RNA–Protein interactions for RNA: ENST00000336873.9

HPS4-201, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HPS4, Length 3,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-201ENST00000336873 ZBTB6Q15916 424 aa8.18□□□□□ -1.1
HPS4-201ENST00000336873 OGFOD2Q6N063 350 aa8.18□□□□□ -1.1
HPS4-201ENST00000336873 FAM180BQ6P0A1 224 aa8.18□□□□□ -1.1
HPS4-201ENST00000336873 TMCO5AQ8N6Q1 288 aa8.18□□□□□ -1.1
HPS4-201ENST00000336873 OR52B6Q8NGF0 335 aa8.18□□□□□ -1.1
HPS4-201ENST00000336873 CDKN2AIPNLQ96HQ2 116 aa8.18□□□□□ -1.1
HPS4-201ENST00000336873 MAGED4Q96JG8 741 aa8.18□□□□□ -1.1
HPS4-201ENST00000336873 GTF2IRD1Q9UHL9 959 aa8.18□□□□□ -1.1
HPS4-201ENST00000336873 ANKRD6Q9Y2G4 727 aa8.18□□□□□ -1.1
HPS4-201ENST00000336873 RAI2Q9Y5P3 530 aa8.18□□□□□ -1.1
HPS4-201ENST00000336873 NINQ8N4C6 2090 aa8.18□□□□□ -1.1
HPS4-201ENST00000336873 MGAMO43451 1857 aa8.18□□□□□ -1.1
HPS4-201ENST00000336873 ARID2Q68CP9 1835 aa8.18□□□□□ -1.1
HPS4-201ENST00000336873 OR2AG2A6NM03 316 aa8.18□□□□□ -1.1
HPS4-201ENST00000336873 FGF10O15520 208 aaPredicted RBP8.18□□□□□ -1.1
HPS4-201ENST00000336873 ZSCAN9O15535 394 aaPredicted RBP8.18□□□□□ -1.1
HPS4-201ENST00000336873 LDLRP01130 860 aa8.18□□□□□ -1.1
HPS4-201ENST00000336873 PFKPQ01813 784 aa8.18□□□□□ -1.1
HPS4-201ENST00000336873 LIPEQ05469 1076 aa8.18□□□□□ -1.1
HPS4-201ENST00000336873 ADGRE1Q14246 886 aa8.18□□□□□ -1.1
HPS4-201ENST00000336873 STARD3Q14849 445 aa8.18□□□□□ -1.1
HPS4-201ENST00000336873 AAGABQ6PD74 315 aa8.18□□□□□ -1.1
HPS4-201ENST00000336873 XKR5Q6UX68 686 aa8.18□□□□□ -1.1
HPS4-201ENST00000336873 SH2D5Q6ZV89 423 aa8.18□□□□□ -1.1
HPS4-201ENST00000336873 ARL14EPQ8N8R7 260 aaPredicted RBP8.18□□□□□ -1.1
HPS4-201ENST00000336873 STYXQ8WUJ0 223 aa8.18□□□□□ -1.1
HPS4-201ENST00000336873 C17orf50Q8WW18 174 aa8.18□□□□□ -1.1
HPS4-201ENST00000336873 CENPIQ92674 756 aaPredicted RBP8.18□□□□□ -1.1
HPS4-201ENST00000336873 DTNBP1Q96EV8 351 aa8.18□□□□□ -1.1
HPS4-201ENST00000336873 ITCHQ96J02 903 aa8.18□□□□□ -1.1
HPS4-201ENST00000336873 TRIM62Q9BVG3 475 aa8.18□□□□□ -1.1
HPS4-201ENST00000336873 SLC25A51Q9H1U9 297 aa8.18□□□□□ -1.1
HPS4-201ENST00000336873 LMCD1Q9NZU5 365 aa8.18□□□□□ -1.1
HPS4-201ENST00000336873 SPASTQ9UBP0 616 aa8.18□□□□□ -1.1
HPS4-201ENST00000336873 BRWD3Q6RI45 1802 aa8.18□□□□□ -1.1
HPS4-201ENST00000336873 RGPD3A6NKT7 1758 aaPredicted RBP8.18□□□□□ -1.1
HPS4-201ENST00000336873 RGPD4Q7Z3J3 1758 aa8.18□□□□□ -1.1
HPS4-201ENST00000336873 A0A087X1B8 175 aa8.18□□□□□ -1.1
HPS4-201ENST00000336873 MAGEB3O15480 346 aa8.18□□□□□ -1.1
HPS4-201ENST00000336873 COQ9O75208 318 aa8.18□□□□□ -1.1
HPS4-201ENST00000336873 SLC25A14O95258 325 aaPredicted RBP8.18□□□□□ -1.1
HPS4-201ENST00000336873 KCNE1P15382 129 aa8.18□□□□□ -1.1
HPS4-201ENST00000336873 FAM189BP81408 668 aa8.18□□□□□ -1.1
HPS4-201ENST00000336873 GNA12Q03113 381 aa8.18□□□□□ -1.1
HPS4-201ENST00000336873 ENPEPQ07075 957 aa8.18□□□□□ -1.1
HPS4-201ENST00000336873 HNRNPDQ14103 355 aaKnown RBP8.18□□□□□ -1.1
HPS4-201ENST00000336873 PTGR1Q14914 329 aa8.18□□□□□ -1.1
HPS4-201ENST00000336873 TAZQ16635 292 aa8.18□□□□□ -1.1
HPS4-201ENST00000336873 AAK1Q2M2I8 961 aa8.18□□□□□ -1.1
HPS4-201ENST00000336873 CWF19L1Q69YN2 538 aaKnown RBP8.18□□□□□ -1.1
HPS4-201ENST00000336873 TXNDC8Q6A555 127 aa8.18□□□□□ -1.1
HPS4-201ENST00000336873 PHACTR4Q8IZ21 702 aa8.18□□□□□ -1.1
HPS4-201ENST00000336873 KDM1BQ8NB78 822 aa8.18□□□□□ -1.1
HPS4-201ENST00000336873 SPPL2BQ8TCT7 592 aa8.18□□□□□ -1.1
HPS4-201ENST00000336873 HSPBAP1Q96EW2 488 aa8.18□□□□□ -1.1
HPS4-201ENST00000336873 MS4A4AQ96JQ5 239 aa8.18□□□□□ -1.1
HPS4-201ENST00000336873 FCRL5Q96RD9 977 aa8.18□□□□□ -1.1
HPS4-201ENST00000336873 NR1H4Q96RI1 486 aaPredicted RBP8.18□□□□□ -1.1
HPS4-201ENST00000336873 EBPLQ9BY08 206 aa8.18□□□□□ -1.1
HPS4-201ENST00000336873 RIBC2Q9H4K1 309 aa8.18□□□□□ -1.1
HPS4-201ENST00000336873 ELOVL6Q9H5J4 265 aa8.18□□□□□ -1.1
HPS4-201ENST00000336873 ZDHHC6Q9H6R6 413 aa8.18□□□□□ -1.1
HPS4-201ENST00000336873 GALNT8Q9NY28 637 aa8.18□□□□□ -1.1
HPS4-201ENST00000336873 CACNA2D2Q9NY47 1150 aa8.18□□□□□ -1.1
HPS4-201ENST00000336873 RRN3Q9NYV6 651 aa8.18□□□□□ -1.1
HPS4-201ENST00000336873 SEPT3Q9UH03 358 aa8.18□□□□□ -1.1
HPS4-201ENST00000336873 COL1A2P08123 1366 aa8.17□□□□□ -1.1
HPS4-201ENST00000336873 GNG14A0A1W2PPG7 69 aa8.17□□□□□ -1.1
HPS4-201ENST00000336873 ARVCFO00192 962 aa8.17□□□□□ -1.1
HPS4-201ENST00000336873 LIN7AO14910 233 aaPredicted RBP8.17□□□□□ -1.1
HPS4-201ENST00000336873 H2AFYO75367 372 aaKnown RBP8.17□□□□□ -1.1
HPS4-201ENST00000336873 CHRM5P08912 532 aaPredicted RBP8.17□□□□□ -1.1
HPS4-201ENST00000336873 ZNF37AP17032 561 aaPredicted RBP8.17□□□□□ -1.1
HPS4-201ENST00000336873 TACR2P21452 398 aa8.17□□□□□ -1.1
HPS4-201ENST00000336873 DPP6P42658 865 aa8.17□□□□□ -1.1
HPS4-201ENST00000336873 SQLEQ14534 574 aa8.17□□□□□ -1.1
HPS4-201ENST00000336873 GLYATQ6IB77 296 aa8.17□□□□□ -1.1
HPS4-201ENST00000336873 CCDC80Q76M96 950 aa8.17□□□□□ -1.1
HPS4-201ENST00000336873 CILP2Q8IUL8 1156 aa8.17□□□□□ -1.1
HPS4-201ENST00000336873 MFSD6LQ8IWD5 586 aa8.17□□□□□ -1.1
HPS4-201ENST00000336873 MICU2Q8IYU8 434 aa8.17□□□□□ -1.1
HPS4-201ENST00000336873 LILRA2Q8N149 483 aa8.17□□□□□ -1.1
HPS4-201ENST00000336873 DDX51Q8N8A6 666 aaKnown RBP eCLIP8.17□□□□□ -1.1
HPS4-201ENST00000336873 LMNTD1Q8N9Z9 388 aa8.17□□□□□ -1.1
HPS4-201ENST00000336873 SOCS4Q8WXH5 440 aa8.17□□□□□ -1.1
HPS4-201ENST00000336873 TRIB2Q92519 343 aa8.17□□□□□ -1.1
HPS4-201ENST00000336873 PTERQ96BW5 349 aa8.17□□□□□ -1.1
HPS4-201ENST00000336873 GORASP1Q9BQQ3 440 aa8.17□□□□□ -1.1
HPS4-201ENST00000336873 PCDH12Q9NPG4 1184 aa8.17□□□□□ -1.1
HPS4-201ENST00000336873 INTS7Q9NVH2 962 aaKnown RBP8.17□□□□□ -1.1
HPS4-201ENST00000336873 RIC8BQ9NVN3 520 aa8.17□□□□□ -1.1
HPS4-201ENST00000336873 INVSQ9Y283 1065 aa8.17□□□□□ -1.1
HPS4-201ENST00000336873 FADS3Q9Y5Q0 445 aa8.17□□□□□ -1.1
HPS4-201ENST00000336873 A6NHS1 94 aa8.17□□□□□ -1.1
HPS4-201ENST00000336873 J3QRK9 145 aa8.17□□□□□ -1.1
HPS4-201ENST00000336873 TOMM70O94826 608 aa8.17□□□□□ -1.1
HPS4-201ENST00000336873 GBAP04062 536 aa8.17□□□□□ -1.1
HPS4-201ENST00000336873 HSPA1AP0DMV8 641 aaKnown RBP8.17□□□□□ -1.1
HPS4-201ENST00000336873 HSPA1BP0DMV9 641 aaKnown RBP8.17□□□□□ -1.1
HPS4-201ENST00000336873 PSMB9P28065 219 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms