RNA–Protein interactions for RNA: ENST00000339162.11

PDLIM2-203, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 2,226 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-203ENST00000339162 SIX3O95343 332 aaPredicted RBP22.26■■□□□ 1.15
PDLIM2-203ENST00000339162 CTSLP07711 333 aa22.26■■□□□ 1.15
PDLIM2-203ENST00000339162 ITGALP20701 1170 aa22.26■■□□□ 1.15
PDLIM2-203ENST00000339162 SPAM1P38567 509 aa22.26■■□□□ 1.15
PDLIM2-203ENST00000339162 ELF3P78545 371 aaPredicted RBP22.26■■□□□ 1.15
PDLIM2-203ENST00000339162 PDCD2Q16342 344 aaPredicted RBP22.26■■□□□ 1.15
PDLIM2-203ENST00000339162 PFKFB4Q16877 469 aa22.26■■□□□ 1.15
PDLIM2-203ENST00000339162 NAIF1Q69YI7 327 aaPredicted RBP22.26■■□□□ 1.15
PDLIM2-203ENST00000339162 SFTPA1Q8IWL2 248 aa22.26■■□□□ 1.15
PDLIM2-203ENST00000339162 HEPHQ9BQS7 1158 aa22.26■■□□□ 1.15
PDLIM2-203ENST00000339162 STN1Q9H668 368 aaKnown RBP22.26■■□□□ 1.15
PDLIM2-203ENST00000339162 CD84Q9UIB8 345 aa22.26■■□□□ 1.15
PDLIM2-203ENST00000339162 MSRAQ9UJ68 235 aa22.26■■□□□ 1.15
PDLIM2-203ENST00000339162 CRLS1Q9UJA2 301 aa22.26■■□□□ 1.15
PDLIM2-203ENST00000339162 HSFX4A0A1B0GTS1 333 aaPredicted RBP22.25■■□□□ 1.15
PDLIM2-203ENST00000339162 HSFX3A0A1B0GWH4 333 aaPredicted RBP22.25■■□□□ 1.15
PDLIM2-203ENST00000339162 NPEPPSL1A6NEC2 478 aa22.25■■□□□ 1.15
PDLIM2-203ENST00000339162 PRRT4C9JH25 899 aa22.25■■□□□ 1.15
PDLIM2-203ENST00000339162 SUPT7LO94864 414 aa22.25■■□□□ 1.15
PDLIM2-203ENST00000339162 ESR1P03372 595 aa22.25■■□□□ 1.15
PDLIM2-203ENST00000339162 ESRRAP11474 423 aaPredicted RBP22.25■■□□□ 1.15
PDLIM2-203ENST00000339162 MTHFD2P13995 350 aa22.25■■□□□ 1.15
PDLIM2-203ENST00000339162 NCF2P19878 526 aaPredicted RBP22.25■■□□□ 1.15
PDLIM2-203ENST00000339162 EPHA3P29320 983 aa22.25■■□□□ 1.15
PDLIM2-203ENST00000339162 SEL1L3Q68CR1 1132 aa22.25■■□□□ 1.15
PDLIM2-203ENST00000339162 PTGR2Q8N8N7 351 aaPredicted RBP22.25■■□□□ 1.15
PDLIM2-203ENST00000339162 KCNJ9Q92806 393 aa22.25■■□□□ 1.15
PDLIM2-203ENST00000339162 UTP4Q969X6 686 aaKnown RBP22.25■■□□□ 1.15
PDLIM2-203ENST00000339162 CNDP1Q96KN2 507 aa22.25■■□□□ 1.15
PDLIM2-203ENST00000339162 MCCC1Q96RQ3 725 aaPredicted RBP22.25■■□□□ 1.15
PDLIM2-203ENST00000339162 ATOH8Q96SQ7 321 aa22.25■■□□□ 1.15
PDLIM2-203ENST00000339162 DERL2Q9GZP9 239 aa22.25■■□□□ 1.15
PDLIM2-203ENST00000339162 PPIL1Q9Y3C6 166 aa22.25■■□□□ 1.15
PDLIM2-203ENST00000339162 BTN3A1O00481 513 aa22.25■■□□□ 1.15
PDLIM2-203ENST00000339162 HDAC3O15379 428 aa22.25■■□□□ 1.15
PDLIM2-203ENST00000339162 TSPAN12O95859 305 aa22.25■■□□□ 1.15
PDLIM2-203ENST00000339162 KRT72Q14CN4 511 aa22.25■■□□□ 1.15
PDLIM2-203ENST00000339162 GRAMD4Q6IC98 578 aa22.25■■□□□ 1.15
PDLIM2-203ENST00000339162 CYB5D1Q6P9G0 228 aa22.25■■□□□ 1.15
PDLIM2-203ENST00000339162 CERS6Q6ZMG9 384 aa22.25■■□□□ 1.15
PDLIM2-203ENST00000339162 PACS2Q86VP3 889 aa22.25■■□□□ 1.15
PDLIM2-203ENST00000339162 SLC22A9Q8IVM8 553 aa22.25■■□□□ 1.15
PDLIM2-203ENST00000339162 STK40Q8N2I9 435 aa22.25■■□□□ 1.15
PDLIM2-203ENST00000339162 KDM1BQ8NB78 822 aa22.25■■□□□ 1.15
PDLIM2-203ENST00000339162 PBXIP1Q96AQ6 731 aa22.25■■□□□ 1.15
PDLIM2-203ENST00000339162 LINGO1Q96FE5 620 aa22.25■■□□□ 1.15
PDLIM2-203ENST00000339162 CLPBQ9H078 707 aa22.25■■□□□ 1.15
PDLIM2-203ENST00000339162 TFB2MQ9H5Q4 396 aaKnown RBP22.25■■□□□ 1.15
PDLIM2-203ENST00000339162 RNF112Q9ULX5 631 aa22.25■■□□□ 1.15
PDLIM2-203ENST00000339162 NUP210Q8TEM1 1887 aaPredicted RBP22.24■■□□□ 1.15
PDLIM2-203ENST00000339162 NCF1BA6NI72 391 aaPredicted RBP22.24■■□□□ 1.15
PDLIM2-203ENST00000339162 NCF1CA8MVU1 366 aaPredicted RBP22.24■■□□□ 1.15
PDLIM2-203ENST00000339162 WASH3PC4AMC7 463 aa22.24■■□□□ 1.15
PDLIM2-203ENST00000339162 F8W8V4 182 aa22.24■■□□□ 1.15
PDLIM2-203ENST00000339162 HOXC11O43248 304 aaPredicted RBP22.24■■□□□ 1.15
PDLIM2-203ENST00000339162 SMIM24O75264 130 aa22.24■■□□□ 1.15
PDLIM2-203ENST00000339162 NCF1P14598 390 aaPredicted RBP22.24■■□□□ 1.15
PDLIM2-203ENST00000339162 IMPDH1P20839 514 aa22.24■■□□□ 1.15
PDLIM2-203ENST00000339162 ADARP55265 1226 aaKnown RBP22.24■■□□□ 1.15
PDLIM2-203ENST00000339162 CDH13P55290 713 aa22.24■■□□□ 1.15
PDLIM2-203ENST00000339162 KDSRQ06136 332 aa22.24■■□□□ 1.15
PDLIM2-203ENST00000339162 ZNF678Q5SXM1 525 aa22.24■■□□□ 1.15
PDLIM2-203ENST00000339162 PTRHD1Q6GMV3 140 aaKnown RBP22.24■■□□□ 1.15
PDLIM2-203ENST00000339162 TANGO2Q6ICL3 276 aa22.24■■□□□ 1.15
PDLIM2-203ENST00000339162 KIAA1191Q96A73 305 aa22.24■■□□□ 1.15
PDLIM2-203ENST00000339162 TBC1D10AQ9BXI6 508 aa22.24■■□□□ 1.15
PDLIM2-203ENST00000339162 GSTO2Q9H4Y5 243 aa22.24■■□□□ 1.15
PDLIM2-203ENST00000339162 SCN8AQ9UQD0 1980 aa22.24■■□□□ 1.15
PDLIM2-203ENST00000339162 A8MUI8 341 aa22.23■■□□□ 1.15
PDLIM2-203ENST00000339162 ATP5BP06576 529 aaKnown RBP22.23■■□□□ 1.15
PDLIM2-203ENST00000339162 C1SP09871 688 aa22.23■■□□□ 1.15
PDLIM2-203ENST00000339162 TPBGLP0DKB5 382 aa22.23■■□□□ 1.15
PDLIM2-203ENST00000339162 ACRV1P26436 265 aa22.23■■□□□ 1.15
PDLIM2-203ENST00000339162 CLCN7P51798 805 aa22.23■■□□□ 1.15
PDLIM2-203ENST00000339162 RINLQ6ZS11 566 aa22.23■■□□□ 1.15
PDLIM2-203ENST00000339162 ETFBKMTQ8IXQ9 262 aa22.23■■□□□ 1.15
PDLIM2-203ENST00000339162 RHEBL1Q8TAI7 183 aa22.23■■□□□ 1.15
PDLIM2-203ENST00000339162 LKAAEAR1Q8TD35 194 aa22.23■■□□□ 1.15
PDLIM2-203ENST00000339162 SUPT3HB4E1H0 165 aa22.23■■□□□ 1.15
PDLIM2-203ENST00000339162 UBFD1O14562 309 aaKnown RBP22.23■■□□□ 1.15
PDLIM2-203ENST00000339162 SUPT3HO75486 399 aa22.23■■□□□ 1.15
PDLIM2-203ENST00000339162 GFAPP14136 432 aa22.23■■□□□ 1.15
PDLIM2-203ENST00000339162 ZNF7P17097 686 aaPredicted RBP22.23■■□□□ 1.15
PDLIM2-203ENST00000339162 CALB2P22676 271 aa22.23■■□□□ 1.15
PDLIM2-203ENST00000339162 PTPN4P29074 926 aa22.23■■□□□ 1.15
PDLIM2-203ENST00000339162 RASSF2P50749 326 aa22.23■■□□□ 1.15
PDLIM2-203ENST00000339162 IL2P60568 153 aa22.23■■□□□ 1.15
PDLIM2-203ENST00000339162 GAB4Q2WGN9 574 aa22.23■■□□□ 1.15
PDLIM2-203ENST00000339162 UNC50Q53HI1 259 aa22.23■■□□□ 1.15
PDLIM2-203ENST00000339162 FRMD7Q6ZUT3 714 aa22.23■■□□□ 1.15
PDLIM2-203ENST00000339162 GPR149Q86SP6 731 aa22.23■■□□□ 1.15
PDLIM2-203ENST00000339162 NKAPQ8N5F7 415 aaKnown RBP22.23■■□□□ 1.15
PDLIM2-203ENST00000339162 STAG3L4Q8TBR4 150 aa22.23■■□□□ 1.15
PDLIM2-203ENST00000339162 INPP5DQ92835 1189 aa22.23■■□□□ 1.15
PDLIM2-203ENST00000339162 ERLEC1Q96DZ1 483 aa22.23■■□□□ 1.15
PDLIM2-203ENST00000339162 MIPEPQ99797 713 aa22.23■■□□□ 1.15
PDLIM2-203ENST00000339162 LMAN2LQ9H0V9 348 aa22.23■■□□□ 1.15
PDLIM2-203ENST00000339162 ELOVL2Q9NXB9 296 aa22.23■■□□□ 1.15
PDLIM2-203ENST00000339162 LNPEPQ9UIQ6 1025 aa22.23■■□□□ 1.15
PDLIM2-203ENST00000339162 G3BP2Q9UN86 482 aaKnown RBP22.23■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms