RNA–Protein interactions for RNA: ENST00000342887.1

CFAP54-201, Transcript of cilia and flagella associated protein 54, humanhuman

TSL 2

Gene CFAP54, Length 3,686 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP54-201ENST00000342887 SOCS2O14508 198 aa8.05□□□□□ -1.12
CFAP54-201ENST00000342887 NRP2O60462 931 aa8.05□□□□□ -1.12
CFAP54-201ENST00000342887 NDST3O95803 873 aa8.05□□□□□ -1.12
CFAP54-201ENST00000342887 C1RP00736 705 aa8.05□□□□□ -1.12
CFAP54-201ENST00000342887 ASLP04424 464 aa8.05□□□□□ -1.12
CFAP54-201ENST00000342887 SNRPB2P08579 225 aaKnown RBP8.05□□□□□ -1.12
CFAP54-201ENST00000342887 PAMP19021 973 aa8.05□□□□□ -1.12
CFAP54-201ENST00000342887 MSH3P20585 1137 aa8.05□□□□□ -1.12
CFAP54-201ENST00000342887 ACVRL1P37023 503 aa8.05□□□□□ -1.12
CFAP54-201ENST00000342887 EEFSECP57772 596 aaKnown RBP8.05□□□□□ -1.12
CFAP54-201ENST00000342887 BNIP2Q12982 314 aa8.05□□□□□ -1.12
CFAP54-201ENST00000342887 GRB7Q14451 532 aa8.05□□□□□ -1.12
CFAP54-201ENST00000342887 SYVN1Q86TM6 617 aa8.05□□□□□ -1.12
CFAP54-201ENST00000342887 TMEM199Q8N511 208 aa8.05□□□□□ -1.12
CFAP54-201ENST00000342887 CCNYQ8ND76 341 aa8.05□□□□□ -1.12
CFAP54-201ENST00000342887 C17orf50Q8WW18 174 aa8.05□□□□□ -1.12
CFAP54-201ENST00000342887 WBP2Q969T9 261 aa8.05□□□□□ -1.12
CFAP54-201ENST00000342887 FKBP10Q96AY3 582 aa8.05□□□□□ -1.12
CFAP54-201ENST00000342887 FAM149B1Q96BN6 582 aa8.05□□□□□ -1.12
CFAP54-201ENST00000342887 NPAS2Q99743 824 aa8.05□□□□□ -1.12
CFAP54-201ENST00000342887 TMEM79Q9BSE2 394 aa8.05□□□□□ -1.12
CFAP54-201ENST00000342887 OSBPL11Q9BXB4 747 aa8.05□□□□□ -1.12
CFAP54-201ENST00000342887 GPR62Q9BZJ7 368 aa8.05□□□□□ -1.12
CFAP54-201ENST00000342887 SCOCQ9UIL1 159 aa8.05□□□□□ -1.12
CFAP54-201ENST00000342887 ZNF711Q9Y462 761 aa8.05□□□□□ -1.12
CFAP54-201ENST00000342887 AP4B1Q9Y6B7 739 aa8.05□□□□□ -1.12
CFAP54-201ENST00000342887 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP8.05□□□□□ -1.12
CFAP54-201ENST00000342887 SGTAO43765 313 aa8.05□□□□□ -1.12
CFAP54-201ENST00000342887 CIB2O75838 187 aa8.05□□□□□ -1.12
CFAP54-201ENST00000342887 BAIAP3O94812 1187 aa8.05□□□□□ -1.12
CFAP54-201ENST00000342887 ESRRBO95718 433 aa8.05□□□□□ -1.12
CFAP54-201ENST00000342887 YWHAQP27348 245 aa8.05□□□□□ -1.12
CFAP54-201ENST00000342887 RPL5P46777 297 aaKnown RBP8.05□□□□□ -1.12
CFAP54-201ENST00000342887 KPNA2P52292 529 aaKnown RBP8.05□□□□□ -1.12
CFAP54-201ENST00000342887 KPNA1P52294 538 aaPredicted RBP8.05□□□□□ -1.12
CFAP54-201ENST00000342887 YWHAHQ04917 246 aaPredicted RBP8.05□□□□□ -1.12
CFAP54-201ENST00000342887 BOP1Q14137 746 aaKnown RBP8.05□□□□□ -1.12
CFAP54-201ENST00000342887 XAF1Q6GPH4 301 aa8.05□□□□□ -1.12
CFAP54-201ENST00000342887 CXCL17Q6UXB2 119 aa8.05□□□□□ -1.12
CFAP54-201ENST00000342887 RNF19BQ6ZMZ0 732 aa8.05□□□□□ -1.12
CFAP54-201ENST00000342887 SMYD1Q8NB12 490 aa8.05□□□□□ -1.12
CFAP54-201ENST00000342887 BHLHE22Q8NFJ8 381 aaPredicted RBP8.05□□□□□ -1.12
CFAP54-201ENST00000342887 RHBDF1Q96CC6 855 aa8.05□□□□□ -1.12
CFAP54-201ENST00000342887 DDX50Q9BQ39 737 aaKnown RBP8.05□□□□□ -1.12
CFAP54-201ENST00000342887 PSD2Q9BQI7 771 aa8.05□□□□□ -1.12
CFAP54-201ENST00000342887 CARS2Q9HA77 564 aaKnown RBP8.05□□□□□ -1.12
CFAP54-201ENST00000342887 IL21Q9HBE4 155 aa8.05□□□□□ -1.12
CFAP54-201ENST00000342887 MRPL40Q9NQ50 206 aaKnown RBP8.05□□□□□ -1.12
CFAP54-201ENST00000342887 IL17CQ9P0M4 197 aa8.05□□□□□ -1.12
CFAP54-201ENST00000342887 GMPR2Q9P2T1 348 aaKnown RBP8.05□□□□□ -1.12
CFAP54-201ENST00000342887 DMTF1Q9Y222 760 aa8.05□□□□□ -1.12
CFAP54-201ENST00000342887 PCDHB3Q9Y5E6 796 aa8.05□□□□□ -1.12
CFAP54-201ENST00000342887 PIKFYVEQ9Y2I7 2098 aa8.04□□□□□ -1.12
CFAP54-201ENST00000342887 GOLGA8QA0A0J9YX86 632 aa8.04□□□□□ -1.12
CFAP54-201ENST00000342887 GOLGA8OA6NCC3 632 aa8.04□□□□□ -1.12
CFAP54-201ENST00000342887 GOLGA8NF8WBI6 632 aa8.04□□□□□ -1.12
CFAP54-201ENST00000342887 EIF3FO00303 357 aaPredicted RBP8.04□□□□□ -1.12
CFAP54-201ENST00000342887 IFRD1O00458 451 aaPredicted RBP8.04□□□□□ -1.12
CFAP54-201ENST00000342887 PITPNM1O00562 1244 aa8.04□□□□□ -1.12
CFAP54-201ENST00000342887 SUPT3HO75486 399 aa8.04□□□□□ -1.12
CFAP54-201ENST00000342887 GFAPP14136 432 aa8.04□□□□□ -1.12
CFAP54-201ENST00000342887 TACR2P21452 398 aa8.04□□□□□ -1.12
CFAP54-201ENST00000342887 PCSK6P29122 969 aa8.04□□□□□ -1.12
CFAP54-201ENST00000342887 CD86P42081 329 aa8.04□□□□□ -1.12
CFAP54-201ENST00000342887 TBX4P57082 545 aa8.04□□□□□ -1.12
CFAP54-201ENST00000342887 PRKCQQ04759 706 aa8.04□□□□□ -1.12
CFAP54-201ENST00000342887 POLD3Q15054 466 aaPredicted RBP8.04□□□□□ -1.12
CFAP54-201ENST00000342887 SEPT7Q16181 437 aaKnown RBP8.04□□□□□ -1.12
CFAP54-201ENST00000342887 NFE2Q16621 373 aaPredicted RBP8.04□□□□□ -1.12
CFAP54-201ENST00000342887 FAM83EQ2M2I3 478 aa8.04□□□□□ -1.12
CFAP54-201ENST00000342887 RGMBQ6NW40 437 aa8.04□□□□□ -1.12
CFAP54-201ENST00000342887 TXNDC11Q6PKC3 985 aa8.04□□□□□ -1.12
CFAP54-201ENST00000342887 OR2T34Q8NGX1 318 aa8.04□□□□□ -1.12
CFAP54-201ENST00000342887 OR2T3Q8NH03 318 aa8.04□□□□□ -1.12
CFAP54-201ENST00000342887 DIS3LQ8TF46 1054 aaKnown RBP8.04□□□□□ -1.12
CFAP54-201ENST00000342887 CATSPER2Q96P56 530 aa8.04□□□□□ -1.12
CFAP54-201ENST00000342887 MCCC1Q96RQ3 725 aaPredicted RBP8.04□□□□□ -1.12
CFAP54-201ENST00000342887 ADAM2Q99965 735 aa8.04□□□□□ -1.12
CFAP54-201ENST00000342887 APOL2Q9BQE5 337 aa8.04□□□□□ -1.12
CFAP54-201ENST00000342887 NTMT1Q9BV86 223 aa8.04□□□□□ -1.12
CFAP54-201ENST00000342887 YTHDF1Q9BYJ9 559 aaKnown RBP8.04□□□□□ -1.12
CFAP54-201ENST00000342887 AP5M1Q9H0R1 490 aa8.04□□□□□ -1.12
CFAP54-201ENST00000342887 EML4Q9HC35 981 aaKnown RBP8.04□□□□□ -1.12
CFAP54-201ENST00000342887 UBP1Q9NZI7 540 aa8.04□□□□□ -1.12
CFAP54-201ENST00000342887 ARL5AQ9Y689 179 aa8.04□□□□□ -1.12
CFAP54-201ENST00000342887 REV3LO60673 3130 aa8.04□□□□□ -1.12
CFAP54-201ENST00000342887 ZNF840PA6NDX5 716 aa8.04□□□□□ -1.12
CFAP54-201ENST00000342887 C10orf142B7Z368 130 aa8.04□□□□□ -1.12
CFAP54-201ENST00000342887 GOLGA8TH3BQL2 631 aa8.04□□□□□ -1.12
CFAP54-201ENST00000342887 NRG2O14511 850 aaPredicted RBP8.04□□□□□ -1.12
CFAP54-201ENST00000342887 HGSO14964 777 aaPredicted RBP8.04□□□□□ -1.12
CFAP54-201ENST00000342887 CD3EAPO15446 510 aaKnown RBP8.04□□□□□ -1.12
CFAP54-201ENST00000342887 RSL1D1O76021 490 aaKnown RBP8.04□□□□□ -1.12
CFAP54-201ENST00000342887 HPRP00739 348 aa8.04□□□□□ -1.12
CFAP54-201ENST00000342887 ENO2P09104 434 aaPredicted RBP8.04□□□□□ -1.12
CFAP54-201ENST00000342887 HOXD11P31277 338 aaPredicted RBP8.04□□□□□ -1.12
CFAP54-201ENST00000342887 CA8P35219 290 aa8.04□□□□□ -1.12
CFAP54-201ENST00000342887 RFC2P35250 354 aa8.04□□□□□ -1.12
CFAP54-201ENST00000342887 CDK9P50750 372 aaKnown RBP8.04□□□□□ -1.12
CFAP54-201ENST00000342887 LCP2Q13094 533 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms