RNA–Protein interactions for RNA: ENST00000286749.3

SLC28A1-201, Transcript of solute carrier family 28 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC28A1, Length 2,636 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-201ENST00000286749 CLEC11AQ9Y240 323 aa13.16□□□□□ -0.3
SLC28A1-201ENST00000286749 TLR6Q9Y2C9 796 aa13.16□□□□□ -0.3
SLC28A1-201ENST00000286749 SLC45A1Q9Y2W3 748 aa13.16□□□□□ -0.3
SLC28A1-201ENST00000286749 CCDC154A6NI56 674 aa13.15□□□□□ -0.3
SLC28A1-201ENST00000286749 NCF1BA6NI72 391 aaPredicted RBP13.15□□□□□ -0.3
SLC28A1-201ENST00000286749 NCF1CA8MVU1 366 aaPredicted RBP13.15□□□□□ -0.3
SLC28A1-201ENST00000286749 VPS4BO75351 444 aa13.15□□□□□ -0.3
SLC28A1-201ENST00000286749 ECI2O75521 394 aa13.15□□□□□ -0.3
SLC28A1-201ENST00000286749 C1RP00736 705 aa13.15□□□□□ -0.3
SLC28A1-201ENST00000286749 NCF1P14598 390 aaPredicted RBP13.15□□□□□ -0.3
SLC28A1-201ENST00000286749 MAPK10P53779 464 aa13.15□□□□□ -0.3
SLC28A1-201ENST00000286749 TSNQ15631 228 aaKnown RBP13.15□□□□□ -0.3
SLC28A1-201ENST00000286749 MAPRE1Q15691 268 aaKnown RBP13.15□□□□□ -0.3
SLC28A1-201ENST00000286749 SPATS1Q496A3 300 aa13.15□□□□□ -0.3
SLC28A1-201ENST00000286749 OGFOD2Q6N063 350 aa13.15□□□□□ -0.3
SLC28A1-201ENST00000286749 MSANTD2Q6P1R3 559 aa13.15□□□□□ -0.3
SLC28A1-201ENST00000286749 TAF2Q6P1X5 1199 aa13.15□□□□□ -0.3
SLC28A1-201ENST00000286749 XKR5Q6UX68 686 aa13.15□□□□□ -0.3
SLC28A1-201ENST00000286749 SPATA19Q7Z5L4 167 aa13.15□□□□□ -0.3
SLC28A1-201ENST00000286749 ANKRD23Q86SG2 305 aa13.15□□□□□ -0.3
SLC28A1-201ENST00000286749 CIR1Q86X95 450 aaPredicted RBP13.15□□□□□ -0.3
SLC28A1-201ENST00000286749 THEM5Q8N1Q8 247 aa13.15□□□□□ -0.3
SLC28A1-201ENST00000286749 GPR150Q8NGU9 434 aa13.15□□□□□ -0.3
SLC28A1-201ENST00000286749 OR4L1Q8NH43 312 aa13.15□□□□□ -0.3
SLC28A1-201ENST00000286749 RSPH1Q8WYR4 309 aa13.15□□□□□ -0.3
SLC28A1-201ENST00000286749 KIAA1191Q96A73 305 aa13.15□□□□□ -0.3
SLC28A1-201ENST00000286749 BIRC7Q96CA5 298 aa13.15□□□□□ -0.3
SLC28A1-201ENST00000286749 CYP2S1Q96SQ9 504 aa13.15□□□□□ -0.3
SLC28A1-201ENST00000286749 KATNAL1Q9BW62 490 aa13.15□□□□□ -0.3
SLC28A1-201ENST00000286749 AP5M1Q9H0R1 490 aa13.15□□□□□ -0.3
SLC28A1-201ENST00000286749 POPDC3Q9HBV1 291 aa13.15□□□□□ -0.3
SLC28A1-201ENST00000286749 TMEM248Q9NWD8 314 aa13.15□□□□□ -0.3
SLC28A1-201ENST00000286749 PKD2L2Q9NZM6 624 aa13.15□□□□□ -0.3
SLC28A1-201ENST00000286749 M0QZQ0 153 aa13.15□□□□□ -0.3
SLC28A1-201ENST00000286749 CDC7O00311 574 aa13.15□□□□□ -0.3
SLC28A1-201ENST00000286749 ZSCAN9O15535 394 aaPredicted RBP13.15□□□□□ -0.3
SLC28A1-201ENST00000286749 EEDO75530 441 aaKnown RBP13.15□□□□□ -0.3
SLC28A1-201ENST00000286749 RHOBTB1O94844 696 aa13.15□□□□□ -0.3
SLC28A1-201ENST00000286749 PRR35P0CG20 571 aa13.15□□□□□ -0.3
SLC28A1-201ENST00000286749 IMPDH2P12268 514 aa13.15□□□□□ -0.3
SLC28A1-201ENST00000286749 HOXB8P17481 243 aaPredicted RBP13.15□□□□□ -0.3
SLC28A1-201ENST00000286749 HRH2P25021 359 aa13.15□□□□□ -0.3
SLC28A1-201ENST00000286749 HOXC8P31273 242 aa13.15□□□□□ -0.3
SLC28A1-201ENST00000286749 TTKP33981 857 aa13.15□□□□□ -0.3
SLC28A1-201ENST00000286749 AGTR2P50052 363 aa13.15□□□□□ -0.3
SLC28A1-201ENST00000286749 STC1P52823 247 aa13.15□□□□□ -0.3
SLC28A1-201ENST00000286749 TBX4P57082 545 aa13.15□□□□□ -0.3
SLC28A1-201ENST00000286749 ANKS6Q68DC2 871 aa13.15□□□□□ -0.3
SLC28A1-201ENST00000286749 NANOGP8Q6NSW7 305 aa13.15□□□□□ -0.3
SLC28A1-201ENST00000286749 USP51Q70EK9 711 aa13.15□□□□□ -0.3
SLC28A1-201ENST00000286749 RBM12BQ8IXT5 1001 aaKnown RBP13.15□□□□□ -0.3
SLC28A1-201ENST00000286749 PAPD5Q8NDF8 572 aaKnown RBP13.15□□□□□ -0.3
SLC28A1-201ENST00000286749 STAG3L4Q8TBR4 150 aa13.15□□□□□ -0.3
SLC28A1-201ENST00000286749 TBC1D15Q8TC07 691 aa13.15□□□□□ -0.3
SLC28A1-201ENST00000286749 GIPC3Q8TF64 312 aa13.15□□□□□ -0.3
SLC28A1-201ENST00000286749 FATE1Q969F0 183 aa13.15□□□□□ -0.3
SLC28A1-201ENST00000286749 IGSF8Q969P0 613 aa13.15□□□□□ -0.3
SLC28A1-201ENST00000286749 SLC39A13Q96H72 371 aa13.15□□□□□ -0.3
SLC28A1-201ENST00000286749 RNF145Q96MT1 663 aa13.15□□□□□ -0.3
SLC28A1-201ENST00000286749 NANOGQ9H9S0 305 aa13.15□□□□□ -0.3
SLC28A1-201ENST00000286749 IFT80Q9P2H3 777 aaPredicted RBP13.15□□□□□ -0.3
SLC28A1-201ENST00000286749 MUSKO15146 869 aa13.14□□□□□ -0.31
SLC28A1-201ENST00000286749 SLC22A3O75751 556 aa13.14□□□□□ -0.31
SLC28A1-201ENST00000286749 FMO4P31512 558 aa13.14□□□□□ -0.31
SLC28A1-201ENST00000286749 POLR2JP52435 117 aaKnown RBP13.14□□□□□ -0.31
SLC28A1-201ENST00000286749 ADARB1P78563 741 aaKnown RBP13.14□□□□□ -0.31
SLC28A1-201ENST00000286749 POLD3Q15054 466 aaPredicted RBP13.14□□□□□ -0.31
SLC28A1-201ENST00000286749 CCL14Q16627 93 aa13.14□□□□□ -0.31
SLC28A1-201ENST00000286749 ZIK1Q3SY52 487 aaPredicted RBP13.14□□□□□ -0.31
SLC28A1-201ENST00000286749 OTUD3Q5T2D3 398 aaPredicted RBP13.14□□□□□ -0.31
SLC28A1-201ENST00000286749 SYVN1Q86TM6 617 aa13.14□□□□□ -0.31
SLC28A1-201ENST00000286749 TRIM74Q86UV6 250 aa13.14□□□□□ -0.31
SLC28A1-201ENST00000286749 TRIM73Q86UV7 250 aa13.14□□□□□ -0.31
SLC28A1-201ENST00000286749 COLGALT2Q8IYK4 626 aa13.14□□□□□ -0.31
SLC28A1-201ENST00000286749 TMEM199Q8N511 208 aa13.14□□□□□ -0.31
SLC28A1-201ENST00000286749 OR2T11Q8NH01 316 aa13.14□□□□□ -0.31
SLC28A1-201ENST00000286749 TSPEARQ8WU66 669 aa13.14□□□□□ -0.31
SLC28A1-201ENST00000286749 ACOX2Q99424 681 aa13.14□□□□□ -0.31
SLC28A1-201ENST00000286749 TBC1D23Q9NUY8 699 aa13.14□□□□□ -0.31
SLC28A1-201ENST00000286749 TBCCD1Q9NVR7 557 aa13.14□□□□□ -0.31
SLC28A1-201ENST00000286749 ABI2Q9NYB9 513 aaPredicted RBP13.14□□□□□ -0.31
SLC28A1-201ENST00000286749 LEF1Q9UJU2 399 aaPredicted RBP13.14□□□□□ -0.31
SLC28A1-201ENST00000286749 NPEPPSL1A6NEC2 478 aa13.14□□□□□ -0.31
SLC28A1-201ENST00000286749 ENPP3O14638 875 aa13.14□□□□□ -0.31
SLC28A1-201ENST00000286749 B4GAT1O43505 415 aa13.14□□□□□ -0.31
SLC28A1-201ENST00000286749 CHRNA1P02708 482 aa13.14□□□□□ -0.31
SLC28A1-201ENST00000286749 RPS17P08708 135 aaKnown RBP13.14□□□□□ -0.31
SLC28A1-201ENST00000286749 UMPSP11172 480 aa13.14□□□□□ -0.31
SLC28A1-201ENST00000286749 ELK4P28324 431 aa13.14□□□□□ -0.31
SLC28A1-201ENST00000286749 POLR2IP36954 125 aaKnown RBP13.14□□□□□ -0.31
SLC28A1-201ENST00000286749 EEFSECP57772 596 aaKnown RBP13.14□□□□□ -0.31
SLC28A1-201ENST00000286749 OR4D2P58180 307 aa13.14□□□□□ -0.31
SLC28A1-201ENST00000286749 NAA20P61599 178 aa13.14□□□□□ -0.31
SLC28A1-201ENST00000286749 PURAQ00577 322 aaKnown RBP13.14□□□□□ -0.31
SLC28A1-201ENST00000286749 YWHAHQ04917 246 aaPredicted RBP13.14□□□□□ -0.31
SLC28A1-201ENST00000286749 EFEMP1Q12805 493 aa13.14□□□□□ -0.31
SLC28A1-201ENST00000286749 BNIP3Q12983 259 aa13.14□□□□□ -0.31
SLC28A1-201ENST00000286749 FAM110CQ1W6H9 321 aa13.14□□□□□ -0.31
SLC28A1-201ENST00000286749 AASDHQ4L235 1098 aaPredicted RBP13.14□□□□□ -0.31
SLC28A1-201ENST00000286749 SETMARQ53H47 684 aaPredicted RBP13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms