RNA–Protein interactions for RNA: ENST00000343599.5

ZNF540-202, Transcript of zinc finger protein 540, humanhuman

APPRIS P3 TSL 5 BASIC

Gene ZNF540, Length 3,073 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-202ENST00000343599 LRRC63Q05C16 580 aa7.31□□□□□ -1.24
ZNF540-202ENST00000343599 NR5A1Q13285 461 aa7.31□□□□□ -1.24
ZNF540-202ENST00000343599 DPYSQ14117 519 aa7.31□□□□□ -1.24
ZNF540-202ENST00000343599 SWI5Q1ZZU3 235 aa7.31□□□□□ -1.24
ZNF540-202ENST00000343599 C2orf27AQ580R0 203 aa7.31□□□□□ -1.24
ZNF540-202ENST00000343599 PKN3Q6P5Z2 889 aa7.31□□□□□ -1.24
ZNF540-202ENST00000343599 MACC1Q6ZN28 852 aa7.31□□□□□ -1.24
ZNF540-202ENST00000343599 RAPH1Q70E73 1250 aa7.31□□□□□ -1.24
ZNF540-202ENST00000343599 CLNKQ7Z7G1 428 aa7.31□□□□□ -1.24
ZNF540-202ENST00000343599 SPARTQ8N0X7 666 aa7.31□□□□□ -1.24
ZNF540-202ENST00000343599 LINC00469Q8N7U9 141 aa7.31□□□□□ -1.24
ZNF540-202ENST00000343599 FAM169BQ8N8A8 192 aa7.31□□□□□ -1.24
ZNF540-202ENST00000343599 ATAD1Q8NBU5 361 aa7.31□□□□□ -1.24
ZNF540-202ENST00000343599 ZNF398Q8TD17 642 aa7.31□□□□□ -1.24
ZNF540-202ENST00000343599 MGARPQ8TDB4 240 aa7.31□□□□□ -1.24
ZNF540-202ENST00000343599 PSKH2Q96QS6 385 aa7.31□□□□□ -1.24
ZNF540-202ENST00000343599 SEPT5Q99719 369 aaPredicted RBP7.31□□□□□ -1.24
ZNF540-202ENST00000343599 NUP85Q9BW27 656 aa7.31□□□□□ -1.24
ZNF540-202ENST00000343599 SHCBP1LQ9BZQ2 653 aa7.31□□□□□ -1.24
ZNF540-202ENST00000343599 IMPG2Q9BZV3 1241 aa7.31□□□□□ -1.24
ZNF540-202ENST00000343599 ARMC7Q9H6L4 198 aa7.31□□□□□ -1.24
ZNF540-202ENST00000343599 SIAEQ9HAT2 523 aa7.31□□□□□ -1.24
ZNF540-202ENST00000343599 CCDC177Q9NQR7 707 aaPredicted RBP7.31□□□□□ -1.24
ZNF540-202ENST00000343599 ZFP69BQ9UJL9 534 aa7.31□□□□□ -1.24
ZNF540-202ENST00000343599 OR51B4Q9Y5P0 310 aa7.31□□□□□ -1.24
ZNF540-202ENST00000343599 A0A1W2PQ72 361 aa7.31□□□□□ -1.24
ZNF540-202ENST00000343599 SYNDIG1LA6NDD5 238 aa7.31□□□□□ -1.24
ZNF540-202ENST00000343599 GOLGA8MH3BSY2 632 aa7.31□□□□□ -1.24
ZNF540-202ENST00000343599 GDF9O60383 454 aa7.31□□□□□ -1.24
ZNF540-202ENST00000343599 GUCY1B2O75343 617 aa7.31□□□□□ -1.24
ZNF540-202ENST00000343599 DNTTP04053 509 aa7.31□□□□□ -1.24
ZNF540-202ENST00000343599 CKMP06732 381 aa7.31□□□□□ -1.24
ZNF540-202ENST00000343599 TFPTP0C1Z6 253 aa7.31□□□□□ -1.24
ZNF540-202ENST00000343599 AKT2P31751 481 aa7.31□□□□□ -1.24
ZNF540-202ENST00000343599 KLK7P49862 253 aa7.31□□□□□ -1.24
ZNF540-202ENST00000343599 NR1H2P55055 460 aa7.31□□□□□ -1.24
ZNF540-202ENST00000343599 PFN3P60673 137 aa7.31□□□□□ -1.24
ZNF540-202ENST00000343599 B2MP61769 119 aa7.31□□□□□ -1.24
ZNF540-202ENST00000343599 NIPAL4Q0D2K0 466 aa7.31□□□□□ -1.24
ZNF540-202ENST00000343599 TAF10Q12962 218 aa7.31□□□□□ -1.24
ZNF540-202ENST00000343599 MPP2Q14168 576 aa7.31□□□□□ -1.24
ZNF540-202ENST00000343599 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.31□□□□□ -1.24
ZNF540-202ENST00000343599 TSSK4Q6SA08 328 aa7.31□□□□□ -1.24
ZNF540-202ENST00000343599 USP53Q70EK8 1073 aa7.31□□□□□ -1.24
ZNF540-202ENST00000343599 ARL14Q8N4G2 192 aa7.31□□□□□ -1.24
ZNF540-202ENST00000343599 MYCT1Q8N699 235 aa7.31□□□□□ -1.24
ZNF540-202ENST00000343599 CCDC89Q8N998 374 aa7.31□□□□□ -1.24
ZNF540-202ENST00000343599 ZMIZ2Q8NF64 920 aa7.31□□□□□ -1.24
ZNF540-202ENST00000343599 BRSK1Q8TDC3 778 aa7.31□□□□□ -1.24
ZNF540-202ENST00000343599 FRS2Q8WU20 508 aa7.31□□□□□ -1.24
ZNF540-202ENST00000343599 FAM172AQ8WUF8 416 aa7.31□□□□□ -1.24
ZNF540-202ENST00000343599 ARHGEF26Q96DR7 871 aa7.31□□□□□ -1.24
ZNF540-202ENST00000343599 SERPINB12Q96P63 405 aa7.31□□□□□ -1.24
ZNF540-202ENST00000343599 IP6K3Q96PC2 410 aa7.31□□□□□ -1.24
ZNF540-202ENST00000343599 C1QTNF2Q9BXJ5 285 aa7.31□□□□□ -1.24
ZNF540-202ENST00000343599 NUF2Q9BZD4 464 aa7.31□□□□□ -1.24
ZNF540-202ENST00000343599 ASPSCR1Q9BZE9 553 aa7.31□□□□□ -1.24
ZNF540-202ENST00000343599 KLC2Q9H0B6 622 aa7.31□□□□□ -1.24
ZNF540-202ENST00000343599 GNPTGQ9UJJ9 305 aa7.31□□□□□ -1.24
ZNF540-202ENST00000343599 PPM1HQ9ULR3 514 aa7.31□□□□□ -1.24
ZNF540-202ENST00000343599 TMEM184BQ9Y519 407 aaPredicted RBP7.31□□□□□ -1.24
ZNF540-202ENST00000343599 MAD1L1Q9Y6D9 718 aa7.31□□□□□ -1.24
ZNF540-202ENST00000343599 ATG2BQ96BY7 2078 aa7.3□□□□□ -1.24
ZNF540-202ENST00000343599 ANKRD63C9JTQ0 380 aa7.3□□□□□ -1.24
ZNF540-202ENST00000343599 MCF2LO15068 1137 aa7.3□□□□□ -1.24
ZNF540-202ENST00000343599 SGTAO43765 313 aa7.3□□□□□ -1.24
ZNF540-202ENST00000343599 PEX1O43933 1283 aa7.3□□□□□ -1.24
ZNF540-202ENST00000343599 HAUS5O94927 633 aa7.3□□□□□ -1.24
ZNF540-202ENST00000343599 DDX5P17844 614 aaKnown RBP7.3□□□□□ -1.24
ZNF540-202ENST00000343599 AMPD1P23109 780 aa7.3□□□□□ -1.24
ZNF540-202ENST00000343599 AFMP43652 599 aa7.3□□□□□ -1.24
ZNF540-202ENST00000343599 KRT6CP48668 564 aa7.3□□□□□ -1.24
ZNF540-202ENST00000343599 ATP6V0D1P61421 351 aa7.3□□□□□ -1.24
ZNF540-202ENST00000343599 CD300CQ08708 224 aa7.3□□□□□ -1.24
ZNF540-202ENST00000343599 ZNF234Q14588 700 aa7.3□□□□□ -1.24
ZNF540-202ENST00000343599 TRMT5Q32P41 509 aaKnown RBP7.3□□□□□ -1.24
ZNF540-202ENST00000343599 FUT11Q495W5 492 aa7.3□□□□□ -1.24
ZNF540-202ENST00000343599 SFT2D3Q587I9 215 aa7.3□□□□□ -1.24
ZNF540-202ENST00000343599 RABGAP1LQ5R372 815 aa7.3□□□□□ -1.24
ZNF540-202ENST00000343599 LY6G5CQ5SRR4 150 aa7.3□□□□□ -1.24
ZNF540-202ENST00000343599 AAGABQ6PD74 315 aa7.3□□□□□ -1.24
ZNF540-202ENST00000343599 ZDHHC24Q6UX98 284 aa7.3□□□□□ -1.24
ZNF540-202ENST00000343599 C4orf22Q6V702 233 aa7.3□□□□□ -1.24
ZNF540-202ENST00000343599 CLEC20AQ6ZU45 233 aa7.3□□□□□ -1.24
ZNF540-202ENST00000343599 USP49Q70CQ1 688 aa7.3□□□□□ -1.24
ZNF540-202ENST00000343599 ZNF677Q86XU0 584 aa7.3□□□□□ -1.24
ZNF540-202ENST00000343599 CADM3Q8N126 398 aa7.3□□□□□ -1.24
ZNF540-202ENST00000343599 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP7.3□□□□□ -1.24
ZNF540-202ENST00000343599 DCAF4L2Q8NA75 395 aa7.3□□□□□ -1.24
ZNF540-202ENST00000343599 POMGNT1Q8WZA1 660 aa7.3□□□□□ -1.24
ZNF540-202ENST00000343599 PIGKQ92643 395 aa7.3□□□□□ -1.24
ZNF540-202ENST00000343599 PLEKHA8Q96JA3 519 aa7.3□□□□□ -1.24
ZNF540-202ENST00000343599 BTN2A3PQ96KV6 586 aa7.3□□□□□ -1.24
ZNF540-202ENST00000343599 SMOQ99835 787 aa7.3□□□□□ -1.24
ZNF540-202ENST00000343599 SLC4A5Q9BY07 1137 aa7.3□□□□□ -1.24
ZNF540-202ENST00000343599 GRIP2Q9C0E4 1043 aa7.3□□□□□ -1.24
ZNF540-202ENST00000343599 CCL26Q9Y258 94 aa7.3□□□□□ -1.24
ZNF540-202ENST00000343599 LY6G6EA0A0G2JKS1 128 aa7.3□□□□□ -1.24
ZNF540-202ENST00000343599 VSTM5A8MXK1 200 aa7.3□□□□□ -1.24
ZNF540-202ENST00000343599 E9PMD0 336 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms