RNA–Protein interactions for RNA: ENST00000344626.8

SMARCA4-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 1 (best) BASIC

Gene SMARCA4, Length 5,392 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-201ENST00000344626 PLEKHO2Q8TD55 490 aa16.3■□□□□ 0.2
SMARCA4-201ENST00000344626 PHF21AQ96BD5 680 aa16.3■□□□□ 0.2
SMARCA4-201ENST00000344626 OR2AG1Q9H205 316 aa16.3■□□□□ 0.2
SMARCA4-201ENST00000344626 FAM220BPB1ANY3 271 aa16.3■□□□□ 0.2
SMARCA4-201ENST00000344626 GOT2P00505 430 aaKnown RBP16.3■□□□□ 0.2
SMARCA4-201ENST00000344626 HOXD13P35453 343 aa16.3■□□□□ 0.2
SMARCA4-201ENST00000344626 CCNFP41002 786 aa16.3■□□□□ 0.2
SMARCA4-201ENST00000344626 C9orf50Q5SZB4 431 aa16.3■□□□□ 0.2
SMARCA4-201ENST00000344626 UBXN11Q5T124 520 aa16.3■□□□□ 0.2
SMARCA4-201ENST00000344626 TTC29Q8NA56 475 aaPredicted RBP16.3■□□□□ 0.2
SMARCA4-201ENST00000344626 CRYGNQ8WXF5 182 aa16.3■□□□□ 0.2
SMARCA4-201ENST00000344626 KRT84Q9NSB2 600 aa16.3■□□□□ 0.2
SMARCA4-201ENST00000344626 HAO1Q9UJM8 370 aa16.3■□□□□ 0.2
SMARCA4-201ENST00000344626 M0R3G1 203 aa16.29■□□□□ 0.2
SMARCA4-201ENST00000344626 MMP20O60882 483 aa16.29■□□□□ 0.2
SMARCA4-201ENST00000344626 ERVFC1P60507 584 aa16.29■□□□□ 0.2
SMARCA4-201ENST00000344626 VAC14Q08AM6 782 aa16.29■□□□□ 0.2
SMARCA4-201ENST00000344626 PDE1CQ14123 709 aaPredicted RBP16.29■□□□□ 0.2
SMARCA4-201ENST00000344626 MYLK3Q32MK0 819 aa16.29■□□□□ 0.2
SMARCA4-201ENST00000344626 LSM12Q3MHD2 195 aaKnown RBP16.29■□□□□ 0.2
SMARCA4-201ENST00000344626 LRRC23Q53EV4 343 aaPredicted RBP16.29■□□□□ 0.2
SMARCA4-201ENST00000344626 CMASQ8NFW8 434 aaPredicted RBP16.29■□□□□ 0.2
SMARCA4-201ENST00000344626 PROX1Q92786 737 aa16.29■□□□□ 0.2
SMARCA4-201ENST00000344626 SLC2A4RGQ9NR83 387 aa16.29■□□□□ 0.2
SMARCA4-201ENST00000344626 INTS10Q9NVR2 710 aaKnown RBP16.29■□□□□ 0.2
SMARCA4-201ENST00000344626 NUDT4Q9NZJ9 180 aa16.29■□□□□ 0.2
SMARCA4-201ENST00000344626 OR10H1Q9Y4A9 318 aa16.29■□□□□ 0.2
SMARCA4-201ENST00000344626 KDELR3O43731 214 aa16.29■□□□□ 0.2
SMARCA4-201ENST00000344626 COPZ1P61923 177 aa16.29■□□□□ 0.2
SMARCA4-201ENST00000344626 MINDY4Q4G0A6 757 aa16.29■□□□□ 0.2
SMARCA4-201ENST00000344626 SNX20Q7Z614 316 aa16.29■□□□□ 0.2
SMARCA4-201ENST00000344626 TSEN2Q8NCE0 465 aaKnown RBP16.29■□□□□ 0.2
SMARCA4-201ENST00000344626 MYCBPQ99417 103 aaPredicted RBP16.29■□□□□ 0.2
SMARCA4-201ENST00000344626 FKBPLQ9UIM3 349 aa16.29■□□□□ 0.2
SMARCA4-201ENST00000344626 NPEPPSL1A6NEC2 478 aa16.29■□□□□ 0.2
SMARCA4-201ENST00000344626 AZIN1O14977 448 aa16.29■□□□□ 0.2
SMARCA4-201ENST00000344626 TPST1O60507 370 aa16.29■□□□□ 0.2
SMARCA4-201ENST00000344626 ZNF23P17027 643 aa16.29■□□□□ 0.2
SMARCA4-201ENST00000344626 CPSF6Q16630 551 aaKnown RBP eCLIP16.29■□□□□ 0.2
SMARCA4-201ENST00000344626 XKR4Q5GH76 650 aa16.29■□□□□ 0.2
SMARCA4-201ENST00000344626 CYB5D1Q6P9G0 228 aa16.29■□□□□ 0.2
SMARCA4-201ENST00000344626 ZNF783Q6ZMS7 281 aa16.29■□□□□ 0.2
SMARCA4-201ENST00000344626 ANKRD33Q7Z3H0 272 aa16.29■□□□□ 0.2
SMARCA4-201ENST00000344626 TRIM69Q86WT6 500 aa16.29■□□□□ 0.2
SMARCA4-201ENST00000344626 FAM129CQ86XR2 697 aa16.29■□□□□ 0.2
SMARCA4-201ENST00000344626 TCEAL8Q8IYN2 117 aa16.29■□□□□ 0.2
SMARCA4-201ENST00000344626 SPPL2AQ8TCT8 520 aa16.29■□□□□ 0.2
SMARCA4-201ENST00000344626 SUSD2Q9UGT4 822 aa16.29■□□□□ 0.2
SMARCA4-201ENST00000344626 AJAP1Q9UKB5 411 aaPredicted RBP16.29■□□□□ 0.2
SMARCA4-201ENST00000344626 KRT75O95678 551 aa16.29■□□□□ 0.2
SMARCA4-201ENST00000344626 RING1Q06587 406 aa16.29■□□□□ 0.2
SMARCA4-201ENST00000344626 TMEM139Q8IV31 216 aa16.29■□□□□ 0.2
SMARCA4-201ENST00000344626 LMX1AQ8TE12 382 aa16.29■□□□□ 0.2
SMARCA4-201ENST00000344626 FIG4Q92562 907 aa16.29■□□□□ 0.2
SMARCA4-201ENST00000344626 GPR21Q99679 349 aa16.29■□□□□ 0.2
SMARCA4-201ENST00000344626 SPATA5L1Q9BVQ7 753 aa16.29■□□□□ 0.2
SMARCA4-201ENST00000344626 PCDHB11Q9Y5F2 797 aa16.29■□□□□ 0.2
SMARCA4-201ENST00000344626 FCHO1O14526 889 aa16.28■□□□□ 0.2
SMARCA4-201ENST00000344626 GABRDO14764 452 aa16.28■□□□□ 0.2
SMARCA4-201ENST00000344626 ZNF30P17039 623 aa16.28■□□□□ 0.2
SMARCA4-201ENST00000344626 PITRM1Q5JRX3 1037 aa16.28■□□□□ 0.2
SMARCA4-201ENST00000344626 ARMC5Q96C12 935 aa16.28■□□□□ 0.2
SMARCA4-201ENST00000344626 LMLNQ96KR4 655 aa16.28■□□□□ 0.2
SMARCA4-201ENST00000344626 NPY6RQ99463 290 aa16.28■□□□□ 0.2
SMARCA4-201ENST00000344626 CCDC177Q9NQR7 707 aaPredicted RBP16.28■□□□□ 0.2
SMARCA4-201ENST00000344626 CCDC167Q9P0B6 97 aa16.28■□□□□ 0.2
SMARCA4-201ENST00000344626 PAK4O96013 591 aaPredicted RBP16.28■□□□□ 0.2
SMARCA4-201ENST00000344626 C8GP07360 202 aa16.28■□□□□ 0.2
SMARCA4-201ENST00000344626 ENO2P09104 434 aaPredicted RBP16.28■□□□□ 0.2
SMARCA4-201ENST00000344626 VIPR1P32241 457 aa16.28■□□□□ 0.2
SMARCA4-201ENST00000344626 IFNGR2P38484 337 aa16.28■□□□□ 0.2
SMARCA4-201ENST00000344626 CCR4P51679 360 aa16.28■□□□□ 0.2
SMARCA4-201ENST00000344626 SQLEQ14534 574 aa16.28■□□□□ 0.2
SMARCA4-201ENST00000344626 ALG11Q2TAA5 492 aa16.28■□□□□ 0.2
SMARCA4-201ENST00000344626 PLEKHG6Q3KR16 790 aa16.28■□□□□ 0.2
SMARCA4-201ENST00000344626 CHMP1BQ7LBR1 199 aa16.28■□□□□ 0.2
SMARCA4-201ENST00000344626 TAS1R1Q7RTX1 841 aa16.28■□□□□ 0.2
SMARCA4-201ENST00000344626 C11orf74Q86VG3 221 aa16.28■□□□□ 0.2
SMARCA4-201ENST00000344626 GALNT4Q8N4A0 578 aa16.28■□□□□ 0.2
SMARCA4-201ENST00000344626 C1orf74Q96LT6 269 aa16.28■□□□□ 0.2
SMARCA4-201ENST00000344626 SGK2Q9HBY8 427 aa16.28■□□□□ 0.2
SMARCA4-201ENST00000344626 TMEM248Q9NWD8 314 aa16.28■□□□□ 0.2
SMARCA4-201ENST00000344626 SORCS3Q9UPU3 1222 aa16.28■□□□□ 0.2
SMARCA4-201ENST00000344626 TAF1P21675 1872 aa16.28■□□□□ 0.2
SMARCA4-201ENST00000344626 CCND1P24385 295 aa16.28■□□□□ 0.2
SMARCA4-201ENST00000344626 TBL3Q12788 808 aaKnown RBP16.28■□□□□ 0.2
SMARCA4-201ENST00000344626 RNASEH2BQ5TBB1 312 aaKnown RBP16.28■□□□□ 0.2
SMARCA4-201ENST00000344626 AMZ2Q86W34 360 aa16.28■□□□□ 0.2
SMARCA4-201ENST00000344626 ZSCAN5AQ9BUG6 496 aa16.28■□□□□ 0.2
SMARCA4-201ENST00000344626 ENOPH1Q9UHY7 261 aa16.28■□□□□ 0.2
SMARCA4-201ENST00000344626 PEX11AO75192 247 aa16.28■□□□□ 0.2
SMARCA4-201ENST00000344626 NDUFS1P28331 727 aa16.28■□□□□ 0.2
SMARCA4-201ENST00000344626 PNLIPRP1P54315 467 aa16.28■□□□□ 0.2
SMARCA4-201ENST00000344626 ZNF33AQ06730 810 aa16.28■□□□□ 0.2
SMARCA4-201ENST00000344626 LRRC36Q1X8D7 754 aa16.28■□□□□ 0.2
SMARCA4-201ENST00000344626 FAAH2Q6GMR7 532 aa16.28■□□□□ 0.2
SMARCA4-201ENST00000344626 GPR156Q8NFN8 814 aa16.28■□□□□ 0.2
SMARCA4-201ENST00000344626 SLC44A1Q8WWI5 657 aa16.28■□□□□ 0.2
SMARCA4-201ENST00000344626 RAD51AP1Q96B01 352 aa16.28■□□□□ 0.2
SMARCA4-201ENST00000344626 NUSAP1Q9BXS6 441 aaKnown RBP16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms