RNA–Protein interactions for RNA: ENST00000327304.9

EXOSC3-201, Transcript of exosome component 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXOSC3, Length 1,806 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-201ENST00000327304 GPR150Q8NGU9 434 aa18.65■□□□□ 0.58
EXOSC3-201ENST00000327304 CCT6BQ92526 530 aa18.65■□□□□ 0.58
EXOSC3-201ENST00000327304 FAM131CQ96AQ9 280 aa18.65■□□□□ 0.58
EXOSC3-201ENST00000327304 TTC28Q96AY4 2481 aa18.65■□□□□ 0.58
EXOSC3-201ENST00000327304 CDKN2AIPNLQ96HQ2 116 aa18.65■□□□□ 0.58
EXOSC3-201ENST00000327304 TMEM216Q9P0N5 145 aa18.65■□□□□ 0.58
EXOSC3-201ENST00000327304 CAMSAP3Q9P1Y5 1249 aaPredicted RBP18.65■□□□□ 0.58
EXOSC3-201ENST00000327304 TLK1Q9UKI8 766 aa18.65■□□□□ 0.58
EXOSC3-201ENST00000327304 SCML1Q9UN30 329 aa18.65■□□□□ 0.58
EXOSC3-201ENST00000327304 RRP15Q9Y3B9 282 aaKnown RBP18.65■□□□□ 0.58
EXOSC3-201ENST00000327304 FAM95CA0A1B0GW59 222 aa18.64■□□□□ 0.57
EXOSC3-201ENST00000327304 CCDC162PA2VCL2 907 aa18.64■□□□□ 0.57
EXOSC3-201ENST00000327304 NEMP1O14524 444 aa18.64■□□□□ 0.57
EXOSC3-201ENST00000327304 ELFN1P0C7U0 828 aa18.64■□□□□ 0.57
EXOSC3-201ENST00000327304 TROVE2P10155 538 aaKnown RBP eCLIP18.64■□□□□ 0.57
EXOSC3-201ENST00000327304 BPIP17213 487 aa18.64■□□□□ 0.57
EXOSC3-201ENST00000327304 CRABP2P29373 138 aa18.64■□□□□ 0.57
EXOSC3-201ENST00000327304 LIG3P49916 1009 aa18.64■□□□□ 0.57
EXOSC3-201ENST00000327304 CLCN5P51795 746 aa18.64■□□□□ 0.57
EXOSC3-201ENST00000327304 POU4F1Q01851 419 aa18.64■□□□□ 0.57
EXOSC3-201ENST00000327304 MTAPQ13126 283 aa18.64■□□□□ 0.57
EXOSC3-201ENST00000327304 TMEM52BQ4KMG9 183 aa18.64■□□□□ 0.57
EXOSC3-201ENST00000327304 ANO7Q6IWH7 933 aa18.64■□□□□ 0.57
EXOSC3-201ENST00000327304 SPEM1Q8N4L4 309 aa18.64■□□□□ 0.57
EXOSC3-201ENST00000327304 ACVR1CQ8NER5 493 aa18.64■□□□□ 0.57
EXOSC3-201ENST00000327304 TSTD1Q8NFU3 115 aa18.64■□□□□ 0.57
EXOSC3-201ENST00000327304 OR6P1Q8NGX9 317 aa18.64■□□□□ 0.57
EXOSC3-201ENST00000327304 SCG3Q8WXD2 468 aaKnown RBP18.64■□□□□ 0.57
EXOSC3-201ENST00000327304 C7orf26Q96N11 449 aa18.64■□□□□ 0.57
EXOSC3-201ENST00000327304 MECRQ9BV79 373 aa18.64■□□□□ 0.57
EXOSC3-201ENST00000327304 HAUS5O94927 633 aa18.63■□□□□ 0.57
EXOSC3-201ENST00000327304 APOA4P06727 396 aa18.63■□□□□ 0.57
EXOSC3-201ENST00000327304 F7P08709 466 aaPredicted RBP18.63■□□□□ 0.57
EXOSC3-201ENST00000327304 ACADMP11310 421 aa18.63■□□□□ 0.57
EXOSC3-201ENST00000327304 STMN1P16949 149 aa18.63■□□□□ 0.57
EXOSC3-201ENST00000327304 RAB10P61026 200 aa18.63■□□□□ 0.57
EXOSC3-201ENST00000327304 FASTKD1Q53R41 847 aaKnown RBP18.63■□□□□ 0.57
EXOSC3-201ENST00000327304 RAPH1Q70E73 1250 aa18.63■□□□□ 0.57
EXOSC3-201ENST00000327304 TRPM8Q7Z2W7 1104 aa18.63■□□□□ 0.57
EXOSC3-201ENST00000327304 FAM124AQ86V42 546 aa18.63■□□□□ 0.57
EXOSC3-201ENST00000327304 CBARPQ8N350 705 aaPredicted RBP18.63■□□□□ 0.57
EXOSC3-201ENST00000327304 MID2Q9UJV3 735 aa18.63■□□□□ 0.57
EXOSC3-201ENST00000327304 PI15O43692 258 aa18.63■□□□□ 0.57
EXOSC3-201ENST00000327304 AP1G1O43747 822 aa18.63■□□□□ 0.57
EXOSC3-201ENST00000327304 MMP20O60882 483 aa18.63■□□□□ 0.57
EXOSC3-201ENST00000327304 GOT2P00505 430 aaKnown RBP18.63■□□□□ 0.57
EXOSC3-201ENST00000327304 GM2AP17900 193 aa18.63■□□□□ 0.57
EXOSC3-201ENST00000327304 SPINT3P49223 89 aa18.63■□□□□ 0.57
EXOSC3-201ENST00000327304 SF3A3Q12874 501 aaKnown RBP eCLIP18.63■□□□□ 0.57
EXOSC3-201ENST00000327304 CHI3L2Q15782 390 aa18.63■□□□□ 0.57
EXOSC3-201ENST00000327304 TMEM31Q5JXX7 168 aa18.63■□□□□ 0.57
EXOSC3-201ENST00000327304 RNF187Q5TA31 235 aaPredicted RBP18.63■□□□□ 0.57
EXOSC3-201ENST00000327304 MRNIPQ6NTE8 343 aa18.63■□□□□ 0.57
EXOSC3-201ENST00000327304 USP30Q70CQ3 517 aa18.63■□□□□ 0.57
EXOSC3-201ENST00000327304 PTAR1Q7Z6K3 402 aaPredicted RBP18.63■□□□□ 0.57
EXOSC3-201ENST00000327304 SLC41A1Q8IVJ1 513 aa18.63■□□□□ 0.57
EXOSC3-201ENST00000327304 PLD6Q8N2A8 252 aaKnown RBP18.63■□□□□ 0.57
EXOSC3-201ENST00000327304 PGBD3Q8N328 593 aa18.63■□□□□ 0.57
EXOSC3-201ENST00000327304 GPR26Q8NDV2 337 aa18.63■□□□□ 0.57
EXOSC3-201ENST00000327304 TSNARE1Q96NA8 513 aa18.63■□□□□ 0.57
EXOSC3-201ENST00000327304 COPG2Q9UBF2 871 aa18.63■□□□□ 0.57
EXOSC3-201ENST00000327304 EBF1Q9UH73 591 aa18.63■□□□□ 0.57
EXOSC3-201ENST00000327304 COQ6Q9Y2Z9 468 aa18.63■□□□□ 0.57
EXOSC3-201ENST00000327304 USH1CQ9Y6N9 552 aa18.63■□□□□ 0.57
EXOSC3-201ENST00000327304 NUMA1Q14980 2115 aa18.62■□□□□ 0.57
EXOSC3-201ENST00000327304 A0A0C4DFX4 3053 aa18.62■□□□□ 0.57
EXOSC3-201ENST00000327304 LRRK1Q38SD2 2015 aa18.62■□□□□ 0.57
EXOSC3-201ENST00000327304 H0Y858 1186 aa18.62■□□□□ 0.57
EXOSC3-201ENST00000327304 GAPDHSO14556 408 aaPredicted RBP18.62■□□□□ 0.57
EXOSC3-201ENST00000327304 SLC35E2BP0CK96 405 aa18.62■□□□□ 0.57
EXOSC3-201ENST00000327304 PRSS56P0CW18 603 aa18.62■□□□□ 0.57
EXOSC3-201ENST00000327304 OGNP20774 298 aaKnown RBP18.62■□□□□ 0.57
EXOSC3-201ENST00000327304 ETV3P41162 512 aa18.62■□□□□ 0.57
EXOSC3-201ENST00000327304 TPMTP51580 245 aa18.62■□□□□ 0.57
EXOSC3-201ENST00000327304 XIAPP98170 497 aa18.62■□□□□ 0.57
EXOSC3-201ENST00000327304 CCDC15Q0P6D6 951 aa18.62■□□□□ 0.57
EXOSC3-201ENST00000327304 BST1Q10588 318 aa18.62■□□□□ 0.57
EXOSC3-201ENST00000327304 PEX6Q13608 980 aa18.62■□□□□ 0.57
EXOSC3-201ENST00000327304 PCLAFQ15004 111 aa18.62■□□□□ 0.57
EXOSC3-201ENST00000327304 LACTB2Q53H82 288 aaPredicted RBP18.62■□□□□ 0.57
EXOSC3-201ENST00000327304 FAM151BQ6UXP7 276 aa18.62■□□□□ 0.57
EXOSC3-201ENST00000327304 Q6ZVL8 140 aa18.62■□□□□ 0.57
EXOSC3-201ENST00000327304 PNPLA1Q8N8W4 532 aa18.62■□□□□ 0.57
EXOSC3-201ENST00000327304 OR14C36Q8NHC7 312 aa18.62■□□□□ 0.57
EXOSC3-201ENST00000327304 ELMO2Q96JJ3 720 aa18.62■□□□□ 0.57
EXOSC3-201ENST00000327304 C1QTNF1Q9BXJ1 281 aa18.62■□□□□ 0.57
EXOSC3-201ENST00000327304 IL26Q9NPH9 171 aa18.62■□□□□ 0.57
EXOSC3-201ENST00000327304 FBXO6Q9NRD1 293 aaPredicted RBP18.62■□□□□ 0.57
EXOSC3-201ENST00000327304 DLGAP2Q9P1A6 1054 aa18.62■□□□□ 0.57
EXOSC3-201ENST00000327304 MARCH4Q9P2E8 410 aaPredicted RBP18.62■□□□□ 0.57
EXOSC3-201ENST00000327304 CD84Q9UIB8 345 aa18.62■□□□□ 0.57
EXOSC3-201ENST00000327304 FZD4Q9ULV1 537 aa18.62■□□□□ 0.57
EXOSC3-201ENST00000327304 CORO1CQ9ULV4 474 aaPredicted RBP18.62■□□□□ 0.57
EXOSC3-201ENST00000327304 ACOT9Q9Y305 439 aa18.62■□□□□ 0.57
EXOSC3-201ENST00000327304 ZNF106Q9H2Y7 1883 aaKnown RBP18.61■□□□□ 0.57
EXOSC3-201ENST00000327304 A0A087X1B8 175 aa18.61■□□□□ 0.57
EXOSC3-201ENST00000327304 PLRG1O43660 514 aaKnown RBP18.61■□□□□ 0.57
EXOSC3-201ENST00000327304 SNNO75324 88 aaPredicted RBP18.61■□□□□ 0.57
EXOSC3-201ENST00000327304 S1PR4O95977 384 aa18.61■□□□□ 0.57
EXOSC3-201ENST00000327304 C6P13671 934 aa18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms