RNA–Protein interactions for RNA: ENST00000279247.10

CAPN1-201, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,007 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-201ENST00000279247 HERVK_113P63132 956 aa17.82■□□□□ 0.44
CAPN1-201ENST00000279247 TBL3Q12788 808 aaKnown RBP17.82■□□□□ 0.44
CAPN1-201ENST00000279247 C6orf163Q5TEZ5 329 aa17.82■□□□□ 0.44
CAPN1-201ENST00000279247 RAB44Q7Z6P3 723 aaPredicted RBP17.82■□□□□ 0.44
CAPN1-201ENST00000279247 SERPINA9Q86WD7 417 aa17.82■□□□□ 0.44
CAPN1-201ENST00000279247 FIBINQ8TAL6 211 aa17.82■□□□□ 0.44
CAPN1-201ENST00000279247 RAD9AQ99638 391 aa17.82■□□□□ 0.44
CAPN1-201ENST00000279247 NPAS2Q99743 824 aa17.82■□□□□ 0.44
CAPN1-201ENST00000279247 ERVK-6Q9BXR3 956 aa17.82■□□□□ 0.44
CAPN1-201ENST00000279247 ATP13A3Q9H7F0 1226 aa17.82■□□□□ 0.44
CAPN1-201ENST00000279247 TDP1Q9NUW8 608 aa17.82■□□□□ 0.44
CAPN1-201ENST00000279247 CD84Q9UIB8 345 aa17.82■□□□□ 0.44
CAPN1-201ENST00000279247 NPIPB15A6NHN6 443 aaPredicted RBP17.82■□□□□ 0.44
CAPN1-201ENST00000279247 CLASP2O75122 1294 aaKnown RBP17.82■□□□□ 0.44
CAPN1-201ENST00000279247 ZNF821O75541 412 aaPredicted RBP17.82■□□□□ 0.44
CAPN1-201ENST00000279247 CRCPO75575 148 aa17.82■□□□□ 0.44
CAPN1-201ENST00000279247 ATP5BP06576 529 aaKnown RBP17.82■□□□□ 0.44
CAPN1-201ENST00000279247 HMGCLP35914 325 aa17.82■□□□□ 0.44
CAPN1-201ENST00000279247 PTDSS1P48651 473 aaKnown RBP17.82■□□□□ 0.44
CAPN1-201ENST00000279247 PKNOX1P55347 436 aa17.82■□□□□ 0.44
CAPN1-201ENST00000279247 LY6G5CQ5SRR4 150 aa17.82■□□□□ 0.44
CAPN1-201ENST00000279247 TRIM68Q6AZZ1 485 aa17.82■□□□□ 0.44
CAPN1-201ENST00000279247 OR2AP1Q8NGE2 309 aa17.82■□□□□ 0.44
CAPN1-201ENST00000279247 CLP1Q92989 425 aaKnown RBP17.82■□□□□ 0.44
CAPN1-201ENST00000279247 ATOH8Q96SQ7 321 aa17.82■□□□□ 0.44
CAPN1-201ENST00000279247 APOL5Q9BWW9 433 aa17.82■□□□□ 0.44
CAPN1-201ENST00000279247 ARHGAP26Q9UNA1 814 aa17.82■□□□□ 0.44
CAPN1-201ENST00000279247 STX16-NPEPL1H3BU86 382 aa17.81■□□□□ 0.44
CAPN1-201ENST00000279247 GUCA1CO95843 209 aa17.81■□□□□ 0.44
CAPN1-201ENST00000279247 TCN1P20061 433 aaPredicted RBP17.81■□□□□ 0.44
CAPN1-201ENST00000279247 CLCN4P51793 760 aa17.81■□□□□ 0.44
CAPN1-201ENST00000279247 XIAPP98170 497 aa17.81■□□□□ 0.44
CAPN1-201ENST00000279247 C18orf21Q32NC0 220 aaPredicted RBP17.81■□□□□ 0.44
CAPN1-201ENST00000279247 DPY19L3Q6ZPD9 716 aa17.81■□□□□ 0.44
CAPN1-201ENST00000279247 CHST14Q8NCH0 376 aa17.81■□□□□ 0.44
CAPN1-201ENST00000279247 OR9I1Q8NGQ6 314 aa17.81■□□□□ 0.44
CAPN1-201ENST00000279247 STAG3L4Q8TBR4 150 aa17.81■□□□□ 0.44
CAPN1-201ENST00000279247 SPPL3Q8TCT6 385 aa17.81■□□□□ 0.44
CAPN1-201ENST00000279247 C3orf30Q96M34 536 aa17.81■□□□□ 0.44
CAPN1-201ENST00000279247 CIPCQ9C0C6 399 aa17.81■□□□□ 0.44
CAPN1-201ENST00000279247 CD274Q9NZQ7 290 aa17.81■□□□□ 0.44
CAPN1-201ENST00000279247 FAM8A1Q9UBU6 413 aa17.81■□□□□ 0.44
CAPN1-201ENST00000279247 CRLS1Q9UJA2 301 aa17.81■□□□□ 0.44
CAPN1-201ENST00000279247 A0A0J9YYE9 177 aa17.81■□□□□ 0.44
CAPN1-201ENST00000279247 TRPC5OSA6NMA1 111 aa17.81■□□□□ 0.44
CAPN1-201ENST00000279247 SLCO1B7G3V0H7 640 aa17.81■□□□□ 0.44
CAPN1-201ENST00000279247 PSMG1O95456 288 aa17.81■□□□□ 0.44
CAPN1-201ENST00000279247 TRBC1P01850 177 aa17.81■□□□□ 0.44
CAPN1-201ENST00000279247 TYRP14679 529 aa17.81■□□□□ 0.44
CAPN1-201ENST00000279247 PRDX3P30048 256 aaKnown RBP17.81■□□□□ 0.44
CAPN1-201ENST00000279247 CYLC2Q14093 348 aaPredicted RBP17.81■□□□□ 0.44
CAPN1-201ENST00000279247 LAYNQ6UX15 382 aa17.81■□□□□ 0.44
CAPN1-201ENST00000279247 CEP70Q8NHQ1 597 aa17.81■□□□□ 0.44
CAPN1-201ENST00000279247 PYDC1Q8WXC3 89 aa17.81■□□□□ 0.44
CAPN1-201ENST00000279247 DCLRE1BQ9H816 532 aa17.81■□□□□ 0.44
CAPN1-201ENST00000279247 IL26Q9NPH9 171 aa17.81■□□□□ 0.44
CAPN1-201ENST00000279247 HACD3Q9P035 362 aa17.81■□□□□ 0.44
CAPN1-201ENST00000279247 PFDN6O15212 129 aa17.8■□□□□ 0.44
CAPN1-201ENST00000279247 TBX10O75333 385 aa17.8■□□□□ 0.44
CAPN1-201ENST00000279247 CDK14O94921 469 aa17.8■□□□□ 0.44
CAPN1-201ENST00000279247 SERPINA4P29622 427 aa17.8■□□□□ 0.44
CAPN1-201ENST00000279247 CCNHP51946 323 aaPredicted RBP17.8■□□□□ 0.44
CAPN1-201ENST00000279247 GTF2A1P52655 376 aaPredicted RBP17.8■□□□□ 0.44
CAPN1-201ENST00000279247 IL2P60568 153 aa17.8■□□□□ 0.44
CAPN1-201ENST00000279247 AFAP1L2Q8N4X5 818 aa17.8■□□□□ 0.44
CAPN1-201ENST00000279247 CD200R1Q8TD46 325 aa17.8■□□□□ 0.44
CAPN1-201ENST00000279247 HBEGFQ99075 208 aa17.8■□□□□ 0.44
CAPN1-201ENST00000279247 ASB1Q9Y576 335 aa17.8■□□□□ 0.44
CAPN1-201ENST00000279247 DENND4CQ5VZ89 1909 aa17.8■□□□□ 0.44
CAPN1-201ENST00000279247 MAGEC1O60732 1142 aa17.8■□□□□ 0.44
CAPN1-201ENST00000279247 WFS1O76024 890 aa17.8■□□□□ 0.44
CAPN1-201ENST00000279247 PTPN2P17706 415 aa17.8■□□□□ 0.44
CAPN1-201ENST00000279247 PBX2P40425 430 aa17.8■□□□□ 0.44
CAPN1-201ENST00000279247 CHRNA6Q15825 494 aa17.8■□□□□ 0.44
CAPN1-201ENST00000279247 METTL21CQ5VZV1 264 aa17.8■□□□□ 0.44
CAPN1-201ENST00000279247 LKAAEAR1Q8TD35 194 aa17.8■□□□□ 0.44
CAPN1-201ENST00000279247 SLC26A7Q8TE54 656 aa17.8■□□□□ 0.44
CAPN1-201ENST00000279247 FUBP1Q96AE4 644 aaKnown RBP17.8■□□□□ 0.44
CAPN1-201ENST00000279247 CDK15Q96Q40 435 aa17.8■□□□□ 0.44
CAPN1-201ENST00000279247 CLPBQ9H078 707 aa17.8■□□□□ 0.44
CAPN1-201ENST00000279247 MAGEE1Q9HCI5 957 aa17.8■□□□□ 0.44
CAPN1-201ENST00000279247 RIMKLBQ9ULI2 386 aa17.8■□□□□ 0.44
CAPN1-201ENST00000279247 C15orf41Q9Y2V0 281 aa17.8■□□□□ 0.44
CAPN1-201ENST00000279247 PRSS21Q9Y6M0 314 aa17.8■□□□□ 0.44
CAPN1-201ENST00000279247 CA3P07451 260 aa17.8■□□□□ 0.44
CAPN1-201ENST00000279247 LINC00032P0C843 101 aa17.8■□□□□ 0.44
CAPN1-201ENST00000279247 BPIP17213 487 aa17.8■□□□□ 0.44
CAPN1-201ENST00000279247 PREPLQ4J6C6 727 aaPredicted RBP17.8■□□□□ 0.44
CAPN1-201ENST00000279247 CPXM2Q8N436 756 aa17.8■□□□□ 0.44
CAPN1-201ENST00000279247 MAGEC3Q8TD91 643 aa17.8■□□□□ 0.44
CAPN1-201ENST00000279247 KIAA1191Q96A73 305 aa17.8■□□□□ 0.44
CAPN1-201ENST00000279247 TCF12Q99081 682 aa17.8■□□□□ 0.44
CAPN1-201ENST00000279247 CDH22Q9UJ99 828 aa17.8■□□□□ 0.44
CAPN1-201ENST00000279247 PRMT5O14744 637 aaPredicted RBP17.79■□□□□ 0.44
CAPN1-201ENST00000279247 SNX2O60749 519 aa17.79■□□□□ 0.44
CAPN1-201ENST00000279247 MOSPD3O75425 235 aa17.79■□□□□ 0.44
CAPN1-201ENST00000279247 SNRPD1P62314 119 aaKnown RBP17.79■□□□□ 0.44
CAPN1-201ENST00000279247 CACNG1Q06432 222 aa17.79■□□□□ 0.44
CAPN1-201ENST00000279247 AGKQ53H12 422 aa17.79■□□□□ 0.44
CAPN1-201ENST00000279247 LRRC66Q68CR7 880 aa17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms