RNA–Protein interactions for RNA: ENST00000309615.7

APTX-201, Transcript of aprataxin, humanhuman

TSL 1 (best) BASIC

Gene APTX, Length 1,859 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-201ENST00000309615 PSAPL1Q6NUJ1 521 aa12.78□□□□□ -0.36
APTX-201ENST00000309615 DOK6Q6PKX4 331 aa12.78□□□□□ -0.36
APTX-201ENST00000309615 CENPUQ71F23 418 aa12.78□□□□□ -0.36
APTX-201ENST00000309615 SNX20Q7Z614 316 aa12.78□□□□□ -0.36
APTX-201ENST00000309615 PARGQ86W56 976 aa12.78□□□□□ -0.36
APTX-201ENST00000309615 PIANPQ8IYJ0 282 aa12.78□□□□□ -0.36
APTX-201ENST00000309615 ZBED8Q8IZ13 594 aa12.78□□□□□ -0.36
APTX-201ENST00000309615 PNPLA1Q8N8W4 532 aa12.78□□□□□ -0.36
APTX-201ENST00000309615 WDR92Q96MX6 357 aa12.78□□□□□ -0.36
APTX-201ENST00000309615 FGF22Q9HCT0 170 aa12.78□□□□□ -0.36
APTX-201ENST00000309615 MRPL40Q9NQ50 206 aaKnown RBP12.78□□□□□ -0.36
APTX-201ENST00000309615 RXFP3Q9NSD7 469 aa12.78□□□□□ -0.36
APTX-201ENST00000309615 IL1RAPL1Q9NZN1 696 aa12.78□□□□□ -0.36
APTX-201ENST00000309615 AGAP14A8MT82 685 aa12.77□□□□□ -0.37
APTX-201ENST00000309615 GOLGA8KD6RF30 607 aa12.77□□□□□ -0.37
APTX-201ENST00000309615 GOLGA8TH3BQL2 631 aa12.77□□□□□ -0.37
APTX-201ENST00000309615 USP1O94782 785 aa12.77□□□□□ -0.37
APTX-201ENST00000309615 FUCA1P04066 466 aa12.77□□□□□ -0.37
APTX-201ENST00000309615 CEACAM5P06731 702 aa12.77□□□□□ -0.37
APTX-201ENST00000309615 FOXN2P32314 431 aa12.77□□□□□ -0.37
APTX-201ENST00000309615 ARCN1P48444 511 aaKnown RBP12.77□□□□□ -0.37
APTX-201ENST00000309615 CACNG1Q06432 222 aa12.77□□□□□ -0.37
APTX-201ENST00000309615 CBLBQ13191 982 aa12.77□□□□□ -0.37
APTX-201ENST00000309615 CRYMQ14894 314 aa12.77□□□□□ -0.37
APTX-201ENST00000309615 GPRC6AQ5T6X5 926 aa12.77□□□□□ -0.37
APTX-201ENST00000309615 AFTPHQ6ULP2 937 aa12.77□□□□□ -0.37
APTX-201ENST00000309615 CCDC25Q86WR0 208 aa12.77□□□□□ -0.37
APTX-201ENST00000309615 PHYKPLQ8IUZ5 450 aa12.77□□□□□ -0.37
APTX-201ENST00000309615 IFT20Q8IY31 132 aa12.77□□□□□ -0.37
APTX-201ENST00000309615 FBXO36Q8NEA4 188 aa12.77□□□□□ -0.37
APTX-201ENST00000309615 OR56A4Q8NGH8 313 aa12.77□□□□□ -0.37
APTX-201ENST00000309615 OR4L1Q8NH43 312 aa12.77□□□□□ -0.37
APTX-201ENST00000309615 GDAP1Q8TB36 358 aa12.77□□□□□ -0.37
APTX-201ENST00000309615 TSACCQ96A04 125 aaPredicted RBP12.77□□□□□ -0.37
APTX-201ENST00000309615 LRRC39Q96DD0 335 aa12.77□□□□□ -0.37
APTX-201ENST00000309615 CFAP36Q96G28 342 aa12.77□□□□□ -0.37
APTX-201ENST00000309615 PDXPQ96GD0 296 aa12.77□□□□□ -0.37
APTX-201ENST00000309615 GTPBP2Q9BX10 602 aaKnown RBP12.77□□□□□ -0.37
APTX-201ENST00000309615 IL21RQ9HBE5 538 aa12.77□□□□□ -0.37
APTX-201ENST00000309615 PLAC1Q9HBJ0 212 aa12.77□□□□□ -0.37
APTX-201ENST00000309615 SAYSD1Q9NPB0 183 aa12.77□□□□□ -0.37
APTX-201ENST00000309615 RRAGDQ9NQL2 400 aaPredicted RBP12.77□□□□□ -0.37
APTX-201ENST00000309615 SMOXQ9NWM0 555 aa12.77□□□□□ -0.37
APTX-201ENST00000309615 DNAJC28Q9NX36 388 aa12.77□□□□□ -0.37
APTX-201ENST00000309615 ZC3H7BQ9UGR2 993 aaKnown RBP12.77□□□□□ -0.37
APTX-201ENST00000309615 CRLS1Q9UJA2 301 aa12.77□□□□□ -0.37
APTX-201ENST00000309615 PCDH15Q96QU1 1955 aa12.77□□□□□ -0.37
APTX-201ENST00000309615 PI4KAP42356 2102 aa12.77□□□□□ -0.37
APTX-201ENST00000309615 SCAMP1O15126 338 aa12.76□□□□□ -0.37
APTX-201ENST00000309615 ASMTLO95671 621 aa12.76□□□□□ -0.37
APTX-201ENST00000309615 POLBP06746 335 aa12.76□□□□□ -0.37
APTX-201ENST00000309615 SRP54P61011 504 aaKnown RBP12.76□□□□□ -0.37
APTX-201ENST00000309615 CUL1Q13616 776 aa12.76□□□□□ -0.37
APTX-201ENST00000309615 ALG11Q2TAA5 492 aa12.76□□□□□ -0.37
APTX-201ENST00000309615 GPR33Q49SQ1 333 aa12.76□□□□□ -0.37
APTX-201ENST00000309615 KIAA0930Q6ICG6 404 aaPredicted RBP12.76□□□□□ -0.37
APTX-201ENST00000309615 UNC5AQ6ZN44 842 aa12.76□□□□□ -0.37
APTX-201ENST00000309615 MARK2Q7KZI7 788 aaKnown RBP12.76□□□□□ -0.37
APTX-201ENST00000309615 TAS2R42Q7RTR8 314 aa12.76□□□□□ -0.37
APTX-201ENST00000309615 RD3Q7Z3Z2 195 aa12.76□□□□□ -0.37
APTX-201ENST00000309615 UNC5BQ8IZJ1 945 aa12.76□□□□□ -0.37
APTX-201ENST00000309615 NXPE1Q8N323 547 aa12.76□□□□□ -0.37
APTX-201ENST00000309615 DDHD1Q8NEL9 900 aa12.76□□□□□ -0.37
APTX-201ENST00000309615 OR1E3Q8WZA6 343 aa12.76□□□□□ -0.37
APTX-201ENST00000309615 CCDC97Q96F63 343 aaPredicted RBP12.76□□□□□ -0.37
APTX-201ENST00000309615 SGSM3Q96HU1 749 aa12.76□□□□□ -0.37
APTX-201ENST00000309615 NAT9Q9BTE0 207 aa12.76□□□□□ -0.37
APTX-201ENST00000309615 FAM129AQ9BZQ8 928 aa12.76□□□□□ -0.37
APTX-201ENST00000309615 ZDHHC5Q9C0B5 715 aa12.76□□□□□ -0.37
APTX-201ENST00000309615 OR2AG1Q9H205 316 aa12.76□□□□□ -0.37
APTX-201ENST00000309615 TCEAL2Q9H3H9 227 aaPredicted RBP12.76□□□□□ -0.37
APTX-201ENST00000309615 GAREM1Q9H706 876 aa12.76□□□□□ -0.37
APTX-201ENST00000309615 ERVMER34-1Q9H9K5 563 aa12.76□□□□□ -0.37
APTX-201ENST00000309615 TRIM39Q9HCM9 518 aa12.76□□□□□ -0.37
APTX-201ENST00000309615 MARCH4Q9P2E8 410 aaPredicted RBP12.76□□□□□ -0.37
APTX-201ENST00000309615 ATXN10Q9UBB4 475 aa12.76□□□□□ -0.37
APTX-201ENST00000309615 KLQ9UEF7 1012 aa12.76□□□□□ -0.37
APTX-201ENST00000309615 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.76□□□□□ -0.37
APTX-201ENST00000309615 MOSPD1Q9UJG1 213 aa12.76□□□□□ -0.37
APTX-201ENST00000309615 SLC17A4Q9Y2C5 497 aa12.76□□□□□ -0.37
APTX-201ENST00000309615 V9GYY5 206 aaPredicted RBP12.76□□□□□ -0.37
APTX-201ENST00000309615 ZFHX2Q9C0A1 2572 aaPredicted RBP12.76□□□□□ -0.37
APTX-201ENST00000309615 CACNA1EQ15878 2313 aa12.76□□□□□ -0.37
APTX-201ENST00000309615 TRBV5-4A0A0C4DH59 114 aa12.76□□□□□ -0.37
APTX-201ENST00000309615 PRSS38A1L453 326 aa12.76□□□□□ -0.37
APTX-201ENST00000309615 TNFRSF10CO14798 259 aa12.76□□□□□ -0.37
APTX-201ENST00000309615 GFRA3O60609 400 aa12.76□□□□□ -0.37
APTX-201ENST00000309615 PAMP19021 973 aa12.76□□□□□ -0.37
APTX-201ENST00000309615 KELP23276 732 aa12.76□□□□□ -0.37
APTX-201ENST00000309615 SEMA3AQ14563 771 aa12.76□□□□□ -0.37
APTX-201ENST00000309615 IL27RAQ6UWB1 636 aa12.76□□□□□ -0.37
APTX-201ENST00000309615 PRR23CQ6ZRP0 262 aa12.76□□□□□ -0.37
APTX-201ENST00000309615 ADGRG6Q86SQ4 1221 aa12.76□□□□□ -0.37
APTX-201ENST00000309615 LDB1Q86U70 411 aaPredicted RBP12.76□□□□□ -0.37
APTX-201ENST00000309615 SERPINA9Q86WD7 417 aa12.76□□□□□ -0.37
APTX-201ENST00000309615 HID1Q8IV36 788 aa12.76□□□□□ -0.37
APTX-201ENST00000309615 RBFAQ8N0V3 343 aa12.76□□□□□ -0.37
APTX-201ENST00000309615 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.76□□□□□ -0.37
APTX-201ENST00000309615 NAT14Q8WUY8 206 aa12.76□□□□□ -0.37
APTX-201ENST00000309615 ELF4Q99607 663 aaPredicted RBP12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms