RNA–Protein interactions for RNA: ENST00000317868.8

ATG4C-201, Transcript of autophagy related 4C cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4C, Length 2,938 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4C-201ENST00000317868 TFAP2AP05549 437 aa13.69□□□□□ -0.22
ATG4C-201ENST00000317868 RHOCP08134 193 aa13.69□□□□□ -0.22
ATG4C-201ENST00000317868 GFAPP14136 432 aa13.69□□□□□ -0.22
ATG4C-201ENST00000317868 TRAF2Q12933 501 aa13.69□□□□□ -0.22
ATG4C-201ENST00000317868 GK3PQ14409 553 aa13.69□□□□□ -0.22
ATG4C-201ENST00000317868 HECTD3Q5T447 861 aa13.69□□□□□ -0.22
ATG4C-201ENST00000317868 ANKS6Q68DC2 871 aa13.69□□□□□ -0.22
ATG4C-201ENST00000317868 ANKFN1Q8N957 763 aa13.69□□□□□ -0.22
ATG4C-201ENST00000317868 LRTOMTQ8WZ04 291 aa13.69□□□□□ -0.22
ATG4C-201ENST00000317868 EXOC2Q96KP1 924 aa13.69□□□□□ -0.22
ATG4C-201ENST00000317868 KLF16Q9BXK1 252 aaPredicted RBP13.69□□□□□ -0.22
ATG4C-201ENST00000317868 P2RY12Q9H244 342 aa13.69□□□□□ -0.22
ATG4C-201ENST00000317868 LHX3Q9UBR4 397 aa13.69□□□□□ -0.22
ATG4C-201ENST00000317868 FAM50BQ9Y247 325 aa13.69□□□□□ -0.22
ATG4C-201ENST00000317868 PCDHA9Q9Y5H5 950 aa13.69□□□□□ -0.22
ATG4C-201ENST00000317868 RAI2Q9Y5P3 530 aa13.69□□□□□ -0.22
ATG4C-201ENST00000317868 COMMD10Q9Y6G5 202 aa13.69□□□□□ -0.22
ATG4C-201ENST00000317868 UBA6A0AVT1 1052 aaPredicted RBP13.69□□□□□ -0.22
ATG4C-201ENST00000317868 EME2A4GXA9 379 aaPredicted RBP13.69□□□□□ -0.22
ATG4C-201ENST00000317868 ASPDHA6ND91 283 aa13.69□□□□□ -0.22
ATG4C-201ENST00000317868 SUPT3HB4E1H0 165 aa13.69□□□□□ -0.22
ATG4C-201ENST00000317868 SUPT3HO75486 399 aa13.69□□□□□ -0.22
ATG4C-201ENST00000317868 ESRRBO95718 433 aa13.69□□□□□ -0.22
ATG4C-201ENST00000317868 PKMP14618 531 aaKnown RBP13.69□□□□□ -0.22
ATG4C-201ENST00000317868 IDO1P14902 403 aa13.69□□□□□ -0.22
ATG4C-201ENST00000317868 CORO1AP31146 461 aaKnown RBP13.69□□□□□ -0.22
ATG4C-201ENST00000317868 TTPAP49638 278 aa13.69□□□□□ -0.22
ATG4C-201ENST00000317868 IKBKEQ14164 716 aa13.69□□□□□ -0.22
ATG4C-201ENST00000317868 RCAN2Q14206 197 aa13.69□□□□□ -0.22
ATG4C-201ENST00000317868 ADGRF1Q5T601 910 aa13.69□□□□□ -0.22
ATG4C-201ENST00000317868 LCN8Q6JVE9 175 aa13.69□□□□□ -0.22
ATG4C-201ENST00000317868 SPATA19Q7Z5L4 167 aa13.69□□□□□ -0.22
ATG4C-201ENST00000317868 SYVN1Q86TM6 617 aa13.69□□□□□ -0.22
ATG4C-201ENST00000317868 SLC15A3Q8IY34 581 aa13.69□□□□□ -0.22
ATG4C-201ENST00000317868 OR2T34Q8NGX1 318 aa13.69□□□□□ -0.22
ATG4C-201ENST00000317868 OR2T3Q8NH03 318 aa13.69□□□□□ -0.22
ATG4C-201ENST00000317868 KCNJ9Q92806 393 aa13.69□□□□□ -0.22
ATG4C-201ENST00000317868 WBP2Q969T9 261 aa13.69□□□□□ -0.22
ATG4C-201ENST00000317868 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.69□□□□□ -0.22
ATG4C-201ENST00000317868 AIG1Q9NVV5 245 aa13.69□□□□□ -0.22
ATG4C-201ENST00000317868 TMEM45AQ9NWC5 275 aa13.69□□□□□ -0.22
ATG4C-201ENST00000317868 GMPR2Q9P2T1 348 aaKnown RBP13.69□□□□□ -0.22
ATG4C-201ENST00000317868 NPEPPSL1A6NEC2 478 aa13.68□□□□□ -0.22
ATG4C-201ENST00000317868 AQP12BA6NM10 295 aa13.68□□□□□ -0.22
ATG4C-201ENST00000317868 E2F3O00716 465 aa13.68□□□□□ -0.22
ATG4C-201ENST00000317868 BMP2P12643 396 aa13.68□□□□□ -0.22
ATG4C-201ENST00000317868 TUFMP49411 452 aaKnown RBP13.68□□□□□ -0.22
ATG4C-201ENST00000317868 YBX1P67809 324 aaKnown RBP13.68□□□□□ -0.22
ATG4C-201ENST00000317868 C6orf52Q5T4I8 152 aa13.68□□□□□ -0.22
ATG4C-201ENST00000317868 CARM1Q86X55 608 aa13.68□□□□□ -0.22
ATG4C-201ENST00000317868 AQP12AQ8IXF9 295 aa13.68□□□□□ -0.22
ATG4C-201ENST00000317868 RMDN1Q96DB5 314 aa13.68□□□□□ -0.22
ATG4C-201ENST00000317868 TRMT2BQ96GJ1 504 aaKnown RBP13.68□□□□□ -0.22
ATG4C-201ENST00000317868 MRPS26Q9BYN8 205 aaKnown RBP13.68□□□□□ -0.22
ATG4C-201ENST00000317868 RBM38Q9H0Z9 239 aaKnown RBP13.68□□□□□ -0.22
ATG4C-201ENST00000317868 NDUFA13Q9P0J0 144 aa13.68□□□□□ -0.22
ATG4C-201ENST00000317868 DNMT3BQ9UBC3 853 aaKnown RBP13.68□□□□□ -0.22
ATG4C-201ENST00000317868 FKBPLQ9UIM3 349 aa13.68□□□□□ -0.22
ATG4C-201ENST00000317868 NR5A2O00482 541 aa13.68□□□□□ -0.22
ATG4C-201ENST00000317868 PITPNM1O00562 1244 aa13.68□□□□□ -0.22
ATG4C-201ENST00000317868 NDUFS3O75489 264 aa13.68□□□□□ -0.22
ATG4C-201ENST00000317868 TNFAIP8O95379 198 aa13.68□□□□□ -0.22
ATG4C-201ENST00000317868 SEC24AO95486 1093 aa13.68□□□□□ -0.22
ATG4C-201ENST00000317868 PYGLP06737 847 aa13.68□□□□□ -0.22
ATG4C-201ENST00000317868 SLC6A2P23975 617 aa13.68□□□□□ -0.22
ATG4C-201ENST00000317868 PRDX3P30048 256 aaKnown RBP13.68□□□□□ -0.22
ATG4C-201ENST00000317868 GSTT1P30711 240 aa13.68□□□□□ -0.22
ATG4C-201ENST00000317868 MC4RP32245 332 aa13.68□□□□□ -0.22
ATG4C-201ENST00000317868 FXNQ16595 210 aa13.68□□□□□ -0.22
ATG4C-201ENST00000317868 PTPRNQ16849 979 aa13.68□□□□□ -0.22
ATG4C-201ENST00000317868 DHFR2Q86XF0 187 aa13.68□□□□□ -0.22
ATG4C-201ENST00000317868 METTL25Q8N6Q8 603 aa13.68□□□□□ -0.22
ATG4C-201ENST00000317868 LPCAT1Q8NF37 534 aa13.68□□□□□ -0.22
ATG4C-201ENST00000317868 GRIN3AQ8TCU5 1115 aa13.68□□□□□ -0.22
ATG4C-201ENST00000317868 PDLIM5Q96HC4 596 aaKnown RBP13.68□□□□□ -0.22
ATG4C-201ENST00000317868 ZFRQ96KR1 1074 aaKnown RBP13.68□□□□□ -0.22
ATG4C-201ENST00000317868 CCM2LQ9NUG4 571 aaPredicted RBP13.68□□□□□ -0.22
ATG4C-201ENST00000317868 CMTM6Q9NX76 183 aa13.68□□□□□ -0.22
ATG4C-201ENST00000317868 OR1I1O60431 355 aa13.67□□□□□ -0.22
ATG4C-201ENST00000317868 ABLIM3O94929 683 aa13.67□□□□□ -0.22
ATG4C-201ENST00000317868 UROSP10746 265 aa13.67□□□□□ -0.22
ATG4C-201ENST00000317868 HGFP14210 728 aa13.67□□□□□ -0.22
ATG4C-201ENST00000317868 CLCN7P51798 805 aa13.67□□□□□ -0.22
ATG4C-201ENST00000317868 KIF19Q2TAC6 998 aa13.67□□□□□ -0.22
ATG4C-201ENST00000317868 VPS26BQ4G0F5 336 aa13.67□□□□□ -0.22
ATG4C-201ENST00000317868 ERMP1Q7Z2K6 904 aa13.67□□□□□ -0.22
ATG4C-201ENST00000317868 SATL1Q86VE3 508 aa13.67□□□□□ -0.22
ATG4C-201ENST00000317868 NAT14Q8WUY8 206 aa13.67□□□□□ -0.22
ATG4C-201ENST00000317868 PBXIP1Q96AQ6 731 aa13.67□□□□□ -0.22
ATG4C-201ENST00000317868 C19orf43Q9BQ61 176 aa13.67□□□□□ -0.22
ATG4C-201ENST00000317868 SEZ6LQ9BYH1 1024 aa13.67□□□□□ -0.22
ATG4C-201ENST00000317868 RNF38Q9H0F5 515 aa13.67□□□□□ -0.22
ATG4C-201ENST00000317868 COQ10BQ9H8M1 238 aa13.67□□□□□ -0.22
ATG4C-201ENST00000317868 SEMA4BQ9NPR2 832 aaPredicted RBP13.67□□□□□ -0.22
ATG4C-201ENST00000317868 OR51B4Q9Y5P0 310 aa13.67□□□□□ -0.22
ATG4C-201ENST00000317868 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.67□□□□□ -0.22
ATG4C-201ENST00000317868 NIPSNAP2O75323 286 aa13.67□□□□□ -0.22
ATG4C-201ENST00000317868 VPS26AO75436 327 aa13.67□□□□□ -0.22
ATG4C-201ENST00000317868 TMCC1O94876 653 aa13.67□□□□□ -0.22
ATG4C-201ENST00000317868 MLYCDO95822 493 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms