RNA–Protein interactions for RNA: ENST00000306177.9

USP42-201, Transcript of ubiquitin specific peptidase 42, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP42, Length 5,155 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-201ENST00000306177 BMP7P18075 431 aa15.85■□□□□ 0.13
USP42-201ENST00000306177 CLK3P49761 638 aaKnown RBP15.85■□□□□ 0.13
USP42-201ENST00000306177 GDF10P55107 478 aa15.85■□□□□ 0.13
USP42-201ENST00000306177 LCP2Q13094 533 aa15.85■□□□□ 0.13
USP42-201ENST00000306177 CRHR2Q13324 411 aa15.85■□□□□ 0.13
USP42-201ENST00000306177 RNF44Q7L0R7 432 aa15.85■□□□□ 0.13
USP42-201ENST00000306177 TMPRSS11BQ86T26 416 aa15.85■□□□□ 0.13
USP42-201ENST00000306177 ZNF671Q8TAW3 534 aa15.85■□□□□ 0.13
USP42-201ENST00000306177 PPP1R14AQ96A00 147 aa15.85■□□□□ 0.13
USP42-201ENST00000306177 TLCD1Q96CP7 247 aa15.85■□□□□ 0.13
USP42-201ENST00000306177 DNAJC1Q96KC8 554 aaKnown RBP15.85■□□□□ 0.13
USP42-201ENST00000306177 FAM83DQ9H4H8 585 aa15.85■□□□□ 0.13
USP42-201ENST00000306177 NMUR1Q9HB89 426 aa15.85■□□□□ 0.13
USP42-201ENST00000306177 PSMD13Q9UNM6 376 aa15.85■□□□□ 0.13
USP42-201ENST00000306177 ERGIC3Q9Y282 383 aa15.85■□□□□ 0.13
USP42-201ENST00000306177 SLC38A8A6NNN8 435 aa15.85■□□□□ 0.13
USP42-201ENST00000306177 ASNA1O43681 348 aa15.85■□□□□ 0.13
USP42-201ENST00000306177 CLDN9O95484 217 aa15.85■□□□□ 0.13
USP42-201ENST00000306177 SOWAHAQ2M3V2 549 aa15.85■□□□□ 0.13
USP42-201ENST00000306177 ASTE1Q2TB18 679 aaPredicted RBP15.85■□□□□ 0.13
USP42-201ENST00000306177 HDDC2Q7Z4H3 204 aa15.85■□□□□ 0.13
USP42-201ENST00000306177 SPOCK2Q92563 424 aa15.85■□□□□ 0.13
USP42-201ENST00000306177 PSMG2Q969U7 264 aa15.85■□□□□ 0.13
USP42-201ENST00000306177 TRIT1Q9H3H1 467 aaKnown RBP15.85■□□□□ 0.13
USP42-201ENST00000306177 IPPKQ9H8X2 491 aa15.85■□□□□ 0.13
USP42-201ENST00000306177 NR2E1Q9Y466 385 aa15.85■□□□□ 0.13
USP42-201ENST00000306177 PTPRJQ12913 1337 aa15.85■□□□□ 0.13
USP42-201ENST00000306177 C2orf71A6NGG8 1288 aa15.85■□□□□ 0.13
USP42-201ENST00000306177 PER2O15055 1255 aa15.85■□□□□ 0.13
USP42-201ENST00000306177 SLC28A2O43868 658 aa15.85■□□□□ 0.13
USP42-201ENST00000306177 PGM3O95394 542 aa15.85■□□□□ 0.13
USP42-201ENST00000306177 GOT2P00505 430 aaKnown RBP15.85■□□□□ 0.13
USP42-201ENST00000306177 BUD31P41223 144 aaPredicted RBP15.85■□□□□ 0.13
USP42-201ENST00000306177 CLCQ05315 142 aa15.85■□□□□ 0.13
USP42-201ENST00000306177 FAM124AQ86V42 546 aa15.85■□□□□ 0.13
USP42-201ENST00000306177 CLHC1Q8NHS4 586 aa15.85■□□□□ 0.13
USP42-201ENST00000306177 TTLL2Q9BWV7 592 aa15.85■□□□□ 0.13
USP42-201ENST00000306177 TNKS2Q9H2K2 1166 aa15.85■□□□□ 0.13
USP42-201ENST00000306177 C3orf14Q9HBI5 128 aa15.85■□□□□ 0.13
USP42-201ENST00000306177 ADGRE2Q9UHX3 823 aa15.85■□□□□ 0.13
USP42-201ENST00000306177 KIR3DL1P43629 444 aa15.85■□□□□ 0.13
USP42-201ENST00000306177 CCR3P51677 355 aa15.85■□□□□ 0.13
USP42-201ENST00000306177 DPYSQ14117 519 aa15.85■□□□□ 0.13
USP42-201ENST00000306177 CIR1Q86X95 450 aaPredicted RBP15.85■□□□□ 0.13
USP42-201ENST00000306177 DSELQ8IZU8 1212 aa15.85■□□□□ 0.13
USP42-201ENST00000306177 AMER2Q8N7J2 671 aa15.85■□□□□ 0.13
USP42-201ENST00000306177 RBM15BQ8NDT2 890 aaKnown RBP15.85■□□□□ 0.13
USP42-201ENST00000306177 PHC3Q8NDX5 983 aa15.85■□□□□ 0.13
USP42-201ENST00000306177 TDRD1Q9BXT4 1180 aaKnown RBP15.85■□□□□ 0.13
USP42-201ENST00000306177 SEZ6LQ9BYH1 1024 aa15.85■□□□□ 0.13
USP42-201ENST00000306177 C12orf65Q9H3J6 166 aaKnown RBP15.85■□□□□ 0.13
USP42-201ENST00000306177 MIOSQ9NXC5 875 aa15.85■□□□□ 0.13
USP42-201ENST00000306177 ZMYND8Q9ULU4 1186 aaPredicted RBP15.85■□□□□ 0.13
USP42-201ENST00000306177 TM7SF2O76062 418 aa15.84■□□□□ 0.13
USP42-201ENST00000306177 POP4O95707 220 aaKnown RBP15.84■□□□□ 0.13
USP42-201ENST00000306177 ASMTP46597 345 aa15.84■□□□□ 0.13
USP42-201ENST00000306177 MZT2AQ6P582 158 aa15.84■□□□□ 0.13
USP42-201ENST00000306177 GET4Q7L5D6 327 aaPredicted RBP15.84■□□□□ 0.13
USP42-201ENST00000306177 KLHL23Q8NBE8 558 aa15.84■□□□□ 0.13
USP42-201ENST00000306177 FAM13CQ8NE31 585 aa15.84■□□□□ 0.13
USP42-201ENST00000306177 AP2M1Q96CW1 435 aa15.84■□□□□ 0.13
USP42-201ENST00000306177 TEFMQ96QE5 360 aaKnown RBP15.84■□□□□ 0.13
USP42-201ENST00000306177 NOL11Q9H8H0 719 aaKnown RBP15.84■□□□□ 0.13
USP42-201ENST00000306177 TXNRD2Q9NNW7 524 aa15.84■□□□□ 0.13
USP42-201ENST00000306177 SLC20A2Q08357 652 aa15.84■□□□□ 0.13
USP42-201ENST00000306177 BNIP1Q12981 228 aa15.84■□□□□ 0.13
USP42-201ENST00000306177 DCTN2Q13561 401 aaKnown RBP15.84■□□□□ 0.13
USP42-201ENST00000306177 CA9Q16790 459 aa15.84■□□□□ 0.13
USP42-201ENST00000306177 PLA2G4EQ3MJ16 856 aa15.84■□□□□ 0.13
USP42-201ENST00000306177 DEF8Q6ZN54 512 aa15.84■□□□□ 0.13
USP42-201ENST00000306177 OTOP2Q7RTS6 562 aa15.84■□□□□ 0.13
USP42-201ENST00000306177 DBF4BQ8NFT6 615 aa15.84■□□□□ 0.13
USP42-201ENST00000306177 BRSK1Q8TDC3 778 aa15.84■□□□□ 0.13
USP42-201ENST00000306177 SEMA3GQ9NS98 782 aa15.84■□□□□ 0.13
USP42-201ENST00000306177 FETUBQ9UGM5 382 aa15.84■□□□□ 0.13
USP42-201ENST00000306177 MRPS33Q9Y291 106 aaKnown RBP15.84■□□□□ 0.13
USP42-201ENST00000306177 TIMM22Q9Y584 194 aa15.84■□□□□ 0.13
USP42-201ENST00000306177 CPQQ9Y646 472 aa15.84■□□□□ 0.13
USP42-201ENST00000306177 ONECUT3O60422 494 aaPredicted RBP15.84■□□□□ 0.13
USP42-201ENST00000306177 RPIAP49247 311 aa15.84■□□□□ 0.13
USP42-201ENST00000306177 TAF13Q15543 124 aa15.84■□□□□ 0.13
USP42-201ENST00000306177 CNTD1Q8N815 330 aa15.84■□□□□ 0.13
USP42-201ENST00000306177 CLEC4CQ8WTT0 213 aa15.84■□□□□ 0.13
USP42-201ENST00000306177 RSPH9Q9H1X1 276 aaPredicted RBP15.84■□□□□ 0.13
USP42-201ENST00000306177 CRNNQ9UBG3 495 aaPredicted RBP15.84■□□□□ 0.13
USP42-201ENST00000306177 RWDD3Q9Y3V2 267 aa15.84■□□□□ 0.13
USP42-201ENST00000306177 G3V2T6 193 aa15.84■□□□□ 0.13
USP42-201ENST00000306177 SLC7A4O43246 635 aa15.84■□□□□ 0.13
USP42-201ENST00000306177 ALG11Q2TAA5 492 aa15.84■□□□□ 0.13
USP42-201ENST00000306177 TIGD5Q53EQ6 642 aa15.84■□□□□ 0.13
USP42-201ENST00000306177 LACTB2Q53H82 288 aaPredicted RBP15.84■□□□□ 0.13
USP42-201ENST00000306177 GALNT18Q6P9A2 607 aa15.84■□□□□ 0.13
USP42-201ENST00000306177 KLHL35Q6PF15 583 aa15.84■□□□□ 0.13
USP42-201ENST00000306177 FAM220AQ7Z4H9 259 aa15.84■□□□□ 0.13
USP42-201ENST00000306177 FBXO22Q8NEZ5 403 aa15.84■□□□□ 0.13
USP42-201ENST00000306177 NTAN1Q96AB6 310 aa15.84■□□□□ 0.13
USP42-201ENST00000306177 MUC13Q9H3R2 512 aa15.84■□□□□ 0.13
USP42-201ENST00000306177 CLK4Q9HAZ1 481 aaKnown RBP15.84■□□□□ 0.13
USP42-201ENST00000306177 S100A14Q9HCY8 104 aa15.84■□□□□ 0.13
USP42-201ENST00000306177 CCNB1IP1Q9NPC3 277 aa15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms