RNA–Protein interactions for RNA: ENST00000338427.10

NUDCD3-201, Transcript of NudC domain containing 3, humanhuman

TSL 3

Gene NUDCD3, Length 779 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-201ENST00000338427 LINC00303Q3SY05 128 aa13.23□□□□□ -0.29
NUDCD3-201ENST00000338427 KHDC1Q4VXA5 237 aaKnown RBP13.23□□□□□ -0.29
NUDCD3-201ENST00000338427 TEX44Q53QW1 395 aa13.23□□□□□ -0.29
NUDCD3-201ENST00000338427 IYDQ6PHW0 289 aa13.23□□□□□ -0.29
NUDCD3-201ENST00000338427 ADGRG6Q86SQ4 1221 aa13.23□□□□□ -0.29
NUDCD3-201ENST00000338427 RHOT2Q8IXI1 618 aa13.23□□□□□ -0.29
NUDCD3-201ENST00000338427 RHOT1Q8IXI2 618 aa13.23□□□□□ -0.29
NUDCD3-201ENST00000338427 SFRP1Q8N474 314 aa13.23□□□□□ -0.29
NUDCD3-201ENST00000338427 TC2NQ8N9U0 490 aa13.23□□□□□ -0.29
NUDCD3-201ENST00000338427 SNRNP27Q8WVK2 155 aaKnown RBP13.23□□□□□ -0.29
NUDCD3-201ENST00000338427 SLC38A3Q99624 504 aa13.23□□□□□ -0.29
NUDCD3-201ENST00000338427 TBC1D10AQ9BXI6 508 aa13.23□□□□□ -0.29
NUDCD3-201ENST00000338427 GPR63Q9BZJ6 419 aa13.23□□□□□ -0.29
NUDCD3-201ENST00000338427 CDH19Q9H159 772 aa13.23□□□□□ -0.29
NUDCD3-201ENST00000338427 PKD2L2Q9NZM6 624 aa13.23□□□□□ -0.29
NUDCD3-201ENST00000338427 ZFC3H1O60293 1989 aaKnown RBP13.22□□□□□ -0.29
NUDCD3-201ENST00000338427 BUD23O43709 281 aaKnown RBP13.22□□□□□ -0.29
NUDCD3-201ENST00000338427 SPOPO43791 374 aa13.22□□□□□ -0.29
NUDCD3-201ENST00000338427 NUAK1O60285 661 aa13.22□□□□□ -0.29
NUDCD3-201ENST00000338427 SLC25A14O95258 325 aaPredicted RBP13.22□□□□□ -0.29
NUDCD3-201ENST00000338427 TPM1P09493 284 aa13.22□□□□□ -0.29
NUDCD3-201ENST00000338427 PTMSP20962 102 aa13.22□□□□□ -0.29
NUDCD3-201ENST00000338427 CA4P22748 312 aa13.22□□□□□ -0.29
NUDCD3-201ENST00000338427 CHRNA4P43681 627 aa13.22□□□□□ -0.29
NUDCD3-201ENST00000338427 MAPK9P45984 424 aa13.22□□□□□ -0.29
NUDCD3-201ENST00000338427 TAZQ16635 292 aa13.22□□□□□ -0.29
NUDCD3-201ENST00000338427 PLA2G4EQ3MJ16 856 aa13.22□□□□□ -0.29
NUDCD3-201ENST00000338427 CHCHD2P9Q5T1J5 151 aaPredicted RBP13.22□□□□□ -0.29
NUDCD3-201ENST00000338427 LRRC38Q5VT99 294 aa13.22□□□□□ -0.29
NUDCD3-201ENST00000338427 TMEM71Q6P5X7 295 aa13.22□□□□□ -0.29
NUDCD3-201ENST00000338427 CRTC3Q6UUV7 619 aa13.22□□□□□ -0.29
NUDCD3-201ENST00000338427 SPOCD1Q6ZMY3 1216 aa13.22□□□□□ -0.29
NUDCD3-201ENST00000338427 ZC3H18Q86VM9 953 aaKnown RBP13.22□□□□□ -0.29
NUDCD3-201ENST00000338427 SLC25A41Q8N5S1 370 aa13.22□□□□□ -0.29
NUDCD3-201ENST00000338427 LSM14AQ8ND56 463 aaKnown RBP13.22□□□□□ -0.29
NUDCD3-201ENST00000338427 NCSTNQ92542 709 aa13.22□□□□□ -0.29
NUDCD3-201ENST00000338427 KRT35Q92764 455 aa13.22□□□□□ -0.29
NUDCD3-201ENST00000338427 ART4Q93070 314 aa13.22□□□□□ -0.29
NUDCD3-201ENST00000338427 TEKT5Q96M29 485 aa13.22□□□□□ -0.29
NUDCD3-201ENST00000338427 CTRCQ99895 268 aa13.22□□□□□ -0.29
NUDCD3-201ENST00000338427 HERPUD2Q9BSE4 406 aa13.22□□□□□ -0.29
NUDCD3-201ENST00000338427 HEMGNQ9BXL5 484 aa13.22□□□□□ -0.29
NUDCD3-201ENST00000338427 ADGRE3Q9BY15 652 aa13.22□□□□□ -0.29
NUDCD3-201ENST00000338427 KLC4Q9NSK0 619 aa13.22□□□□□ -0.29
NUDCD3-201ENST00000338427 DDX56Q9NY93 547 aaKnown RBP13.22□□□□□ -0.29
NUDCD3-201ENST00000338427 TRIM10Q9UDY6 481 aa13.22□□□□□ -0.29
NUDCD3-201ENST00000338427 KLHL3Q9UH77 587 aa13.22□□□□□ -0.29
NUDCD3-201ENST00000338427 ZNF711Q9Y462 761 aa13.22□□□□□ -0.29
NUDCD3-201ENST00000338427 B3GALT1Q9Y5Z6 326 aa13.22□□□□□ -0.29
NUDCD3-201ENST00000338427 GCN1Q92616 2671 aaKnown RBP13.21□□□□□ -0.29
NUDCD3-201ENST00000338427 A6NCN8 305 aa13.21□□□□□ -0.29
NUDCD3-201ENST00000338427 RCCD1A6NED2 376 aa13.21□□□□□ -0.29
NUDCD3-201ENST00000338427 EFCAB7A8K855 629 aa13.21□□□□□ -0.29
NUDCD3-201ENST00000338427 ZNF487B1APH4 448 aa13.21□□□□□ -0.29
NUDCD3-201ENST00000338427 UGT1A9O60656 530 aa13.21□□□□□ -0.29
NUDCD3-201ENST00000338427 PYGLP06737 847 aa13.21□□□□□ -0.29
NUDCD3-201ENST00000338427 LIPCP11150 499 aa13.21□□□□□ -0.29
NUDCD3-201ENST00000338427 ZFXP17010 805 aaPredicted RBP13.21□□□□□ -0.29
NUDCD3-201ENST00000338427 UGT1A6P19224 532 aa13.21□□□□□ -0.29
NUDCD3-201ENST00000338427 NFKB1P19838 968 aa13.21□□□□□ -0.29
NUDCD3-201ENST00000338427 UGT1A1P22309 533 aa13.21□□□□□ -0.29
NUDCD3-201ENST00000338427 UGT1A4P22310 534 aa13.21□□□□□ -0.29
NUDCD3-201ENST00000338427 UGT1A3P35503 534 aa13.21□□□□□ -0.29
NUDCD3-201ENST00000338427 SLC1A1P43005 524 aa13.21□□□□□ -0.29
NUDCD3-201ENST00000338427 SQSTM1Q13501 440 aa13.21□□□□□ -0.29
NUDCD3-201ENST00000338427 PTPRCAPQ14761 206 aa13.21□□□□□ -0.29
NUDCD3-201ENST00000338427 PRKD1Q15139 912 aaPredicted RBP13.21□□□□□ -0.29
NUDCD3-201ENST00000338427 TCEAL1Q15170 157 aa13.21□□□□□ -0.29
NUDCD3-201ENST00000338427 ODF2Q5BJF6 829 aa13.21□□□□□ -0.29
NUDCD3-201ENST00000338427 MANEAQ5SRI9 462 aa13.21□□□□□ -0.29
NUDCD3-201ENST00000338427 KDELC1Q6UW63 502 aa13.21□□□□□ -0.29
NUDCD3-201ENST00000338427 ZNF605Q86T29 641 aa13.21□□□□□ -0.29
NUDCD3-201ENST00000338427 DTX1Q86Y01 620 aa13.21□□□□□ -0.29
NUDCD3-201ENST00000338427 OR4D9Q8NGE8 314 aa13.21□□□□□ -0.29
NUDCD3-201ENST00000338427 EXTL1Q92935 676 aa13.21□□□□□ -0.29
NUDCD3-201ENST00000338427 AHCYL2Q96HN2 611 aaKnown RBP13.21□□□□□ -0.29
NUDCD3-201ENST00000338427 PLEKHG4BQ96PX9 1271 aa13.21□□□□□ -0.29
NUDCD3-201ENST00000338427 TRIM5Q9C035 493 aa13.21□□□□□ -0.29
NUDCD3-201ENST00000338427 UGT1A7Q9HAW7 530 aa13.21□□□□□ -0.29
NUDCD3-201ENST00000338427 UGT1A10Q9HAW8 530 aa13.21□□□□□ -0.29
NUDCD3-201ENST00000338427 UGT1A8Q9HAW9 530 aa13.21□□□□□ -0.29
NUDCD3-201ENST00000338427 MAGEE1Q9HCI5 957 aa13.21□□□□□ -0.29
NUDCD3-201ENST00000338427 TRIM39Q9HCM9 518 aa13.21□□□□□ -0.29
NUDCD3-201ENST00000338427 SLC39A1Q9NY26 324 aa13.21□□□□□ -0.29
NUDCD3-201ENST00000338427 VPS18Q9P253 973 aa13.21□□□□□ -0.29
NUDCD3-201ENST00000338427 LCMT1Q9UIC8 334 aa13.21□□□□□ -0.29
NUDCD3-201ENST00000338427 ACSL6Q9UKU0 697 aa13.21□□□□□ -0.29
NUDCD3-201ENST00000338427 DNPEPQ9ULA0 475 aa13.21□□□□□ -0.29
NUDCD3-201ENST00000338427 INTUQ9ULD6 942 aa13.21□□□□□ -0.29
NUDCD3-201ENST00000338427 DNAJC16Q9Y2G8 782 aa13.21□□□□□ -0.29
NUDCD3-201ENST00000338427 PCDHA13Q9Y5I0 950 aa13.21□□□□□ -0.29
NUDCD3-201ENST00000338427 ADGRG1Q9Y653 693 aa13.21□□□□□ -0.29
NUDCD3-201ENST00000338427 SDK2Q58EX2 2172 aa13.2□□□□□ -0.3
NUDCD3-201ENST00000338427 PIEZO2Q9H5I5 2752 aa13.2□□□□□ -0.3
NUDCD3-201ENST00000338427 RGSL1A5PLK6 1076 aa13.2□□□□□ -0.3
NUDCD3-201ENST00000338427 PPP1R12AO14974 1030 aaPredicted RBP13.2□□□□□ -0.3
NUDCD3-201ENST00000338427 GPR39O43194 453 aa13.2□□□□□ -0.3
NUDCD3-201ENST00000338427 NDST3O95803 873 aa13.2□□□□□ -0.3
NUDCD3-201ENST00000338427 THRAP10827 490 aa13.2□□□□□ -0.3
NUDCD3-201ENST00000338427 PLA2G2AP14555 144 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 80.4 ms