RNA–Protein interactions for RNA: ENST00000274938.7

SCUBE3-201, Transcript of signal peptide, CUB domain and EGF like domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCUBE3, Length 7,356 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3-201ENST00000274938 TLL2Q9Y6L7 1015 aa8.66□□□□□ -1.02
SCUBE3-201ENST00000274938 OR2AT4A6NND4 320 aa8.66□□□□□ -1.02
SCUBE3-201ENST00000274938 PITPNM1O00562 1244 aa8.66□□□□□ -1.02
SCUBE3-201ENST00000274938 PRAMEF1O95521 474 aa8.66□□□□□ -1.02
SCUBE3-201ENST00000274938 ACADVLP49748 655 aa8.66□□□□□ -1.02
SCUBE3-201ENST00000274938 CREMQ03060 361 aa8.66□□□□□ -1.02
SCUBE3-201ENST00000274938 RBM48Q5RL73 367 aaKnown RBP8.66□□□□□ -1.02
SCUBE3-201ENST00000274938 SCIMPQ6UWF3 145 aa8.66□□□□□ -1.02
SCUBE3-201ENST00000274938 GALNT5Q7Z7M9 940 aa8.66□□□□□ -1.02
SCUBE3-201ENST00000274938 TDRPQ86YL5 185 aa8.66□□□□□ -1.02
SCUBE3-201ENST00000274938 MTMR9Q96QG7 549 aa8.66□□□□□ -1.02
SCUBE3-201ENST00000274938 CFL2Q9Y281 166 aa8.66□□□□□ -1.02
SCUBE3-201ENST00000274938 CNTNAP4Q9C0A0 1308 aa8.66□□□□□ -1.02
SCUBE3-201ENST00000274938 CHRNA5P30532 468 aa8.66□□□□□ -1.02
SCUBE3-201ENST00000274938 ARCN1P48444 511 aaKnown RBP8.66□□□□□ -1.02
SCUBE3-201ENST00000274938 CBLBQ13191 982 aa8.66□□□□□ -1.02
SCUBE3-201ENST00000274938 CNPY1Q3B7I2 92 aa8.66□□□□□ -1.02
SCUBE3-201ENST00000274938 BRMS1LQ5PSV4 323 aa8.66□□□□□ -1.02
SCUBE3-201ENST00000274938 ATXN7L2Q5T6C5 722 aaPredicted RBP8.66□□□□□ -1.02
SCUBE3-201ENST00000274938 RNASEH2BQ5TBB1 312 aaKnown RBP8.66□□□□□ -1.02
SCUBE3-201ENST00000274938 SLC30A8Q8IWU4 369 aa8.66□□□□□ -1.02
SCUBE3-201ENST00000274938 UNC5BQ8IZJ1 945 aa8.66□□□□□ -1.02
SCUBE3-201ENST00000274938 OR52K2Q8NGK3 314 aa8.66□□□□□ -1.02
SCUBE3-201ENST00000274938 TBATAQ96M53 351 aa8.66□□□□□ -1.02
SCUBE3-201ENST00000274938 RTFDC1Q9BY42 306 aaPredicted RBP8.66□□□□□ -1.02
SCUBE3-201ENST00000274938 PORCNQ9H237 461 aa8.66□□□□□ -1.02
SCUBE3-201ENST00000274938 ALG2Q9H553 416 aa8.66□□□□□ -1.02
SCUBE3-201ENST00000274938 INTS10Q9NVR2 710 aaKnown RBP8.66□□□□□ -1.02
SCUBE3-201ENST00000274938 ALG5Q9Y673 324 aa8.66□□□□□ -1.02
SCUBE3-201ENST00000274938 ATP6AP2A0A1C7CYW4 349 aa8.66□□□□□ -1.02
SCUBE3-201ENST00000274938 ATP6AP2O75787 350 aa8.66□□□□□ -1.02
SCUBE3-201ENST00000274938 PAPSS2O95340 614 aaPredicted RBP8.66□□□□□ -1.02
SCUBE3-201ENST00000274938 H6PDO95479 791 aa8.66□□□□□ -1.02
SCUBE3-201ENST00000274938 PDHA2P29803 388 aa8.66□□□□□ -1.02
SCUBE3-201ENST00000274938 MARSP56192 900 aaKnown RBP8.66□□□□□ -1.02
SCUBE3-201ENST00000274938 MVKQ03426 396 aa8.66□□□□□ -1.02
SCUBE3-201ENST00000274938 NOMO1Q15155 1222 aa8.66□□□□□ -1.02
SCUBE3-201ENST00000274938 TOMM20Q15388 145 aa8.66□□□□□ -1.02
SCUBE3-201ENST00000274938 TEAD4Q15561 434 aa8.66□□□□□ -1.02
SCUBE3-201ENST00000274938 DLG2Q15700 870 aa8.66□□□□□ -1.02
SCUBE3-201ENST00000274938 ZC3H12AQ5D1E8 599 aaKnown RBP8.66□□□□□ -1.02
SCUBE3-201ENST00000274938 ZNF311Q5JNZ3 666 aa8.66□□□□□ -1.02
SCUBE3-201ENST00000274938 ADGRD1Q6QNK2 874 aa8.66□□□□□ -1.02
SCUBE3-201ENST00000274938 C1orf186Q6ZWK4 172 aa8.66□□□□□ -1.02
SCUBE3-201ENST00000274938 C16orf59Q7L2K0 433 aa8.66□□□□□ -1.02
SCUBE3-201ENST00000274938 SRFBP1Q8NEF9 429 aaKnown RBP8.66□□□□□ -1.02
SCUBE3-201ENST00000274938 OR5K1Q8NHB7 308 aa8.66□□□□□ -1.02
SCUBE3-201ENST00000274938 SENP8Q96LD8 212 aa8.66□□□□□ -1.02
SCUBE3-201ENST00000274938 ZNF347Q96SE7 839 aa8.66□□□□□ -1.02
SCUBE3-201ENST00000274938 CNPPD1Q9BV87 410 aa8.66□□□□□ -1.02
SCUBE3-201ENST00000274938 C14orf105Q9NVL8 296 aa8.66□□□□□ -1.02
SCUBE3-201ENST00000274938 GRHL1Q9NZI5 618 aa8.66□□□□□ -1.02
SCUBE3-201ENST00000274938 SLC27A6Q9Y2P4 619 aa8.66□□□□□ -1.02
SCUBE3-201ENST00000274938 ADCY10Q96PN6 1610 aa8.66□□□□□ -1.02
SCUBE3-201ENST00000274938 A0A087X0B3 334 aa8.66□□□□□ -1.02
SCUBE3-201ENST00000274938 RBM47A0AV96 593 aaKnown RBP8.66□□□□□ -1.02
SCUBE3-201ENST00000274938 BANF1O75531 89 aa8.66□□□□□ -1.02
SCUBE3-201ENST00000274938 CLPXO76031 633 aa8.66□□□□□ -1.02
SCUBE3-201ENST00000274938 AMD1P17707 334 aa8.66□□□□□ -1.02
SCUBE3-201ENST00000274938 ERP29P30040 261 aaKnown RBP8.66□□□□□ -1.02
SCUBE3-201ENST00000274938 WEE1P30291 646 aa8.66□□□□□ -1.02
SCUBE3-201ENST00000274938 XKRXQ6PP77 449 aa8.66□□□□□ -1.02
SCUBE3-201ENST00000274938 SLC9A6Q92581 669 aa8.66□□□□□ -1.02
SCUBE3-201ENST00000274938 MECRQ9BV79 373 aa8.66□□□□□ -1.02
SCUBE3-201ENST00000274938 SOHLH2Q9NX45 425 aa8.66□□□□□ -1.02
SCUBE3-201ENST00000274938 SMPD4Q9NXE4 827 aa8.66□□□□□ -1.02
SCUBE3-201ENST00000274938 KCTD5Q9NXV2 234 aa8.66□□□□□ -1.02
SCUBE3-201ENST00000274938 PPIEQ9UNP9 301 aaKnown RBP8.66□□□□□ -1.02
SCUBE3-201ENST00000274938 CALCAP01258 141 aa8.66□□□□□ -1.02
SCUBE3-201ENST00000274938 CTSEP14091 401 aa8.66□□□□□ -1.02
SCUBE3-201ENST00000274938 BDNFP23560 247 aa8.66□□□□□ -1.02
SCUBE3-201ENST00000274938 ECHS1P30084 290 aa8.66□□□□□ -1.02
SCUBE3-201ENST00000274938 SOX10P56693 466 aa8.66□□□□□ -1.02
SCUBE3-201ENST00000274938 ADAM8P78325 824 aa8.66□□□□□ -1.02
SCUBE3-201ENST00000274938 TUBB3Q13509 450 aa8.66□□□□□ -1.02
SCUBE3-201ENST00000274938 MPP2Q14168 576 aa8.66□□□□□ -1.02
SCUBE3-201ENST00000274938 ATP13A4Q4VNC1 1196 aa8.66□□□□□ -1.02
SCUBE3-201ENST00000274938 RAET1GQ6H3X3 334 aa8.66□□□□□ -1.02
SCUBE3-201ENST00000274938 USP30Q70CQ3 517 aa8.66□□□□□ -1.02
SCUBE3-201ENST00000274938 TWIST2Q8WVJ9 160 aa8.66□□□□□ -1.02
SCUBE3-201ENST00000274938 SCGB3A2Q96PL1 93 aa8.66□□□□□ -1.02
SCUBE3-201ENST00000274938 DNAJB9Q9UBS3 223 aa8.66□□□□□ -1.02
SCUBE3-201ENST00000274938 RPL36Q9Y3U8 105 aaKnown RBP8.66□□□□□ -1.02
SCUBE3-201ENST00000274938 FPGTO14772 594 aa8.65□□□□□ -1.02
SCUBE3-201ENST00000274938 RPP40O75818 363 aaKnown RBP8.65□□□□□ -1.02
SCUBE3-201ENST00000274938 LRATO95237 230 aa8.65□□□□□ -1.02
SCUBE3-201ENST00000274938 POMCP01189 267 aa8.65□□□□□ -1.02
SCUBE3-201ENST00000274938 SLC35G4P0C7Q5 338 aa8.65□□□□□ -1.02
SCUBE3-201ENST00000274938 PRPS2P11908 318 aa8.65□□□□□ -1.02
SCUBE3-201ENST00000274938 AZGP1P25311 298 aaKnown RBP8.65□□□□□ -1.02
SCUBE3-201ENST00000274938 ACSL1P33121 698 aa8.65□□□□□ -1.02
SCUBE3-201ENST00000274938 CXCR3P49682 368 aa8.65□□□□□ -1.02
SCUBE3-201ENST00000274938 TGFB2P61812 414 aa8.65□□□□□ -1.02
SCUBE3-201ENST00000274938 SPERTQ8NA61 448 aa8.65□□□□□ -1.02
SCUBE3-201ENST00000274938 CEP76Q8TAP6 659 aa8.65□□□□□ -1.02
SCUBE3-201ENST00000274938 AIF1LQ9BQI0 150 aa8.65□□□□□ -1.02
SCUBE3-201ENST00000274938 WDR55Q9H6Y2 383 aaPredicted RBP8.65□□□□□ -1.02
SCUBE3-201ENST00000274938 ZNF490Q9ULM2 529 aaPredicted RBP8.65□□□□□ -1.02
SCUBE3-201ENST00000274938 FAM86B1E9PN63 330 aa8.65□□□□□ -1.02
SCUBE3-201ENST00000274938 C2P06681 752 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms