RNA–Protein interactions for RNA: ENST00000306658.7

KRT28-201, Transcript of keratin 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KRT28, Length 1,685 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT28-201ENST00000306658 RFLNAQ6ZTI6 216 aa17.4■□□□□ 0.38
KRT28-201ENST00000306658 NRSN1Q8IZ57 195 aa17.4■□□□□ 0.38
KRT28-201ENST00000306658 NXNL1Q96CM4 212 aa17.4■□□□□ 0.38
KRT28-201ENST00000306658 SCYL1Q96KG9 808 aa17.4■□□□□ 0.38
KRT28-201ENST00000306658 UBXN10Q96LJ8 280 aa17.4■□□□□ 0.38
KRT28-201ENST00000306658 P2RY12Q9H244 342 aa17.4■□□□□ 0.38
KRT28-201ENST00000306658 CD84Q9UIB8 345 aa17.4■□□□□ 0.38
KRT28-201ENST00000306658 ATG2BQ96BY7 2078 aa17.39■□□□□ 0.38
KRT28-201ENST00000306658 E5RI56 91 aa17.39■□□□□ 0.37
KRT28-201ENST00000306658 H3BMM5 538 aa17.39■□□□□ 0.37
KRT28-201ENST00000306658 WNT9AO14904 365 aa17.39■□□□□ 0.37
KRT28-201ENST00000306658 DNAJC6O75061 913 aa17.39■□□□□ 0.37
KRT28-201ENST00000306658 CCDC166P0CW27 439 aa17.39■□□□□ 0.37
KRT28-201ENST00000306658 SRFP11831 508 aa17.39■□□□□ 0.37
KRT28-201ENST00000306658 CPA3P15088 417 aa17.39■□□□□ 0.37
KRT28-201ENST00000306658 P2RY2P41231 377 aa17.39■□□□□ 0.37
KRT28-201ENST00000306658 CSHL1Q14406 222 aa17.39■□□□□ 0.37
KRT28-201ENST00000306658 ITIH4Q14624 930 aa17.39■□□□□ 0.37
KRT28-201ENST00000306658 ZNF284Q2VY69 593 aa17.39■□□□□ 0.37
KRT28-201ENST00000306658 FBXO43Q4G163 708 aa17.39■□□□□ 0.37
KRT28-201ENST00000306658 ATG16L1Q676U5 607 aa17.39■□□□□ 0.37
KRT28-201ENST00000306658 ZNF776Q68DI1 518 aaPredicted RBP17.39■□□□□ 0.37
KRT28-201ENST00000306658 UGT3A1Q6NUS8 523 aa17.39■□□□□ 0.37
KRT28-201ENST00000306658 TECPR1Q7Z6L1 1165 aa17.39■□□□□ 0.37
KRT28-201ENST00000306658 IL17RCQ8NAC3 791 aa17.39■□□□□ 0.37
KRT28-201ENST00000306658 OR2T3Q8NH03 318 aa17.39■□□□□ 0.37
KRT28-201ENST00000306658 RAB3IL1Q8TBN0 382 aa17.39■□□□□ 0.37
KRT28-201ENST00000306658 RDH11Q8TC12 318 aa17.39■□□□□ 0.37
KRT28-201ENST00000306658 SREK1Q8WXA9 508 aaKnown RBP17.39■□□□□ 0.37
KRT28-201ENST00000306658 KCNJ9Q92806 393 aa17.39■□□□□ 0.37
KRT28-201ENST00000306658 ERLEC1Q96DZ1 483 aa17.39■□□□□ 0.37
KRT28-201ENST00000306658 COPS8Q99627 209 aa17.39■□□□□ 0.37
KRT28-201ENST00000306658 ZSCAN5AQ9BUG6 496 aa17.39■□□□□ 0.37
KRT28-201ENST00000306658 WRAP53Q9BUR4 548 aaKnown RBP17.39■□□□□ 0.37
KRT28-201ENST00000306658 SLC2A4RGQ9NR83 387 aa17.39■□□□□ 0.37
KRT28-201ENST00000306658 ZDHHC3Q9NYG2 299 aa17.39■□□□□ 0.37
KRT28-201ENST00000306658 SIRPGQ9P1W8 387 aa17.39■□□□□ 0.37
KRT28-201ENST00000306658 COPG2Q9UBF2 871 aa17.39■□□□□ 0.37
KRT28-201ENST00000306658 GNPTGQ9UJJ9 305 aa17.39■□□□□ 0.37
KRT28-201ENST00000306658 ITM2BQ9Y287 266 aa17.39■□□□□ 0.37
KRT28-201ENST00000306658 EYSQ5T1H1 3165 aa17.39■□□□□ 0.37
KRT28-201ENST00000306658 KLF11O14901 512 aa17.39■□□□□ 0.37
KRT28-201ENST00000306658 NARSO43776 548 aaKnown RBP17.39■□□□□ 0.37
KRT28-201ENST00000306658 WISP3O95389 354 aaPredicted RBP17.39■□□□□ 0.37
KRT28-201ENST00000306658 KLF8O95600 359 aaPredicted RBP17.39■□□□□ 0.37
KRT28-201ENST00000306658 CHRM3P20309 590 aa17.39■□□□□ 0.37
KRT28-201ENST00000306658 DRD4P21917 467 aa17.39■□□□□ 0.37
KRT28-201ENST00000306658 NSG1P42857 185 aa17.39■□□□□ 0.37
KRT28-201ENST00000306658 TIAL1Q01085 375 aaKnown RBP eCLIP17.39■□□□□ 0.37
KRT28-201ENST00000306658 CNTN1Q12860 1018 aa17.39■□□□□ 0.37
KRT28-201ENST00000306658 TMEM52BQ4KMG9 183 aa17.39■□□□□ 0.37
KRT28-201ENST00000306658 SLC44A4Q53GD3 710 aa17.39■□□□□ 0.37
KRT28-201ENST00000306658 CTSL3PQ5NE16 218 aa17.39■□□□□ 0.37
KRT28-201ENST00000306658 PTRHD1Q6GMV3 140 aaKnown RBP17.39■□□□□ 0.37
KRT28-201ENST00000306658 LRRC8EQ6NSJ5 796 aa17.39■□□□□ 0.37
KRT28-201ENST00000306658 PIM3Q86V86 326 aa17.39■□□□□ 0.37
KRT28-201ENST00000306658 FSTL5Q8N475 847 aaPredicted RBP17.39■□□□□ 0.37
KRT28-201ENST00000306658 TRAM1L1Q8N609 369 aa17.39■□□□□ 0.37
KRT28-201ENST00000306658 HEXDCQ8WVB3 486 aa17.39■□□□□ 0.37
KRT28-201ENST00000306658 SCAMP4Q969E2 229 aa17.39■□□□□ 0.37
KRT28-201ENST00000306658 GPR78Q96P69 363 aa17.39■□□□□ 0.37
KRT28-201ENST00000306658 MRPL57Q9BQC6 102 aaKnown RBP17.39■□□□□ 0.37
KRT28-201ENST00000306658 MECRQ9BV79 373 aa17.39■□□□□ 0.37
KRT28-201ENST00000306658 PITPNM3Q9BZ71 974 aa17.39■□□□□ 0.37
KRT28-201ENST00000306658 IGSF5Q9NSI5 407 aa17.39■□□□□ 0.37
KRT28-201ENST00000306658 SMOXQ9NWM0 555 aa17.39■□□□□ 0.37
KRT28-201ENST00000306658 PLK4O00444 970 aa17.38■□□□□ 0.37
KRT28-201ENST00000306658 MID1O15344 667 aa17.38■□□□□ 0.37
KRT28-201ENST00000306658 SPINT1O43278 529 aa17.38■□□□□ 0.37
KRT28-201ENST00000306658 RBP1P09455 135 aa17.38■□□□□ 0.37
KRT28-201ENST00000306658 ZNF37AP17032 561 aaPredicted RBP17.38■□□□□ 0.37
KRT28-201ENST00000306658 BGNP21810 368 aa17.38■□□□□ 0.37
KRT28-201ENST00000306658 GLRBP48167 497 aa17.38■□□□□ 0.37
KRT28-201ENST00000306658 DLG1Q12959 904 aa17.38■□□□□ 0.37
KRT28-201ENST00000306658 ACAP2Q15057 778 aa17.38■□□□□ 0.37
KRT28-201ENST00000306658 HENMT1Q5T8I9 393 aaKnown RBP17.38■□□□□ 0.37
KRT28-201ENST00000306658 CYP2U1Q7Z449 544 aa17.38■□□□□ 0.37
KRT28-201ENST00000306658 SPATA6LQ8N4H0 392 aa17.38■□□□□ 0.37
KRT28-201ENST00000306658 TXNDC5Q8NBS9 432 aaKnown RBP17.38■□□□□ 0.37
KRT28-201ENST00000306658 PPP1R14CQ8TAE6 165 aa17.38■□□□□ 0.37
KRT28-201ENST00000306658 ZNF473Q8WTR7 871 aaKnown RBP17.38■□□□□ 0.37
KRT28-201ENST00000306658 FAM3CQ92520 227 aa17.38■□□□□ 0.37
KRT28-201ENST00000306658 COQ10AQ96MF6 247 aa17.38■□□□□ 0.37
KRT28-201ENST00000306658 GPR21Q99679 349 aa17.38■□□□□ 0.37
KRT28-201ENST00000306658 RIOK2Q9BVS4 552 aaKnown RBP17.38■□□□□ 0.37
KRT28-201ENST00000306658 MRPL46Q9H2W6 279 aaKnown RBP17.38■□□□□ 0.37
KRT28-201ENST00000306658 FGFR1OP2Q9NVK5 253 aa17.38■□□□□ 0.37
KRT28-201ENST00000306658 TRMT6Q9UJA5 497 aaKnown RBP17.38■□□□□ 0.37
KRT28-201ENST00000306658 OAS3Q9Y6K5 1087 aaKnown RBP17.38■□□□□ 0.37
KRT28-201ENST00000306658 HOXB2P14652 356 aa17.37■□□□□ 0.37
KRT28-201ENST00000306658 ALDH3A1P30838 453 aa17.37■□□□□ 0.37
KRT28-201ENST00000306658 CA5AP35218 305 aa17.37■□□□□ 0.37
KRT28-201ENST00000306658 PCLAFQ15004 111 aa17.37■□□□□ 0.37
KRT28-201ENST00000306658 TMEM207Q6UWW9 146 aa17.37■□□□□ 0.37
KRT28-201ENST00000306658 NKAPQ8N5F7 415 aaKnown RBP17.37■□□□□ 0.37
KRT28-201ENST00000306658 CXorf40AQ8TE69 158 aa17.37■□□□□ 0.37
KRT28-201ENST00000306658 ANKRD49Q8WVL7 239 aa17.37■□□□□ 0.37
KRT28-201ENST00000306658 FAM136AQ96C01 138 aa17.37■□□□□ 0.37
KRT28-201ENST00000306658 AP2M1Q96CW1 435 aa17.37■□□□□ 0.37
KRT28-201ENST00000306658 BOCQ9BWV1 1114 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms