RNA–Protein interactions for RNA: ENST00000286428.5

VBP1-201, Transcript of VHL binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VBP1, Length 1,686 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1-201ENST00000286428 HEPACAM2A8MVW5 462 aa18.8■□□□□ 0.6
VBP1-201ENST00000286428 CAPN14A8MX76 684 aa18.8■□□□□ 0.6
VBP1-201ENST00000286428 TULP3O75386 442 aa18.8■□□□□ 0.6
VBP1-201ENST00000286428 SUPT7LO94864 414 aa18.8■□□□□ 0.6
VBP1-201ENST00000286428 CHRM1P11229 460 aaPredicted RBP18.8■□□□□ 0.6
VBP1-201ENST00000286428 GFAPP14136 432 aa18.8■□□□□ 0.6
VBP1-201ENST00000286428 ADSLP30566 484 aaPredicted RBP18.8■□□□□ 0.6
VBP1-201ENST00000286428 PTSQ03393 145 aa18.8■□□□□ 0.6
VBP1-201ENST00000286428 PTPRRQ15256 657 aa18.8■□□□□ 0.6
VBP1-201ENST00000286428 ZNF805Q5CZA5 627 aa18.8■□□□□ 0.6
VBP1-201ENST00000286428 FRMD7Q6ZUT3 714 aa18.8■□□□□ 0.6
VBP1-201ENST00000286428 GET4Q7L5D6 327 aaPredicted RBP18.8■□□□□ 0.6
VBP1-201ENST00000286428 ZSWIM9Q86XI8 627 aa18.8■□□□□ 0.6
VBP1-201ENST00000286428 GDPD5Q8WTR4 605 aa18.8■□□□□ 0.6
VBP1-201ENST00000286428 UCMAQ8WVF2 138 aa18.8■□□□□ 0.6
VBP1-201ENST00000286428 PTERQ96BW5 349 aa18.8■□□□□ 0.6
VBP1-201ENST00000286428 CMTM5Q96DZ9 223 aa18.8■□□□□ 0.6
VBP1-201ENST00000286428 LRRC3BQ96PB8 259 aa18.8■□□□□ 0.6
VBP1-201ENST00000286428 ATOH8Q96SQ7 321 aa18.8■□□□□ 0.6
VBP1-201ENST00000286428 BTBD10Q9BSF8 475 aa18.8■□□□□ 0.6
VBP1-201ENST00000286428 CYP4F12Q9HCS2 524 aa18.8■□□□□ 0.6
VBP1-201ENST00000286428 ZDHHC2Q9UIJ5 367 aa18.8■□□□□ 0.6
VBP1-201ENST00000286428 SPECC1L-ADORA2AF8WAN1 911 aa18.79■□□□□ 0.6
VBP1-201ENST00000286428 STX16-NPEPL1H3BU86 382 aa18.79■□□□□ 0.6
VBP1-201ENST00000286428 STX16O14662 325 aa18.79■□□□□ 0.6
VBP1-201ENST00000286428 SLC22A2O15244 555 aa18.79■□□□□ 0.6
VBP1-201ENST00000286428 LEFTY1O75610 366 aa18.79■□□□□ 0.6
VBP1-201ENST00000286428 PRNPP04156 253 aa18.79■□□□□ 0.6
VBP1-201ENST00000286428 EZRP15311 586 aaKnown RBP18.79■□□□□ 0.6
VBP1-201ENST00000286428 DGKAP23743 735 aa18.79■□□□□ 0.6
VBP1-201ENST00000286428 MPSTP25325 297 aa18.79■□□□□ 0.6
VBP1-201ENST00000286428 VIPR1P32241 457 aa18.79■□□□□ 0.6
VBP1-201ENST00000286428 SATB1Q01826 763 aa18.79■□□□□ 0.6
VBP1-201ENST00000286428 TUBB3Q13509 450 aa18.79■□□□□ 0.6
VBP1-201ENST00000286428 ZRSR2Q15696 482 aaKnown RBP18.79■□□□□ 0.6
VBP1-201ENST00000286428 CHRNA6Q15825 494 aa18.79■□□□□ 0.6
VBP1-201ENST00000286428 TTLL9Q3SXZ7 439 aa18.79■□□□□ 0.6
VBP1-201ENST00000286428 SH2D4BQ5SQS7 431 aa18.79■□□□□ 0.6
VBP1-201ENST00000286428 TRIM68Q6AZZ1 485 aa18.79■□□□□ 0.6
VBP1-201ENST00000286428 MACC1Q6ZN28 852 aa18.79■□□□□ 0.6
VBP1-201ENST00000286428 ETFBKMTQ8IXQ9 262 aa18.79■□□□□ 0.6
VBP1-201ENST00000286428 LSMEM2Q8N112 164 aa18.79■□□□□ 0.6
VBP1-201ENST00000286428 NXPE1Q8N323 547 aa18.79■□□□□ 0.6
VBP1-201ENST00000286428 FBXO39Q8N4B4 442 aa18.79■□□□□ 0.6
VBP1-201ENST00000286428 CPA6Q8N4T0 437 aa18.79■□□□□ 0.6
VBP1-201ENST00000286428 CHST14Q8NCH0 376 aa18.79■□□□□ 0.6
VBP1-201ENST00000286428 CD200R1Q8TD46 325 aa18.79■□□□□ 0.6
VBP1-201ENST00000286428 CYB5D2Q8WUJ1 264 aa18.79■□□□□ 0.6
VBP1-201ENST00000286428 PTCD3Q96EY7 689 aaKnown RBP18.79■□□□□ 0.6
VBP1-201ENST00000286428 FAM83CQ9BQN1 747 aa18.79■□□□□ 0.6
VBP1-201ENST00000286428 MMADHCQ9H3L0 296 aaPredicted RBP18.79■□□□□ 0.6
VBP1-201ENST00000286428 IGFLR1Q9H665 355 aa18.79■□□□□ 0.6
VBP1-201ENST00000286428 ZDHHC3Q9NYG2 299 aa18.79■□□□□ 0.6
VBP1-201ENST00000286428 GTSE1Q9NYZ3 720 aa18.79■□□□□ 0.6
VBP1-201ENST00000286428 CDH7Q9ULB5 785 aa18.79■□□□□ 0.6
VBP1-201ENST00000286428 NOTCH4Q99466 2003 aa18.79■□□□□ 0.6
VBP1-201ENST00000286428 TTC34A8MYJ7 566 aa18.79■□□□□ 0.6
VBP1-201ENST00000286428 GAPDHSO14556 408 aaPredicted RBP18.79■□□□□ 0.6
VBP1-201ENST00000286428 GYG2O15488 501 aa18.79■□□□□ 0.6
VBP1-201ENST00000286428 MAGEC1O60732 1142 aa18.79■□□□□ 0.6
VBP1-201ENST00000286428 SNX2O60749 519 aa18.79■□□□□ 0.6
VBP1-201ENST00000286428 NIPSNAP2O75323 286 aa18.79■□□□□ 0.6
VBP1-201ENST00000286428 SPINT3P49223 89 aa18.79■□□□□ 0.6
VBP1-201ENST00000286428 CLCN7P51798 805 aa18.79■□□□□ 0.6
VBP1-201ENST00000286428 TTC31Q49AM3 519 aaPredicted RBP18.79■□□□□ 0.6
VBP1-201ENST00000286428 ARSIQ5FYB1 569 aa18.79■□□□□ 0.6
VBP1-201ENST00000286428 ATAT1Q5SQI0 421 aa18.79■□□□□ 0.6
VBP1-201ENST00000286428 ERAP2Q6P179 960 aa18.79■□□□□ 0.6
VBP1-201ENST00000286428 CYB5D1Q6P9G0 228 aa18.79■□□□□ 0.6
VBP1-201ENST00000286428 ATG14Q6ZNE5 492 aa18.79■□□□□ 0.6
VBP1-201ENST00000286428 MAVSQ7Z434 540 aa18.79■□□□□ 0.6
VBP1-201ENST00000286428 TMPRSS6Q8IU80 811 aa18.79■□□□□ 0.6
VBP1-201ENST00000286428 YAF2Q8IY57 180 aa18.79■□□□□ 0.6
VBP1-201ENST00000286428 SIDT2Q8NBJ9 832 aaKnown RBP18.79■□□□□ 0.6
VBP1-201ENST00000286428 SLC7A6OSQ96CW6 309 aaPredicted RBP18.79■□□□□ 0.6
VBP1-201ENST00000286428 COPS8Q99627 209 aa18.79■□□□□ 0.6
VBP1-201ENST00000286428 EBF3Q9H4W6 596 aa18.79■□□□□ 0.6
VBP1-201ENST00000286428 NSUN3Q9H649 340 aaKnown RBP18.79■□□□□ 0.6
VBP1-201ENST00000286428 KLC4Q9NSK0 619 aa18.79■□□□□ 0.6
VBP1-201ENST00000286428 ARL8BQ9NVJ2 186 aa18.79■□□□□ 0.6
VBP1-201ENST00000286428 B4GALT6Q9UBX8 382 aa18.79■□□□□ 0.6
VBP1-201ENST00000286428 WASF2Q9Y6W5 498 aa18.79■□□□□ 0.6
VBP1-201ENST00000286428 ANKRD36A6QL64 1941 aa18.79■□□□□ 0.6
VBP1-201ENST00000286428 NEMP2A6NFY4 417 aa18.78■□□□□ 0.6
VBP1-201ENST00000286428 UPK3BL1B0FP48 263 aa18.78■□□□□ 0.6
VBP1-201ENST00000286428 SUPT3HB4E1H0 165 aa18.78■□□□□ 0.6
VBP1-201ENST00000286428 UPK3BL2E5RIL1 263 aa18.78■□□□□ 0.6
VBP1-201ENST00000286428 BTN3A1O00481 513 aa18.78■□□□□ 0.6
VBP1-201ENST00000286428 SUPT3HO75486 399 aa18.78■□□□□ 0.6
VBP1-201ENST00000286428 NCF2P19878 526 aaPredicted RBP18.78■□□□□ 0.6
VBP1-201ENST00000286428 SP100P23497 879 aaPredicted RBP18.78■□□□□ 0.6
VBP1-201ENST00000286428 PRDX6P30041 224 aa18.78■□□□□ 0.6
VBP1-201ENST00000286428 DCDC1P59894 354 aa18.78■□□□□ 0.6
VBP1-201ENST00000286428 KCNJ2P63252 427 aa18.78■□□□□ 0.6
VBP1-201ENST00000286428 ELF3P78545 371 aaPredicted RBP18.78■□□□□ 0.6
VBP1-201ENST00000286428 SETMARQ53H47 684 aaPredicted RBP18.78■□□□□ 0.6
VBP1-201ENST00000286428 ADAMTSL2Q86TH1 951 aa18.78■□□□□ 0.6
VBP1-201ENST00000286428 TTC7BQ86TV6 843 aa18.78■□□□□ 0.6
VBP1-201ENST00000286428 TSPAN33Q86UF1 283 aa18.78■□□□□ 0.6
VBP1-201ENST00000286428 CUZD1Q86UP6 607 aa18.78■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms