202, Transcript of single stranded DNA binding protein 4, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SSBP4, Length 1,721 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-202ENST00000348495 PGM2Q96G03 612 aa26.85■■□□□ 1.89
SSBP4-202ENST00000348495 VPS39Q96JC1 886 aa26.85■■□□□ 1.89
SSBP4-202ENST00000348495 LENG8Q96PV6 779 aaPredicted RBP26.85■■□□□ 1.89
SSBP4-202ENST00000348495 GPR174Q9BXC1 333 aa26.85■■□□□ 1.89
SSBP4-202ENST00000348495 C1QTNF7Q9BXJ2 289 aa26.85■■□□□ 1.89
SSBP4-202ENST00000348495 TMBIM4Q9HC24 238 aa26.85■■□□□ 1.89
SSBP4-202ENST00000348495 MBNL1Q9NR56 388 aaKnown RBP26.85■■□□□ 1.89
SSBP4-202ENST00000348495 TBK1Q9UHD2 729 aa26.85■■□□□ 1.89
SSBP4-202ENST00000348495 VPS9D1Q9Y2B5 631 aa26.85■■□□□ 1.89
SSBP4-202ENST00000348495 IGHV4-34P06331 123 aa26.84■■□□□ 1.89
SSBP4-202ENST00000348495 PYGLP06737 847 aa26.84■■□□□ 1.89
SSBP4-202ENST00000348495 ITGA2BP08514 1039 aa26.84■■□□□ 1.89
SSBP4-202ENST00000348495 MYZAPP0CAP1 466 aa26.84■■□□□ 1.89
SSBP4-202ENST00000348495 CNTFP26441 200 aa26.84■■□□□ 1.89
SSBP4-202ENST00000348495 TEAD1P28347 426 aa26.84■■□□□ 1.89
SSBP4-202ENST00000348495 SPRP35270 261 aaPredicted RBP26.84■■□□□ 1.89
SSBP4-202ENST00000348495 IRF4Q15306 451 aa26.84■■□□□ 1.89
SSBP4-202ENST00000348495 TNFAIP8L3Q5GJ75 292 aa26.84■■□□□ 1.89
SSBP4-202ENST00000348495 GPRC6AQ5T6X5 926 aa26.84■■□□□ 1.89
SSBP4-202ENST00000348495 KIAA0895LQ68EN5 471 aa26.84■■□□□ 1.89
SSBP4-202ENST00000348495 TSSK4Q6SA08 328 aa26.84■■□□□ 1.89
SSBP4-202ENST00000348495 FBXL6Q8N531 539 aa26.84■■□□□ 1.89
SSBP4-202ENST00000348495 GLYATL1Q969I3 302 aa26.84■■□□□ 1.89
SSBP4-202ENST00000348495 ZDHHC3Q9NYG2 299 aa26.84■■□□□ 1.89
SSBP4-202ENST00000348495 MBD1Q9UIS9 605 aaPredicted RBP26.84■■□□□ 1.89
SSBP4-202ENST00000348495 EML5Q05BV3 1969 aa26.83■■□□□ 1.89
SSBP4-202ENST00000348495 OR1I1O60431 355 aa26.83■■□□□ 1.89
SSBP4-202ENST00000348495 NDUFS3O75489 264 aa26.83■■□□□ 1.89
SSBP4-202ENST00000348495 PPARGP37231 505 aaPredicted RBP26.83■■□□□ 1.89
SSBP4-202ENST00000348495 PTGER3P43115 390 aa26.83■■□□□ 1.89
SSBP4-202ENST00000348495 GPR1P46091 355 aa26.83■■□□□ 1.89
SSBP4-202ENST00000348495 ADARP55265 1226 aaKnown RBP26.83■■□□□ 1.89
SSBP4-202ENST00000348495 ITIH4Q14624 930 aa26.83■■□□□ 1.89
SSBP4-202ENST00000348495 RAET1GQ6H3X3 334 aa26.83■■□□□ 1.89
SSBP4-202ENST00000348495 ADAMTSL4Q6UY14 1074 aa26.83■■□□□ 1.89
SSBP4-202ENST00000348495 C1orf210Q8IVY1 113 aa26.83■■□□□ 1.89
SSBP4-202ENST00000348495 DDHD1Q8NEL9 900 aa26.83■■□□□ 1.89
SSBP4-202ENST00000348495 CCDC97Q96F63 343 aaPredicted RBP26.83■■□□□ 1.89
SSBP4-202ENST00000348495 TTC1Q99614 292 aa26.83■■□□□ 1.89
SSBP4-202ENST00000348495 CRYL1Q9Y2S2 319 aa26.83■■□□□ 1.89
SSBP4-202ENST00000348495 PFDN6O15212 129 aa26.82■■□□□ 1.88
SSBP4-202ENST00000348495 LAMTOR5O43504 91 aa26.82■■□□□ 1.88
SSBP4-202ENST00000348495 KRT38O76015 456 aa26.82■■□□□ 1.88
SSBP4-202ENST00000348495 TMED2Q15363 201 aa26.82■■□□□ 1.88
SSBP4-202ENST00000348495 DTWD2Q8NBA8 298 aa26.82■■□□□ 1.88
SSBP4-202ENST00000348495 PKNOX2Q96KN3 472 aa26.82■■□□□ 1.88
SSBP4-202ENST00000348495 GPR22Q99680 433 aa26.82■■□□□ 1.88
SSBP4-202ENST00000348495 P2RY12Q9H244 342 aa26.82■■□□□ 1.88
SSBP4-202ENST00000348495 EPHX3Q9H6B9 360 aa26.82■■□□□ 1.88
SSBP4-202ENST00000348495 MTO1Q9Y2Z2 717 aaKnown RBP26.82■■□□□ 1.88
SSBP4-202ENST00000348495 IQANK1A0A1B0GTG1 560 aa26.82■■□□□ 1.88
SSBP4-202ENST00000348495 SLC31A1O15431 190 aa26.82■■□□□ 1.88
SSBP4-202ENST00000348495 OPA1O60313 960 aa26.82■■□□□ 1.88
SSBP4-202ENST00000348495 KRT37O76014 449 aa26.82■■□□□ 1.88
SSBP4-202ENST00000348495 PCCBP05166 539 aa26.82■■□□□ 1.88
SSBP4-202ENST00000348495 TRIM23P36406 574 aa26.82■■□□□ 1.88
SSBP4-202ENST00000348495 ILF2Q12905 390 aaKnown RBP26.82■■□□□ 1.88
SSBP4-202ENST00000348495 BMPR2Q13873 1038 aa26.82■■□□□ 1.88
SSBP4-202ENST00000348495 USP39Q53GS9 565 aaKnown RBP26.82■■□□□ 1.88
SSBP4-202ENST00000348495 LGSNQ5TDP6 509 aa26.82■■□□□ 1.88
SSBP4-202ENST00000348495 ZNF549Q6P9A3 640 aa26.82■■□□□ 1.88
SSBP4-202ENST00000348495 TAOK1Q7L7X3 1001 aa26.82■■□□□ 1.88
SSBP4-202ENST00000348495 RBFAQ8N0V3 343 aa26.82■■□□□ 1.88
SSBP4-202ENST00000348495 CNPY4Q8N129 248 aa26.82■■□□□ 1.88
SSBP4-202ENST00000348495 DENND6BQ8NEG7 585 aa26.82■■□□□ 1.88
SSBP4-202ENST00000348495 ATXN7L3BQ96GX2 97 aa26.82■■□□□ 1.88
SSBP4-202ENST00000348495 BIRC8Q96P09 236 aa26.82■■□□□ 1.88
SSBP4-202ENST00000348495 COPS8Q99627 209 aa26.82■■□□□ 1.88
SSBP4-202ENST00000348495 BOCQ9BWV1 1114 aa26.82■■□□□ 1.88
SSBP4-202ENST00000348495 PCED1AQ9H1Q7 454 aa26.82■■□□□ 1.88
SSBP4-202ENST00000348495 EBF2Q9HAK2 575 aa26.82■■□□□ 1.88
SSBP4-202ENST00000348495 CORO1CQ9ULV4 474 aaPredicted RBP26.82■■□□□ 1.88
SSBP4-202ENST00000348495 GOLGA6L10A6NI86 522 aa26.81■■□□□ 1.88
SSBP4-202ENST00000348495 SYF2O95926 243 aaKnown RBP26.81■■□□□ 1.88
SSBP4-202ENST00000348495 SNRPAP09012 282 aaKnown RBP26.81■■□□□ 1.88
SSBP4-202ENST00000348495 IGFALSP35858 605 aa26.81■■□□□ 1.88
SSBP4-202ENST00000348495 B4GALNT1Q00973 533 aa26.81■■□□□ 1.88
SSBP4-202ENST00000348495 MROH9Q5TGP6 573 aa26.81■■□□□ 1.88
SSBP4-202ENST00000348495 ACVR1CQ8NER5 493 aa26.81■■□□□ 1.88
SSBP4-202ENST00000348495 BIRC7Q96CA5 298 aa26.81■■□□□ 1.88
SSBP4-202ENST00000348495 INVSQ9Y283 1065 aa26.81■■□□□ 1.88
SSBP4-202ENST00000348495 RGS16O15492 202 aaPredicted RBP26.8■■□□□ 1.88
SSBP4-202ENST00000348495 RPS3P23396 243 aaKnown RBP eCLIP26.8■■□□□ 1.88
SSBP4-202ENST00000348495 INPP5AQ14642 412 aa26.8■■□□□ 1.88
SSBP4-202ENST00000348495 KHDC1Q4VXA5 237 aaKnown RBP26.8■■□□□ 1.88
SSBP4-202ENST00000348495 LDLRAP1Q5SW96 308 aa26.8■■□□□ 1.88
SSBP4-202ENST00000348495 ARL8AQ96BM9 186 aa26.8■■□□□ 1.88
SSBP4-202ENST00000348495 MTBPQ96DY7 904 aa26.8■■□□□ 1.88
SSBP4-202ENST00000348495 COX14Q96I36 57 aa26.8■■□□□ 1.88
SSBP4-202ENST00000348495 SPACA7Q96KW9 195 aa26.8■■□□□ 1.88
SSBP4-202ENST00000348495 TEX101Q9BY14 249 aa26.8■■□□□ 1.88
SSBP4-202ENST00000348495 FZD3Q9NPG1 666 aa26.8■■□□□ 1.88
SSBP4-202ENST00000348495 ZBTB32Q9Y2Y4 487 aaPredicted RBP26.8■■□□□ 1.88
SSBP4-202ENST00000348495 TRIM49D1C9J1S8 452 aa26.79■■□□□ 1.88
SSBP4-202ENST00000348495 PRMT5O14744 637 aaPredicted RBP26.79■■□□□ 1.88
SSBP4-202ENST00000348495 INPP4BO15327 924 aa26.79■■□□□ 1.88
SSBP4-202ENST00000348495 ZNF7P17097 686 aaPredicted RBP26.79■■□□□ 1.88
SSBP4-202ENST00000348495 RBM20Q5T481 1227 aaKnown RBP26.79■■□□□ 1.88
SSBP4-202ENST00000348495 PHYKPLQ8IUZ5 450 aa26.79■■□□□ 1.88
SSBP4-202ENST00000348495 DCLK2Q8N568 766 aa26.79■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms