RNA–Protein interactions for RNA: ENST00000332556.4

LAMP1-201, Transcript of lysosomal associated membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LAMP1, Length 2,699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMP1-201ENST00000332556 CDK15Q96Q40 435 aa18.93■□□□□ 0.62
LAMP1-201ENST00000332556 PDFQ9HBH1 243 aa18.93■□□□□ 0.62
LAMP1-201ENST00000332556 SPAG4Q9NPE6 437 aa18.93■□□□□ 0.62
LAMP1-201ENST00000332556 MRASO14807 208 aa18.93■□□□□ 0.62
LAMP1-201ENST00000332556 SEC24AO95486 1093 aa18.93■□□□□ 0.62
LAMP1-201ENST00000332556 ZNF37AP17032 561 aaPredicted RBP18.93■□□□□ 0.62
LAMP1-201ENST00000332556 ITGB6P18564 788 aa18.93■□□□□ 0.62
LAMP1-201ENST00000332556 IMPDH1P20839 514 aa18.93■□□□□ 0.62
LAMP1-201ENST00000332556 PRKCQQ04759 706 aa18.93■□□□□ 0.62
LAMP1-201ENST00000332556 GPR17Q13304 367 aa18.93■□□□□ 0.62
LAMP1-201ENST00000332556 SETMARQ53H47 684 aaPredicted RBP18.93■□□□□ 0.62
LAMP1-201ENST00000332556 UGT3A1Q6NUS8 523 aa18.93■□□□□ 0.62
LAMP1-201ENST00000332556 RETREG3Q86VR2 466 aa18.93■□□□□ 0.62
LAMP1-201ENST00000332556 FUNDC1Q8IVP5 155 aa18.93■□□□□ 0.62
LAMP1-201ENST00000332556 CCDC117Q8IWD4 279 aaPredicted RBP18.93■□□□□ 0.62
LAMP1-201ENST00000332556 SIDT2Q8NBJ9 832 aaKnown RBP18.93■□□□□ 0.62
LAMP1-201ENST00000332556 TSPAN17Q96FV3 270 aa18.93■□□□□ 0.62
LAMP1-201ENST00000332556 RANBP9Q96S59 729 aa18.93■□□□□ 0.62
LAMP1-201ENST00000332556 GPR21Q99679 349 aa18.93■□□□□ 0.62
LAMP1-201ENST00000332556 CINPQ9BW66 212 aaPredicted RBP18.93■□□□□ 0.62
LAMP1-201ENST00000332556 TUBB1Q9H4B7 451 aa18.93■□□□□ 0.62
LAMP1-201ENST00000332556 MEAF6Q9HAF1 191 aa18.93■□□□□ 0.62
LAMP1-201ENST00000332556 TMEM161AQ9NX61 479 aa18.93■□□□□ 0.62
LAMP1-201ENST00000332556 FKBPLQ9UIM3 349 aa18.93■□□□□ 0.62
LAMP1-201ENST00000332556 MED16Q9Y2X0 877 aa18.93■□□□□ 0.62
LAMP1-201ENST00000332556 ZNF711Q9Y462 761 aa18.93■□□□□ 0.62
LAMP1-201ENST00000332556 COCHO43405 550 aa18.92■□□□□ 0.62
LAMP1-201ENST00000332556 ATP6V1G1O75348 118 aa18.92■□□□□ 0.62
LAMP1-201ENST00000332556 RPP40O75818 363 aaKnown RBP18.92■□□□□ 0.62
LAMP1-201ENST00000332556 GALTP07902 379 aa18.92■□□□□ 0.62
LAMP1-201ENST00000332556 HSPA1AP0DMV8 641 aaKnown RBP18.92■□□□□ 0.62
LAMP1-201ENST00000332556 HSPA1BP0DMV9 641 aaKnown RBP18.92■□□□□ 0.62
LAMP1-201ENST00000332556 FDXRP22570 491 aa18.92■□□□□ 0.62
LAMP1-201ENST00000332556 EEF1DP29692 281 aaKnown RBP18.92■□□□□ 0.62
LAMP1-201ENST00000332556 GKP32189 559 aa18.92■□□□□ 0.62
LAMP1-201ENST00000332556 FBXO22Q8NEZ5 403 aa18.92■□□□□ 0.62
LAMP1-201ENST00000332556 FNDC8Q8TC99 324 aa18.92■□□□□ 0.62
LAMP1-201ENST00000332556 C19orf60Q96EN9 201 aa18.92■□□□□ 0.62
LAMP1-201ENST00000332556 ACOX2Q99424 681 aa18.92■□□□□ 0.62
LAMP1-201ENST00000332556 PIF1Q9H611 641 aa18.92■□□□□ 0.62
LAMP1-201ENST00000332556 THSD7BQ9C0I4 1608 aa18.92■□□□□ 0.62
LAMP1-201ENST00000332556 SYN3O14994 580 aa18.92■□□□□ 0.62
LAMP1-201ENST00000332556 ACSL4O60488 711 aa18.92■□□□□ 0.62
LAMP1-201ENST00000332556 PQBP1O60828 265 aaKnown RBP18.92■□□□□ 0.62
LAMP1-201ENST00000332556 SRP72O76094 671 aaKnown RBP18.92■□□□□ 0.62
LAMP1-201ENST00000332556 IGLV3-27P01718 113 aa18.92■□□□□ 0.62
LAMP1-201ENST00000332556 IMPDH2P12268 514 aa18.92■□□□□ 0.62
LAMP1-201ENST00000332556 CTPS1P17812 591 aa18.92■□□□□ 0.62
LAMP1-201ENST00000332556 ATP6V1B2P21281 511 aa18.92■□□□□ 0.62
LAMP1-201ENST00000332556 CST5P28325 142 aaPredicted RBP18.92■□□□□ 0.62
LAMP1-201ENST00000332556 SLC7A1P30825 629 aa18.92■□□□□ 0.62
LAMP1-201ENST00000332556 KPNA2P52292 529 aaKnown RBP18.92■□□□□ 0.62
LAMP1-201ENST00000332556 HK2P52789 917 aa18.92■□□□□ 0.62
LAMP1-201ENST00000332556 STX5Q13190 355 aa18.92■□□□□ 0.62
LAMP1-201ENST00000332556 PARP15Q460N3 678 aa18.92■□□□□ 0.62
LAMP1-201ENST00000332556 NHSL2Q5HYW2 709 aa18.92■□□□□ 0.62
LAMP1-201ENST00000332556 LRRC49Q8IUZ0 686 aa18.92■□□□□ 0.62
LAMP1-201ENST00000332556 CBR4Q8N4T8 237 aa18.92■□□□□ 0.62
LAMP1-201ENST00000332556 CLK4Q9HAZ1 481 aaKnown RBP18.92■□□□□ 0.62
LAMP1-201ENST00000332556 EGFL7Q9UHF1 273 aa18.92■□□□□ 0.62
LAMP1-201ENST00000332556 BOLA2-SMG1P6H3BVE0 249 aa18.91■□□□□ 0.62
LAMP1-201ENST00000332556 CORO1AP31146 461 aaKnown RBP18.91■□□□□ 0.62
LAMP1-201ENST00000332556 ARL1P40616 181 aaPredicted RBP18.91■□□□□ 0.62
LAMP1-201ENST00000332556 PLD1Q13393 1074 aa18.91■□□□□ 0.62
LAMP1-201ENST00000332556 ATXN7L2Q5T6C5 722 aaPredicted RBP18.91■□□□□ 0.62
LAMP1-201ENST00000332556 FAM45BPQ6NSW5 357 aa18.91■□□□□ 0.62
LAMP1-201ENST00000332556 FAM45AQ8TCE6 357 aa18.91■□□□□ 0.62
LAMP1-201ENST00000332556 EML4Q9HC35 981 aaKnown RBP18.91■□□□□ 0.62
LAMP1-201ENST00000332556 TLR9Q9NR96 1032 aa18.91■□□□□ 0.62
LAMP1-201ENST00000332556 IL37Q9NZH6 218 aa18.91■□□□□ 0.62
LAMP1-201ENST00000332556 SQORQ9Y6N5 450 aa18.91■□□□□ 0.62
LAMP1-201ENST00000332556 TCRBV3S1A0A5B6 114 aa18.91■□□□□ 0.62
LAMP1-201ENST00000332556 FAM92AA1XBS5 289 aa18.91■□□□□ 0.62
LAMP1-201ENST00000332556 WISP3O95389 354 aaPredicted RBP18.91■□□□□ 0.62
LAMP1-201ENST00000332556 PRLP01236 227 aa18.91■□□□□ 0.62
LAMP1-201ENST00000332556 TPP2P29144 1249 aaPredicted RBP18.91■□□□□ 0.62
LAMP1-201ENST00000332556 ATP5C1P36542 298 aaKnown RBP18.91■□□□□ 0.62
LAMP1-201ENST00000332556 DIO3P55073 304 aa18.91■□□□□ 0.62
LAMP1-201ENST00000332556 PTPRNQ16849 979 aa18.91■□□□□ 0.62
LAMP1-201ENST00000332556 RNF219Q5W0B1 726 aaPredicted RBP18.91■□□□□ 0.62
LAMP1-201ENST00000332556 BRSK1Q8TDC3 778 aa18.91■□□□□ 0.62
LAMP1-201ENST00000332556 TADA1Q96BN2 335 aa18.91■□□□□ 0.62
LAMP1-201ENST00000332556 ISOC1Q96CN7 298 aa18.91■□□□□ 0.62
LAMP1-201ENST00000332556 PLEKHG4BQ96PX9 1271 aa18.91■□□□□ 0.62
LAMP1-201ENST00000332556 SLC22A12Q96S37 553 aa18.91■□□□□ 0.62
LAMP1-201ENST00000332556 MUC3BQ9H195 1237 aa18.91■□□□□ 0.62
LAMP1-201ENST00000332556 SMOXQ9NWM0 555 aa18.91■□□□□ 0.62
LAMP1-201ENST00000332556 UBA2Q9UBT2 640 aaPredicted RBP18.91■□□□□ 0.62
LAMP1-201ENST00000332556 SCN5AQ14524 2016 aa18.91■□□□□ 0.62
LAMP1-201ENST00000332556 TMEM189-UBE2V1I3L0A0 370 aa18.9■□□□□ 0.62
LAMP1-201ENST00000332556 K7ERQ8 282 aa18.9■□□□□ 0.62
LAMP1-201ENST00000332556 INPPL1O15357 1258 aa18.9■□□□□ 0.62
LAMP1-201ENST00000332556 CLASP2O75122 1294 aaKnown RBP18.9■□□□□ 0.62
LAMP1-201ENST00000332556 INHAP05111 366 aa18.9■□□□□ 0.62
LAMP1-201ENST00000332556 CASP2P42575 452 aa18.9■□□□□ 0.62
LAMP1-201ENST00000332556 MAGEA11P43364 429 aa18.9■□□□□ 0.62
LAMP1-201ENST00000332556 STC1P52823 247 aa18.9■□□□□ 0.62
LAMP1-201ENST00000332556 OXCT1P55809 520 aa18.9■□□□□ 0.62
LAMP1-201ENST00000332556 HERVK_113P63132 956 aa18.9■□□□□ 0.62
LAMP1-201ENST00000332556 PLIN5Q00G26 463 aa18.9■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms