RNA–Protein interactions for RNA: ENST00000340611.8

BRAT1-201, Transcript of BRCA1 associated ATM activator 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRAT1, Length 2,915 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-201ENST00000340611 DHRS4L2Q6PKH6 230 aa15.03■□□□□ -0
BRAT1-201ENST00000340611 C10orf107Q8IVU9 208 aa15.03■□□□□ -0
BRAT1-201ENST00000340611 ALDH16A1Q8IZ83 802 aa15.03■□□□□ -0
BRAT1-201ENST00000340611 FBXW8Q8N3Y1 598 aa15.03■□□□□ -0
BRAT1-201ENST00000340611 CCDC68Q9H2F9 335 aa15.03■□□□□ -0
BRAT1-201ENST00000340611 STK39Q9UEW8 545 aa15.03■□□□□ -0
BRAT1-201ENST00000340611 COL6A3P12111 3177 aa15.03■□□□□ -0
BRAT1-201ENST00000340611 HSFX4A0A1B0GTS1 333 aaPredicted RBP15.03■□□□□ -0
BRAT1-201ENST00000340611 HSFX3A0A1B0GWH4 333 aaPredicted RBP15.03■□□□□ -0
BRAT1-201ENST00000340611 SOBPA7XYQ1 873 aa15.03■□□□□ -0
BRAT1-201ENST00000340611 CBX4O00257 560 aa15.03■□□□□ -0
BRAT1-201ENST00000340611 MUSKO15146 869 aa15.03■□□□□ -0
BRAT1-201ENST00000340611 DDX5P17844 614 aaKnown RBP15.03■□□□□ -0
BRAT1-201ENST00000340611 MGAT1P26572 445 aa15.03■□□□□ -0
BRAT1-201ENST00000340611 AVPR1AP37288 418 aa15.03■□□□□ -0
BRAT1-201ENST00000340611 ZNF135P52742 658 aaPredicted RBP15.03■□□□□ -0
BRAT1-201ENST00000340611 MRPS22P82650 360 aaKnown RBP15.03■□□□□ -0
BRAT1-201ENST00000340611 PQLC1Q8N2U9 271 aa15.03■□□□□ -0
BRAT1-201ENST00000340611 PGBD5Q8N414 524 aa15.03■□□□□ -0
BRAT1-201ENST00000340611 SLC15A4Q8N697 577 aa15.03■□□□□ -0
BRAT1-201ENST00000340611 IPMKQ8NFU5 416 aa15.03■□□□□ -0
BRAT1-201ENST00000340611 PPP1R36Q96LQ0 422 aa15.03■□□□□ -0
BRAT1-201ENST00000340611 HAUS8Q9BT25 410 aa15.03■□□□□ -0
BRAT1-201ENST00000340611 SORCS3Q9UPU3 1222 aa15.03■□□□□ -0
BRAT1-201ENST00000340611 MATN3O15232 486 aa15.02■□□□□ -0
BRAT1-201ENST00000340611 ZNF23P17027 643 aa15.02■□□□□ -0
BRAT1-201ENST00000340611 CCNCP24863 283 aa15.02■□□□□ -0
BRAT1-201ENST00000340611 CHRNA4P43681 627 aa15.02■□□□□ -0
BRAT1-201ENST00000340611 TPTEP56180 551 aa15.02■□□□□ -0
BRAT1-201ENST00000340611 DSC2Q02487 901 aa15.02■□□□□ -0
BRAT1-201ENST00000340611 CDK18Q07002 472 aa15.02■□□□□ -0
BRAT1-201ENST00000340611 PPM1JQ5JR12 505 aa15.02■□□□□ -0
BRAT1-201ENST00000340611 FGD3Q5JSP0 725 aa15.02■□□□□ -0
BRAT1-201ENST00000340611 RNF219Q5W0B1 726 aaPredicted RBP15.02■□□□□ -0
BRAT1-201ENST00000340611 KBTBD6Q86V97 674 aa15.02■□□□□ -0
BRAT1-201ENST00000340611 FAM20CQ8IXL6 584 aa15.02■□□□□ -0
BRAT1-201ENST00000340611 CADM3Q8N126 398 aa15.02■□□□□ -0
BRAT1-201ENST00000340611 CLIP4Q8N3C7 705 aa15.02■□□□□ -0
BRAT1-201ENST00000340611 RNF148Q8N7C7 305 aa15.02■□□□□ -0
BRAT1-201ENST00000340611 CHPT1Q8WUD6 406 aa15.02■□□□□ -0
BRAT1-201ENST00000340611 USP13Q92995 863 aaPredicted RBP15.02■□□□□ -0
BRAT1-201ENST00000340611 IGSF9Q9P2J2 1179 aa15.02■□□□□ -0
BRAT1-201ENST00000340611 ST14Q9Y5Y6 855 aa15.02■□□□□ -0
BRAT1-201ENST00000340611 WASH4PA8MWX3 477 aa15.02□□□□□ -0.01
BRAT1-201ENST00000340611 TPP1O14773 563 aa15.02□□□□□ -0.01
BRAT1-201ENST00000340611 ZBTB14O43829 449 aa15.02□□□□□ -0.01
BRAT1-201ENST00000340611 C1RP00736 705 aa15.02□□□□□ -0.01
BRAT1-201ENST00000340611 PSMC3P17980 439 aa15.02□□□□□ -0.01
BRAT1-201ENST00000340611 PRKACBP22694 351 aa15.02□□□□□ -0.01
BRAT1-201ENST00000340611 PPP3CCP48454 512 aa15.02□□□□□ -0.01
BRAT1-201ENST00000340611 RPS3AP61247 264 aaKnown RBP15.02□□□□□ -0.01
BRAT1-201ENST00000340611 FXNQ16595 210 aa15.02□□□□□ -0.01
BRAT1-201ENST00000340611 TMTC4Q5T4D3 741 aa15.02□□□□□ -0.01
BRAT1-201ENST00000340611 CMTM8Q8IZV2 173 aa15.02□□□□□ -0.01
BRAT1-201ENST00000340611 SMG7Q92540 1137 aaKnown RBP15.02□□□□□ -0.01
BRAT1-201ENST00000340611 FAR2Q96K12 515 aa15.02□□□□□ -0.01
BRAT1-201ENST00000340611 SORT1Q99523 831 aa15.02□□□□□ -0.01
BRAT1-201ENST00000340611 ACSS2Q9NR19 701 aa15.02□□□□□ -0.01
BRAT1-201ENST00000340611 ZNF358Q9NW07 568 aa15.02□□□□□ -0.01
BRAT1-201ENST00000340611 MSRAQ9UJ68 235 aa15.02□□□□□ -0.01
BRAT1-201ENST00000340611 CCDC162PA2VCL2 907 aa15.01□□□□□ -0.01
BRAT1-201ENST00000340611 CFAP99D6REC4 459 aa15.01□□□□□ -0.01
BRAT1-201ENST00000340611 H0Y626 953 aa15.01□□□□□ -0.01
BRAT1-201ENST00000340611 AIM2O14862 343 aa15.01□□□□□ -0.01
BRAT1-201ENST00000340611 TRIM24O15164 1050 aa15.01□□□□□ -0.01
BRAT1-201ENST00000340611 NR4A2P43354 598 aa15.01□□□□□ -0.01
BRAT1-201ENST00000340611 CLK3P49761 638 aaKnown RBP15.01□□□□□ -0.01
BRAT1-201ENST00000340611 SERINC3Q13530 473 aa15.01□□□□□ -0.01
BRAT1-201ENST00000340611 CERCAMQ5T4B2 595 aa15.01□□□□□ -0.01
BRAT1-201ENST00000340611 CXorf57Q6NSI4 855 aaKnown RBP15.01□□□□□ -0.01
BRAT1-201ENST00000340611 GPR141Q7Z602 305 aa15.01□□□□□ -0.01
BRAT1-201ENST00000340611 SLC38A6Q8IZM9 456 aa15.01□□□□□ -0.01
BRAT1-201ENST00000340611 TNS4Q8IZW8 715 aa15.01□□□□□ -0.01
BRAT1-201ENST00000340611 TBC1D15Q8TC07 691 aa15.01□□□□□ -0.01
BRAT1-201ENST00000340611 CMTM5Q96DZ9 223 aa15.01□□□□□ -0.01
BRAT1-201ENST00000340611 TMA16Q96EY4 203 aaKnown RBP15.01□□□□□ -0.01
BRAT1-201ENST00000340611 LRRC3BQ96PB8 259 aa15.01□□□□□ -0.01
BRAT1-201ENST00000340611 CDH19Q9H159 772 aa15.01□□□□□ -0.01
BRAT1-201ENST00000340611 MUC3BQ9H195 1237 aa15.01□□□□□ -0.01
BRAT1-201ENST00000340611 ERVK-11Q9UQG0 969 aa15.01□□□□□ -0.01
BRAT1-201ENST00000340611 FAM159BA6NKW6 160 aa15.01□□□□□ -0.01
BRAT1-201ENST00000340611 CASQ2O14958 399 aaPredicted RBP15.01□□□□□ -0.01
BRAT1-201ENST00000340611 MYO1DO94832 1006 aa15.01□□□□□ -0.01
BRAT1-201ENST00000340611 ALDOAP04075 364 aaKnown RBP15.01□□□□□ -0.01
BRAT1-201ENST00000340611 RHOCP08134 193 aa15.01□□□□□ -0.01
BRAT1-201ENST00000340611 COX4I1P13073 169 aa15.01□□□□□ -0.01
BRAT1-201ENST00000340611 HOXD9P28356 352 aaPredicted RBP15.01□□□□□ -0.01
BRAT1-201ENST00000340611 PCLAFQ15004 111 aa15.01□□□□□ -0.01
BRAT1-201ENST00000340611 PGS1Q32NB8 556 aa15.01□□□□□ -0.01
BRAT1-201ENST00000340611 RARS2Q5T160 578 aaKnown RBP15.01□□□□□ -0.01
BRAT1-201ENST00000340611 GPR107Q5VW38 600 aa15.01□□□□□ -0.01
BRAT1-201ENST00000340611 Q6ZNB5 142 aa15.01□□□□□ -0.01
BRAT1-201ENST00000340611 KIAA2013Q8IYS2 634 aa15.01□□□□□ -0.01
BRAT1-201ENST00000340611 DNAAF3Q8N9W5 541 aa15.01□□□□□ -0.01
BRAT1-201ENST00000340611 TDRD5Q8NAT2 981 aaKnown RBP15.01□□□□□ -0.01
BRAT1-201ENST00000340611 SUN5Q8TC36 379 aa15.01□□□□□ -0.01
BRAT1-201ENST00000340611 PTCD2Q8WV60 388 aaKnown RBP15.01□□□□□ -0.01
BRAT1-201ENST00000340611 SIGLEC10Q96LC7 697 aa15.01□□□□□ -0.01
BRAT1-201ENST00000340611 CCDC138Q96M89 665 aa15.01□□□□□ -0.01
BRAT1-201ENST00000340611 TSGA13Q96PP4 275 aa15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms