RNA–Protein interactions for RNA: ENST00000341372.7

TPM3-207, Transcript of tropomyosin 3, humanhuman

TSL 5 BASIC

Gene TPM3, Length 2,007 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-207ENST00000341372 TLDC1Q6P9B6 456 aa10.29□□□□□ -0.76
TPM3-207ENST00000341372 SYCE1Q8N0S2 351 aa10.29□□□□□ -0.76
TPM3-207ENST00000341372 RNF10Q8N5U6 811 aaKnown RBP10.29□□□□□ -0.76
TPM3-207ENST00000341372 MFSD2AQ8NA29 543 aa10.29□□□□□ -0.76
TPM3-207ENST00000341372 DENND6BQ8NEG7 585 aa10.29□□□□□ -0.76
TPM3-207ENST00000341372 FEM1CQ96JP0 617 aa10.29□□□□□ -0.76
TPM3-207ENST00000341372 SERAC1Q96JX3 654 aa10.29□□□□□ -0.76
TPM3-207ENST00000341372 IL12RB2Q99665 862 aa10.29□□□□□ -0.76
TPM3-207ENST00000341372 POLR1EQ9GZS1 481 aaKnown RBP10.29□□□□□ -0.76
TPM3-207ENST00000341372 GPR27Q9NS67 375 aa10.29□□□□□ -0.76
TPM3-207ENST00000341372 CAPN6Q9Y6Q1 641 aa10.29□□□□□ -0.76
TPM3-207ENST00000341372 MACROD2A1Z1Q3 448 aa10.29□□□□□ -0.76
TPM3-207ENST00000341372 FIGNL2A6NMB9 653 aa10.29□□□□□ -0.76
TPM3-207ENST00000341372 ATXN7O15265 892 aaPredicted RBP10.29□□□□□ -0.76
TPM3-207ENST00000341372 SHOXO15266 292 aa10.29□□□□□ -0.76
TPM3-207ENST00000341372 SMNDC1O75940 238 aaKnown RBP eCLIP10.29□□□□□ -0.76
TPM3-207ENST00000341372 PCDH8O95206 1070 aa10.29□□□□□ -0.76
TPM3-207ENST00000341372 KCNH1O95259 989 aa10.29□□□□□ -0.76
TPM3-207ENST00000341372 CER1O95813 267 aa10.29□□□□□ -0.76
TPM3-207ENST00000341372 CPP00450 1065 aa10.29□□□□□ -0.76
TPM3-207ENST00000341372 KRT10P13645 584 aa10.29□□□□□ -0.76
TPM3-207ENST00000341372 CCNB1P14635 433 aa10.29□□□□□ -0.76
TPM3-207ENST00000341372 HNRNPA2B1P22626 353 aaKnown RBP10.29□□□□□ -0.76
TPM3-207ENST00000341372 MMP12P39900 470 aa10.29□□□□□ -0.76
TPM3-207ENST00000341372 NAP1L1P55209 391 aaKnown RBP10.29□□□□□ -0.76
TPM3-207ENST00000341372 MAXP61244 160 aa10.29□□□□□ -0.76
TPM3-207ENST00000341372 ADCY2Q08462 1091 aa10.29□□□□□ -0.76
TPM3-207ENST00000341372 KIF19Q2TAC6 998 aa10.29□□□□□ -0.76
TPM3-207ENST00000341372 BROXQ5VW32 411 aa10.29□□□□□ -0.76
TPM3-207ENST00000341372 DENND5AQ6IQ26 1287 aa10.29□□□□□ -0.76
TPM3-207ENST00000341372 LAYNQ6UX15 382 aa10.29□□□□□ -0.76
TPM3-207ENST00000341372 NPNTQ6UXI9 565 aa10.29□□□□□ -0.76
TPM3-207ENST00000341372 BBS12Q6ZW61 710 aa10.29□□□□□ -0.76
TPM3-207ENST00000341372 USP53Q70EK8 1073 aa10.29□□□□□ -0.76
TPM3-207ENST00000341372 TTC7BQ86TV6 843 aa10.29□□□□□ -0.76
TPM3-207ENST00000341372 PTRH1Q86Y79 214 aaKnown RBP10.29□□□□□ -0.76
TPM3-207ENST00000341372 ALG3Q92685 438 aa10.29□□□□□ -0.76
TPM3-207ENST00000341372 LENG8Q96PV6 779 aaPredicted RBP10.29□□□□□ -0.76
TPM3-207ENST00000341372 LGMNQ99538 433 aa10.29□□□□□ -0.76
TPM3-207ENST00000341372 MYLK2Q9H1R3 596 aa10.29□□□□□ -0.76
TPM3-207ENST00000341372 NOD2Q9HC29 1040 aa10.29□□□□□ -0.76
TPM3-207ENST00000341372 NT5MQ9NPB1 228 aa10.29□□□□□ -0.76
TPM3-207ENST00000341372 HAUS2Q9NVX0 235 aa10.29□□□□□ -0.76
TPM3-207ENST00000341372 HEY1Q9Y5J3 304 aa10.29□□□□□ -0.76
TPM3-207ENST00000341372 MIF4GDA9UHW6 222 aaKnown RBP10.28□□□□□ -0.76
TPM3-207ENST00000341372 J3QL48 77 aa10.28□□□□□ -0.76
TPM3-207ENST00000341372 CST8O60676 142 aa10.28□□□□□ -0.76
TPM3-207ENST00000341372 PPM1BO75688 479 aa10.28□□□□□ -0.76
TPM3-207ENST00000341372 HLA-DQB2P05538 268 aa10.28□□□□□ -0.76
TPM3-207ENST00000341372 PRLRP16471 622 aa10.28□□□□□ -0.76
TPM3-207ENST00000341372 CAPN3P20807 821 aa10.28□□□□□ -0.76
TPM3-207ENST00000341372 ATXN3P54252 364 aaPredicted RBP10.28□□□□□ -0.76
TPM3-207ENST00000341372 RWDD2BP57060 319 aa10.28□□□□□ -0.76
TPM3-207ENST00000341372 NXPH1P58417 271 aa10.28□□□□□ -0.76
TPM3-207ENST00000341372 TRAF2Q12933 501 aa10.28□□□□□ -0.76
TPM3-207ENST00000341372 ZBTB17Q13105 803 aa10.28□□□□□ -0.76
TPM3-207ENST00000341372 SLC14A1Q13336 389 aa10.28□□□□□ -0.76
TPM3-207ENST00000341372 PDE1CQ14123 709 aaPredicted RBP10.28□□□□□ -0.76
TPM3-207ENST00000341372 ACAP2Q15057 778 aa10.28□□□□□ -0.76
TPM3-207ENST00000341372 PRKD1Q15139 912 aaPredicted RBP10.28□□□□□ -0.76
TPM3-207ENST00000341372 SLC45A4Q5BKX6 768 aa10.28□□□□□ -0.76
TPM3-207ENST00000341372 SLC35F1Q5T1Q4 408 aa10.28□□□□□ -0.76
TPM3-207ENST00000341372 GTF2IRD2BQ6EKJ0 949 aa10.28□□□□□ -0.76
TPM3-207ENST00000341372 GCNT7Q6ZNI0 430 aa10.28□□□□□ -0.76
TPM3-207ENST00000341372 BZW1Q7L1Q6 419 aaKnown RBP10.28□□□□□ -0.76
TPM3-207ENST00000341372 ABI3BPQ7Z7G0 1075 aa10.28□□□□□ -0.76
TPM3-207ENST00000341372 GTF2IRD2Q86UP8 949 aa10.28□□□□□ -0.76
TPM3-207ENST00000341372 OR2I1PQ8NGU4 316 aa10.28□□□□□ -0.76
TPM3-207ENST00000341372 ARRDC2Q8TBH0 407 aa10.28□□□□□ -0.76
TPM3-207ENST00000341372 KLF6Q99612 283 aaPredicted RBP10.28□□□□□ -0.76
TPM3-207ENST00000341372 GTPBP2Q9BX10 602 aaKnown RBP10.28□□□□□ -0.76
TPM3-207ENST00000341372 SLC17A9Q9BYT1 436 aa10.28□□□□□ -0.76
TPM3-207ENST00000341372 RBM22Q9NW64 420 aaKnown RBP eCLIP10.28□□□□□ -0.76
TPM3-207ENST00000341372 SNX11Q9Y5W9 270 aa10.28□□□□□ -0.76
TPM3-207ENST00000341372 APOC4-APOC2K7ER74 178 aa10.28□□□□□ -0.76
TPM3-207ENST00000341372 SPTBN2O15020 2390 aa10.28□□□□□ -0.76
TPM3-207ENST00000341372 DDX3YO15523 660 aaKnown RBP10.28□□□□□ -0.76
TPM3-207ENST00000341372 KRT86O43790 486 aa10.28□□□□□ -0.76
TPM3-207ENST00000341372 MAGEC1O60732 1142 aa10.28□□□□□ -0.76
TPM3-207ENST00000341372 OPHN1O60890 802 aa10.28□□□□□ -0.76
TPM3-207ENST00000341372 APOC2P02655 101 aa10.28□□□□□ -0.76
TPM3-207ENST00000341372 PECAM1P16284 738 aaPredicted RBP10.28□□□□□ -0.76
TPM3-207ENST00000341372 AKT2P31751 481 aa10.28□□□□□ -0.76
TPM3-207ENST00000341372 GPR3P46089 330 aa10.28□□□□□ -0.76
TPM3-207ENST00000341372 DYNLT1P63172 113 aa10.28□□□□□ -0.76
TPM3-207ENST00000341372 RALGDSQ12967 914 aa10.28□□□□□ -0.76
TPM3-207ENST00000341372 IHHQ14623 411 aa10.28□□□□□ -0.76
TPM3-207ENST00000341372 HLA-BQ31612 363 aa10.28□□□□□ -0.76
TPM3-207ENST00000341372 LRRC73Q5JTD7 316 aa10.28□□□□□ -0.76
TPM3-207ENST00000341372 CFAP58Q5T655 872 aa10.28□□□□□ -0.76
TPM3-207ENST00000341372 KYAT3Q6YP21 454 aaKnown RBP10.28□□□□□ -0.76
TPM3-207ENST00000341372 DBX2Q6ZNG2 339 aa10.28□□□□□ -0.76
TPM3-207ENST00000341372 PIP4P1Q86T03 277 aa10.28□□□□□ -0.76
TPM3-207ENST00000341372 OR2C3Q8N628 320 aa10.28□□□□□ -0.76
TPM3-207ENST00000341372 WDR89Q96FK6 387 aaPredicted RBP10.28□□□□□ -0.76
TPM3-207ENST00000341372 HES6Q96HZ4 224 aa10.28□□□□□ -0.76
TPM3-207ENST00000341372 SEMA3CQ99985 751 aa10.28□□□□□ -0.76
TPM3-207ENST00000341372 ERVMER34-1Q9H9K5 563 aa10.28□□□□□ -0.76
TPM3-207ENST00000341372 B4GALT6Q9UBX8 382 aa10.28□□□□□ -0.76
TPM3-207ENST00000341372 AMFRQ9UKV5 643 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms