RNA–Protein interactions for RNA: ENST00000294172.6

NXF1-201, Transcript of nuclear RNA export factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NXF1, Length 2,346 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-201ENST00000294172 HTR3DQ70Z44 454 aa13.9□□□□□ -0.18
NXF1-201ENST00000294172 LARP4Q71RC2 724 aaKnown RBP eCLIP13.9□□□□□ -0.18
NXF1-201ENST00000294172 FAM217AQ8IXS0 508 aa13.9□□□□□ -0.18
NXF1-201ENST00000294172 FIBCD1Q8N539 461 aa13.9□□□□□ -0.18
NXF1-201ENST00000294172 PCDH20Q8N6Y1 951 aaKnown RBP13.9□□□□□ -0.18
NXF1-201ENST00000294172 OR9I1Q8NGQ6 314 aa13.9□□□□□ -0.18
NXF1-201ENST00000294172 TWIST2Q8WVJ9 160 aa13.9□□□□□ -0.18
NXF1-201ENST00000294172 GCNAQ96QF7 691 aa13.9□□□□□ -0.18
NXF1-201ENST00000294172 AKTIPQ9H8T0 292 aa13.9□□□□□ -0.18
NXF1-201ENST00000294172 UTP6Q9NYH9 597 aaKnown RBP13.9□□□□□ -0.18
NXF1-201ENST00000294172 MAFFQ9ULX9 164 aa13.9□□□□□ -0.18
NXF1-201ENST00000294172 SUFUQ9UMX1 484 aa13.9□□□□□ -0.18
NXF1-201ENST00000294172 PLXNA4Q9HCM2 1894 aa13.89□□□□□ -0.19
NXF1-201ENST00000294172 C1orf232A0A0U1RR37 186 aa13.89□□□□□ -0.19
NXF1-201ENST00000294172 A0A1B0GTL3 188 aa13.89□□□□□ -0.19
NXF1-201ENST00000294172 CCL16O15467 120 aa13.89□□□□□ -0.19
NXF1-201ENST00000294172 PRAMEF1O95521 474 aa13.89□□□□□ -0.19
NXF1-201ENST00000294172 TSPAN12O95859 305 aa13.89□□□□□ -0.19
NXF1-201ENST00000294172 HSPA1AP0DMV8 641 aaKnown RBP13.89□□□□□ -0.19
NXF1-201ENST00000294172 HSPA1BP0DMV9 641 aaKnown RBP13.89□□□□□ -0.19
NXF1-201ENST00000294172 TCN1P20061 433 aaPredicted RBP13.89□□□□□ -0.19
NXF1-201ENST00000294172 NME5P56597 212 aa13.89□□□□□ -0.19
NXF1-201ENST00000294172 SLC7A9P82251 487 aa13.89□□□□□ -0.19
NXF1-201ENST00000294172 CREMQ03060 361 aa13.89□□□□□ -0.19
NXF1-201ENST00000294172 LCP2Q13094 533 aa13.89□□□□□ -0.19
NXF1-201ENST00000294172 CEACAM7Q14002 265 aa13.89□□□□□ -0.19
NXF1-201ENST00000294172 ANKS6Q68DC2 871 aa13.89□□□□□ -0.19
NXF1-201ENST00000294172 ANO7Q6IWH7 933 aa13.89□□□□□ -0.19
NXF1-201ENST00000294172 IZUMO2Q6UXV1 221 aa13.89□□□□□ -0.19
NXF1-201ENST00000294172 CMTM8Q8IZV2 173 aa13.89□□□□□ -0.19
NXF1-201ENST00000294172 ELMOD1Q8N336 334 aa13.89□□□□□ -0.19
NXF1-201ENST00000294172 KLHL23Q8NBE8 558 aa13.89□□□□□ -0.19
NXF1-201ENST00000294172 SLC22A17Q8WUG5 538 aa13.89□□□□□ -0.19
NXF1-201ENST00000294172 ACDQ96AP0 544 aa13.89□□□□□ -0.19
NXF1-201ENST00000294172 ESAMQ96AP7 390 aa13.89□□□□□ -0.19
NXF1-201ENST00000294172 CCDC97Q96F63 343 aaPredicted RBP13.89□□□□□ -0.19
NXF1-201ENST00000294172 ZNF184Q99676 751 aaPredicted RBP13.89□□□□□ -0.19
NXF1-201ENST00000294172 LRRC3Q9BY71 257 aa13.89□□□□□ -0.19
NXF1-201ENST00000294172 C11orf49Q9H6J7 331 aa13.89□□□□□ -0.19
NXF1-201ENST00000294172 ZFYVE1Q9HBF4 777 aa13.89□□□□□ -0.19
NXF1-201ENST00000294172 KIAA1522Q9P206 1035 aaPredicted RBP13.89□□□□□ -0.19
NXF1-201ENST00000294172 BTRCQ9Y297 605 aa13.89□□□□□ -0.19
NXF1-201ENST00000294172 PRRC2BQ5JSZ5 2229 aaKnown RBP13.89□□□□□ -0.19
NXF1-201ENST00000294172 GOLGA8CPA6NN73 597 aa13.89□□□□□ -0.19
NXF1-201ENST00000294172 LEFTY2O00292 366 aa13.89□□□□□ -0.19
NXF1-201ENST00000294172 SNX2O60749 519 aa13.89□□□□□ -0.19
NXF1-201ENST00000294172 EFCAB14O75071 495 aa13.89□□□□□ -0.19
NXF1-201ENST00000294172 ESR1P03372 595 aa13.89□□□□□ -0.19
NXF1-201ENST00000294172 FGF4P08620 206 aa13.89□□□□□ -0.19
NXF1-201ENST00000294172 LINC00032P0C843 101 aa13.89□□□□□ -0.19
NXF1-201ENST00000294172 ITGB6P18564 788 aa13.89□□□□□ -0.19
NXF1-201ENST00000294172 XRCC1P18887 633 aaPredicted RBP13.89□□□□□ -0.19
NXF1-201ENST00000294172 CLCN4P51793 760 aa13.89□□□□□ -0.19
NXF1-201ENST00000294172 SEMG2Q02383 582 aa13.89□□□□□ -0.19
NXF1-201ENST00000294172 STX5Q13190 355 aa13.89□□□□□ -0.19
NXF1-201ENST00000294172 MAPRE2Q15555 327 aa13.89□□□□□ -0.19
NXF1-201ENST00000294172 ZNF423Q2M1K9 1284 aa13.89□□□□□ -0.19
NXF1-201ENST00000294172 KIF19Q2TAC6 998 aa13.89□□□□□ -0.19
NXF1-201ENST00000294172 PIGGQ5H8A4 983 aa13.89□□□□□ -0.19
NXF1-201ENST00000294172 RNF111Q6ZNA4 994 aa13.89□□□□□ -0.19
NXF1-201ENST00000294172 DHDDSQ86SQ9 333 aa13.89□□□□□ -0.19
NXF1-201ENST00000294172 TMEM199Q8N511 208 aa13.89□□□□□ -0.19
NXF1-201ENST00000294172 KREMEN2Q8NCW0 462 aa13.89□□□□□ -0.19
NXF1-201ENST00000294172 KCNJ9Q92806 393 aa13.89□□□□□ -0.19
NXF1-201ENST00000294172 SLC46A2Q9BY10 475 aa13.89□□□□□ -0.19
NXF1-201ENST00000294172 ADA2Q9NZK5 511 aa13.89□□□□□ -0.19
NXF1-201ENST00000294172 CD274Q9NZQ7 290 aa13.89□□□□□ -0.19
NXF1-201ENST00000294172 ZNF510Q9Y2H8 683 aa13.89□□□□□ -0.19
NXF1-201ENST00000294172 SMNDC1O75940 238 aaKnown RBP eCLIP13.88□□□□□ -0.19
NXF1-201ENST00000294172 CLDN7O95471 211 aa13.88□□□□□ -0.19
NXF1-201ENST00000294172 HNF1BP35680 557 aa13.88□□□□□ -0.19
NXF1-201ENST00000294172 CTSOP43234 321 aaPredicted RBP13.88□□□□□ -0.19
NXF1-201ENST00000294172 STK19P49842 368 aaPredicted RBP13.88□□□□□ -0.19
NXF1-201ENST00000294172 STX1BP61266 288 aa13.88□□□□□ -0.19
NXF1-201ENST00000294172 ECT2LQ008S8 904 aa13.88□□□□□ -0.19
NXF1-201ENST00000294172 FLOT2Q14254 428 aa13.88□□□□□ -0.19
NXF1-201ENST00000294172 PLEKHG6Q3KR16 790 aa13.88□□□□□ -0.19
NXF1-201ENST00000294172 DGKKQ5KSL6 1271 aa13.88□□□□□ -0.19
NXF1-201ENST00000294172 KANK2Q63ZY3 851 aa13.88□□□□□ -0.19
NXF1-201ENST00000294172 PAOXQ6QHF9 649 aa13.88□□□□□ -0.19
NXF1-201ENST00000294172 SERPINA9Q86WD7 417 aa13.88□□□□□ -0.19
NXF1-201ENST00000294172 GPSM1Q86YR5 675 aa13.88□□□□□ -0.19
NXF1-201ENST00000294172 FAM156AQ8NDB6 213 aa13.88□□□□□ -0.19
NXF1-201ENST00000294172 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.88□□□□□ -0.19
NXF1-201ENST00000294172 TUBGCP3Q96CW5 907 aa13.88□□□□□ -0.19
NXF1-201ENST00000294172 ASB8Q9H765 288 aa13.88□□□□□ -0.19
NXF1-201ENST00000294172 MRGBPQ9NV56 204 aa13.88□□□□□ -0.19
NXF1-201ENST00000294172 HCFC1R1Q9NWW0 138 aa13.88□□□□□ -0.19
NXF1-201ENST00000294172 ADAMTS6Q9UKP5 1117 aa13.88□□□□□ -0.19
NXF1-201ENST00000294172 INTS6Q9UL03 887 aaKnown RBP13.88□□□□□ -0.19
NXF1-201ENST00000294172 TIMM22Q9Y584 194 aa13.88□□□□□ -0.19
NXF1-201ENST00000294172 A0A0J9YYE9 177 aa13.87□□□□□ -0.19
NXF1-201ENST00000294172 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.87□□□□□ -0.19
NXF1-201ENST00000294172 CARNS1A5YM72 827 aa13.87□□□□□ -0.19
NXF1-201ENST00000294172 PRMT5O14744 637 aaPredicted RBP13.87□□□□□ -0.19
NXF1-201ENST00000294172 LIN7AO14910 233 aaPredicted RBP13.87□□□□□ -0.19
NXF1-201ENST00000294172 TRBC1P01850 177 aa13.87□□□□□ -0.19
NXF1-201ENST00000294172 ADH1AP07327 375 aa13.87□□□□□ -0.19
NXF1-201ENST00000294172 SNRPB2P08579 225 aaKnown RBP13.87□□□□□ -0.19
NXF1-201ENST00000294172 ALDOCP09972 364 aaKnown RBP13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms