RNA–Protein interactions for RNA: ENST00000265896.9

SQLE-201, Transcript of squalene epoxidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SQLE, Length 2,961 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-201ENST00000265896 HCSTQ9UBK5 93 aa16.69■□□□□ 0.26
SQLE-201ENST00000265896 SARDHQ9UL12 918 aa16.69■□□□□ 0.26
SQLE-201ENST00000265896 NYNRINQ9P2P1 1898 aaKnown RBP16.69■□□□□ 0.26
SQLE-201ENST00000265896 A0A087WXM4 84 aa16.69■□□□□ 0.26
SQLE-201ENST00000265896 FFAR3O14843 346 aa16.69■□□□□ 0.26
SQLE-201ENST00000265896 GPR42O15529 346 aa16.69■□□□□ 0.26
SQLE-201ENST00000265896 CAPNS1P04632 268 aa16.69■□□□□ 0.26
SQLE-201ENST00000265896 ALDH4A1P30038 563 aa16.69■□□□□ 0.26
SQLE-201ENST00000265896 MRPS6P82932 125 aaKnown RBP16.69■□□□□ 0.26
SQLE-201ENST00000265896 TSPY1Q01534 308 aa16.69■□□□□ 0.26
SQLE-201ENST00000265896 PTPRNQ16849 979 aa16.69■□□□□ 0.26
SQLE-201ENST00000265896 C10orf120Q5SQS8 335 aa16.69■□□□□ 0.26
SQLE-201ENST00000265896 MANEALQ5VSG8 457 aa16.69■□□□□ 0.26
SQLE-201ENST00000265896 TIGD7Q6NT04 549 aaPredicted RBP16.69■□□□□ 0.26
SQLE-201ENST00000265896 CLEC4FQ8N1N0 589 aa16.69■□□□□ 0.26
SQLE-201ENST00000265896 ARRDC2Q8TBH0 407 aa16.69■□□□□ 0.26
SQLE-201ENST00000265896 FIG4Q92562 907 aa16.69■□□□□ 0.26
SQLE-201ENST00000265896 OAS3Q9Y6K5 1087 aaKnown RBP16.69■□□□□ 0.26
SQLE-201ENST00000265896 SLC12A8A0AV02 714 aa16.68■□□□□ 0.26
SQLE-201ENST00000265896 CCDC154A6NI56 674 aa16.68■□□□□ 0.26
SQLE-201ENST00000265896 PTGES3LE9PB15 166 aa16.68■□□□□ 0.26
SQLE-201ENST00000265896 AP3B1O00203 1094 aa16.68■□□□□ 0.26
SQLE-201ENST00000265896 IGLV3-25P01717 112 aa16.68■□□□□ 0.26
SQLE-201ENST00000265896 ZNF865P0CJ78 1059 aaPredicted RBP16.68■□□□□ 0.26
SQLE-201ENST00000265896 SHMT2P34897 504 aa16.68■□□□□ 0.26
SQLE-201ENST00000265896 CCT8P50990 548 aa16.68■□□□□ 0.26
SQLE-201ENST00000265896 KCNQ1P51787 676 aa16.68■□□□□ 0.26
SQLE-201ENST00000265896 ZNF235Q14590 738 aa16.68■□□□□ 0.26
SQLE-201ENST00000265896 CD300LGQ6UXG3 332 aa16.68■□□□□ 0.26
SQLE-201ENST00000265896 PIANPQ8IYJ0 282 aa16.68■□□□□ 0.26
SQLE-201ENST00000265896 RSPH1Q8WYR4 309 aa16.68■□□□□ 0.26
SQLE-201ENST00000265896 TMEM125Q96AQ2 219 aa16.68■□□□□ 0.26
SQLE-201ENST00000265896 BIRC7Q96CA5 298 aa16.68■□□□□ 0.26
SQLE-201ENST00000265896 HGH1Q9BTY7 390 aa16.68■□□□□ 0.26
SQLE-201ENST00000265896 A0A0C4DFX4 3053 aa16.68■□□□□ 0.26
SQLE-201ENST00000265896 C1orf232A0A0U1RR37 186 aa16.68■□□□□ 0.26
SQLE-201ENST00000265896 SYNCRIPO60506 623 aaKnown RBP16.68■□□□□ 0.26
SQLE-201ENST00000265896 XYLBO75191 536 aa16.68■□□□□ 0.26
SQLE-201ENST00000265896 HOXD8P13378 290 aaPredicted RBP16.68■□□□□ 0.26
SQLE-201ENST00000265896 UGT1A1P22309 533 aa16.68■□□□□ 0.26
SQLE-201ENST00000265896 UGT1A4P22310 534 aa16.68■□□□□ 0.26
SQLE-201ENST00000265896 UGT1A3P35503 534 aa16.68■□□□□ 0.26
SQLE-201ENST00000265896 UGT1A5P35504 534 aa16.68■□□□□ 0.26
SQLE-201ENST00000265896 RPS9P46781 194 aaKnown RBP16.68■□□□□ 0.26
SQLE-201ENST00000265896 BFSP2Q13515 415 aa16.68■□□□□ 0.26
SQLE-201ENST00000265896 CYBRD1Q53TN4 286 aa16.68■□□□□ 0.26
SQLE-201ENST00000265896 NANOGP8Q6NSW7 305 aa16.68■□□□□ 0.26
SQLE-201ENST00000265896 C8orf82Q6P1X6 216 aaPredicted RBP16.68■□□□□ 0.26
SQLE-201ENST00000265896 FAM171BQ6P995 826 aa16.68■□□□□ 0.26
SQLE-201ENST00000265896 OR4L1Q8NH43 312 aa16.68■□□□□ 0.26
SQLE-201ENST00000265896 CENPNQ96H22 339 aaPredicted RBP16.68■□□□□ 0.26
SQLE-201ENST00000265896 ACBD6Q9BR61 282 aa16.68■□□□□ 0.26
SQLE-201ENST00000265896 OSBPL6Q9BZF3 934 aa16.68■□□□□ 0.26
SQLE-201ENST00000265896 NANOGQ9H9S0 305 aa16.68■□□□□ 0.26
SQLE-201ENST00000265896 CATSPERZQ9NTU4 200 aa16.68■□□□□ 0.26
SQLE-201ENST00000265896 WARS2Q9UGM6 360 aaKnown RBP16.68■□□□□ 0.26
SQLE-201ENST00000265896 CORINQ9Y5Q5 1042 aa16.68■□□□□ 0.26
SQLE-201ENST00000265896 GPR182O15218 404 aa16.68■□□□□ 0.26
SQLE-201ENST00000265896 FGF10O15520 208 aaPredicted RBP16.68■□□□□ 0.26
SQLE-201ENST00000265896 RAMP2O60895 175 aa16.68■□□□□ 0.26
SQLE-201ENST00000265896 B3GALT4O96024 378 aa16.68■□□□□ 0.26
SQLE-201ENST00000265896 CYBBP04839 570 aa16.68■□□□□ 0.26
SQLE-201ENST00000265896 LINGO4Q6UY18 593 aa16.68■□□□□ 0.26
SQLE-201ENST00000265896 UTS2BQ765I0 119 aa16.68■□□□□ 0.26
SQLE-201ENST00000265896 PIWIL3Q7Z3Z3 882 aaKnown RBP16.68■□□□□ 0.26
SQLE-201ENST00000265896 GIPC2Q8TF65 315 aa16.68■□□□□ 0.26
SQLE-201ENST00000265896 EEF1AKMT1Q8WVE0 214 aa16.68■□□□□ 0.26
SQLE-201ENST00000265896 MTFMTQ96DP5 389 aaKnown RBP16.68■□□□□ 0.26
SQLE-201ENST00000265896 MYRFLQ96LU7 910 aa16.68■□□□□ 0.26
SQLE-201ENST00000265896 CCDC90BQ9GZT6 254 aa16.68■□□□□ 0.26
SQLE-201ENST00000265896 ING2Q9H160 280 aa16.68■□□□□ 0.26
SQLE-201ENST00000265896 SMOC2Q9H3U7 446 aa16.68■□□□□ 0.26
SQLE-201ENST00000265896 CNOT11Q9UKZ1 510 aaKnown RBP16.68■□□□□ 0.26
SQLE-201ENST00000265896 AXIN1O15169 862 aa16.67■□□□□ 0.26
SQLE-201ENST00000265896 GDF5P43026 501 aa16.67■□□□□ 0.26
SQLE-201ENST00000265896 OR1G1P47890 313 aa16.67■□□□□ 0.26
SQLE-201ENST00000265896 SLC36A3Q495N2 470 aa16.67■□□□□ 0.26
SQLE-201ENST00000265896 SLC44A4Q53GD3 710 aa16.67■□□□□ 0.26
SQLE-201ENST00000265896 C16orf87Q6PH81 154 aa16.67■□□□□ 0.26
SQLE-201ENST00000265896 KIAA0408Q6ZU52 694 aa16.67■□□□□ 0.26
SQLE-201ENST00000265896 BTLAQ7Z6A9 289 aa16.67■□□□□ 0.26
SQLE-201ENST00000265896 FNDC8Q8TC99 324 aa16.67■□□□□ 0.26
SQLE-201ENST00000265896 ATOH8Q96SQ7 321 aa16.67■□□□□ 0.26
SQLE-201ENST00000265896 TDRD1Q9BXT4 1180 aaKnown RBP16.67■□□□□ 0.26
SQLE-201ENST00000265896 ZYG11BQ9C0D3 744 aa16.67■□□□□ 0.26
SQLE-201ENST00000265896 CCDC68Q9H2F9 335 aa16.67■□□□□ 0.26
SQLE-201ENST00000265896 MFSD1Q9H3U5 465 aa16.67■□□□□ 0.26
SQLE-201ENST00000265896 CCSER2Q9H7U1 834 aa16.67■□□□□ 0.26
SQLE-201ENST00000265896 MRPL40Q9NQ50 206 aaKnown RBP16.67■□□□□ 0.26
SQLE-201ENST00000265896 CD274Q9NZQ7 290 aa16.67■□□□□ 0.26
SQLE-201ENST00000265896 IFT80Q9P2H3 777 aaPredicted RBP16.67■□□□□ 0.26
SQLE-201ENST00000265896 INVSQ9Y283 1065 aa16.67■□□□□ 0.26
SQLE-201ENST00000265896 FSHRP23945 695 aa16.67■□□□□ 0.26
SQLE-201ENST00000265896 PURAQ00577 322 aaKnown RBP16.67■□□□□ 0.26
SQLE-201ENST00000265896 CDC42EP1Q00587 391 aa16.67■□□□□ 0.26
SQLE-201ENST00000265896 PSAPL1Q6NUJ1 521 aa16.67■□□□□ 0.26
SQLE-201ENST00000265896 BLOC1S3Q6QNY0 202 aa16.67■□□□□ 0.26
SQLE-201ENST00000265896 TRPV3Q8NET8 790 aa16.67■□□□□ 0.26
SQLE-201ENST00000265896 OR6K2Q8NGY2 324 aa16.67■□□□□ 0.26
SQLE-201ENST00000265896 ZFP14Q9HCL3 533 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 104.4 ms