RNA–Protein interactions for RNA: ENST00000262539.7

PTPN3-201, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

TSL 5 BASIC

Gene PTPN3, Length 6,832 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-201ENST00000262539 ARMC7Q9H6L4 198 aa8.18□□□□□ -1.1
PTPN3-201ENST00000262539 TRPC4Q9UBN4 977 aa8.18□□□□□ -1.1
PTPN3-201ENST00000262539 OAS1P00973 400 aaKnown RBP8.18□□□□□ -1.1
PTPN3-201ENST00000262539 PABPC1P11940 636 aaKnown RBP8.18□□□□□ -1.1
PTPN3-201ENST00000262539 PLIN5Q00G26 463 aa8.18□□□□□ -1.1
PTPN3-201ENST00000262539 FOXM1Q08050 763 aa8.18□□□□□ -1.1
PTPN3-201ENST00000262539 CSHL1Q14406 222 aa8.18□□□□□ -1.1
PTPN3-201ENST00000262539 MSS51Q4VC12 460 aa8.18□□□□□ -1.1
PTPN3-201ENST00000262539 TRAF7Q6Q0C0 670 aa8.18□□□□□ -1.1
PTPN3-201ENST00000262539 ADCK1Q86TW2 530 aa8.18□□□□□ -1.1
PTPN3-201ENST00000262539 PLD3Q8IV08 490 aa8.18□□□□□ -1.1
PTPN3-201ENST00000262539 DENND1CQ8IV53 801 aa8.18□□□□□ -1.1
PTPN3-201ENST00000262539 DSELQ8IZU8 1212 aa8.18□□□□□ -1.1
PTPN3-201ENST00000262539 CXorf40AQ8TE69 158 aa8.18□□□□□ -1.1
PTPN3-201ENST00000262539 KIAA1191Q96A73 305 aa8.18□□□□□ -1.1
PTPN3-201ENST00000262539 HMCESQ96FZ2 354 aa8.18□□□□□ -1.1
PTPN3-201ENST00000262539 PRRG4Q9BZD6 226 aa8.18□□□□□ -1.1
PTPN3-201ENST00000262539 TMLHEQ9NVH6 421 aa8.18□□□□□ -1.1
PTPN3-201ENST00000262539 TK2O00142 265 aa8.18□□□□□ -1.1
PTPN3-201ENST00000262539 BMP10O95393 424 aa8.18□□□□□ -1.1
PTPN3-201ENST00000262539 ITGB6P18564 788 aa8.18□□□□□ -1.1
PTPN3-201ENST00000262539 AOC1P19801 751 aa8.18□□□□□ -1.1
PTPN3-201ENST00000262539 KELP23276 732 aa8.18□□□□□ -1.1
PTPN3-201ENST00000262539 CCR4P51679 360 aa8.18□□□□□ -1.1
PTPN3-201ENST00000262539 POLE2P56282 527 aa8.18□□□□□ -1.1
PTPN3-201ENST00000262539 MRPS35P82673 323 aaKnown RBP8.18□□□□□ -1.1
PTPN3-201ENST00000262539 FUT11Q495W5 492 aa8.18□□□□□ -1.1
PTPN3-201ENST00000262539 GALNTL6Q49A17 601 aa8.18□□□□□ -1.1
PTPN3-201ENST00000262539 CERCAMQ5T4B2 595 aa8.18□□□□□ -1.1
PTPN3-201ENST00000262539 HECTD2Q5U5R9 776 aa8.18□□□□□ -1.1
PTPN3-201ENST00000262539 TRMT10BQ6PF06 316 aaKnown RBP8.18□□□□□ -1.1
PTPN3-201ENST00000262539 KLHL24Q6TFL4 600 aa8.18□□□□□ -1.1
PTPN3-201ENST00000262539 CD300LGQ6UXG3 332 aa8.18□□□□□ -1.1
PTPN3-201ENST00000262539 BNC2Q6ZN30 1099 aaPredicted RBP8.18□□□□□ -1.1
PTPN3-201ENST00000262539 CYGBQ8WWM9 190 aa8.18□□□□□ -1.1
PTPN3-201ENST00000262539 FAM136AQ96C01 138 aa8.18□□□□□ -1.1
PTPN3-201ENST00000262539 QRFPRQ96P65 431 aa8.18□□□□□ -1.1
PTPN3-201ENST00000262539 ARHGEF3Q9NR81 526 aa8.18□□□□□ -1.1
PTPN3-201ENST00000262539 TREX1Q9NSU2 369 aa8.18□□□□□ -1.1
PTPN3-201ENST00000262539 DICER1Q9UPY3 1922 aaKnown RBP8.18□□□□□ -1.1
PTPN3-201ENST00000262539 PEX1O43933 1283 aa8.18□□□□□ -1.1
PTPN3-201ENST00000262539 MGRN1O60291 552 aa8.18□□□□□ -1.1
PTPN3-201ENST00000262539 CYP20A1Q6UW02 462 aa8.18□□□□□ -1.1
PTPN3-201ENST00000262539 SPATA19Q7Z5L4 167 aa8.18□□□□□ -1.1
PTPN3-201ENST00000262539 CLIP3Q96DZ5 547 aa8.18□□□□□ -1.1
PTPN3-201ENST00000262539 PLEKHG4BQ96PX9 1271 aa8.18□□□□□ -1.1
PTPN3-201ENST00000262539 TDP1Q9NUW8 608 aa8.18□□□□□ -1.1
PTPN3-201ENST00000262539 ERVW-1Q9UQF0 538 aa8.18□□□□□ -1.1
PTPN3-201ENST00000262539 MFHAS1Q9Y4C4 1052 aa8.18□□□□□ -1.1
PTPN3-201ENST00000262539 ANKRD66B4E2M5 251 aa8.18□□□□□ -1.1
PTPN3-201ENST00000262539 AKAP10O43572 662 aa8.18□□□□□ -1.1
PTPN3-201ENST00000262539 TBL1XO60907 577 aa8.18□□□□□ -1.1
PTPN3-201ENST00000262539 IDO1P14902 403 aa8.18□□□□□ -1.1
PTPN3-201ENST00000262539 IMPDH1P20839 514 aa8.18□□□□□ -1.1
PTPN3-201ENST00000262539 CLEC14AQ86T13 490 aa8.18□□□□□ -1.1
PTPN3-201ENST00000262539 MTDHQ86UE4 582 aaKnown RBP8.18□□□□□ -1.1
PTPN3-201ENST00000262539 IFNEQ86WN2 208 aa8.18□□□□□ -1.1
PTPN3-201ENST00000262539 AHI1Q8N157 1196 aa8.18□□□□□ -1.1
PTPN3-201ENST00000262539 ICA1LQ8NDH6 482 aa8.18□□□□□ -1.1
PTPN3-201ENST00000262539 C10orf82Q8WW14 230 aa8.18□□□□□ -1.1
PTPN3-201ENST00000262539 SMG7Q92540 1137 aaKnown RBP8.18□□□□□ -1.1
PTPN3-201ENST00000262539 ROPN1LQ96C74 230 aa8.18□□□□□ -1.1
PTPN3-201ENST00000262539 LYSMD1Q96S90 227 aa8.18□□□□□ -1.1
PTPN3-201ENST00000262539 KLF16Q9BXK1 252 aaPredicted RBP8.18□□□□□ -1.1
PTPN3-201ENST00000262539 RNPEPL1Q9HAU8 725 aa8.18□□□□□ -1.1
PTPN3-201ENST00000262539 FANCEQ9HB96 536 aa8.18□□□□□ -1.1
PTPN3-201ENST00000262539 MARK1Q9P0L2 795 aa8.18□□□□□ -1.1
PTPN3-201ENST00000262539 SLC27A5Q9Y2P5 690 aa8.18□□□□□ -1.1
PTPN3-201ENST00000262539 AZIN1O14977 448 aa8.17□□□□□ -1.1
PTPN3-201ENST00000262539 PER2O15055 1255 aa8.17□□□□□ -1.1
PTPN3-201ENST00000262539 USP12O75317 370 aa8.17□□□□□ -1.1
PTPN3-201ENST00000262539 IFNA16P05015 189 aa8.17□□□□□ -1.1
PTPN3-201ENST00000262539 ZNF24P17028 368 aa8.17□□□□□ -1.1
PTPN3-201ENST00000262539 FEN1P39748 380 aaKnown RBP8.17□□□□□ -1.1
PTPN3-201ENST00000262539 MBTPS1Q14703 1052 aa8.17□□□□□ -1.1
PTPN3-201ENST00000262539 FAAH2Q6GMR7 532 aa8.17□□□□□ -1.1
PTPN3-201ENST00000262539 ZNF544Q6NX49 715 aa8.17□□□□□ -1.1
PTPN3-201ENST00000262539 NET1Q7Z628 596 aaPredicted RBP8.17□□□□□ -1.1
PTPN3-201ENST00000262539 RTN4RL1Q86UN2 441 aaPredicted RBP8.17□□□□□ -1.1
PTPN3-201ENST00000262539 C7orf61Q8IZ16 206 aa8.17□□□□□ -1.1
PTPN3-201ENST00000262539 ASZ1Q8WWH4 475 aa8.17□□□□□ -1.1
PTPN3-201ENST00000262539 TMEM159Q96B96 161 aa8.17□□□□□ -1.1
PTPN3-201ENST00000262539 HOPXQ9BPY8 73 aaPredicted RBP8.17□□□□□ -1.1
PTPN3-201ENST00000262539 CPEB1Q9BZB8 566 aaKnown RBP8.17□□□□□ -1.1
PTPN3-201ENST00000262539 OSBPL7Q9BZF2 842 aa8.17□□□□□ -1.1
PTPN3-201ENST00000262539 TMEM245Q9H330 911 aa8.17□□□□□ -1.1
PTPN3-201ENST00000262539 HAO1Q9UJM8 370 aa8.17□□□□□ -1.1
PTPN3-201ENST00000262539 MGAT4DA6NG13 374 aa8.17□□□□□ -1.1
PTPN3-201ENST00000262539 H0Y3Z8 333 aa8.17□□□□□ -1.1
PTPN3-201ENST00000262539 HNRNPRO43390 633 aaKnown RBP8.17□□□□□ -1.1
PTPN3-201ENST00000262539 HS6ST1O60243 411 aa8.17□□□□□ -1.1
PTPN3-201ENST00000262539 KERAO60938 352 aa8.17□□□□□ -1.1
PTPN3-201ENST00000262539 FGF18O76093 207 aa8.17□□□□□ -1.1
PTPN3-201ENST00000262539 C8GP07360 202 aa8.17□□□□□ -1.1
PTPN3-201ENST00000262539 SRPRAP08240 638 aaKnown RBP8.17□□□□□ -1.1
PTPN3-201ENST00000262539 VHLP40337 213 aa8.17□□□□□ -1.1
PTPN3-201ENST00000262539 PITX1P78337 314 aaPredicted RBP8.17□□□□□ -1.1
PTPN3-201ENST00000262539 ABRQ12979 859 aa8.17□□□□□ -1.1
PTPN3-201ENST00000262539 PRKG2Q13237 762 aa8.17□□□□□ -1.1
PTPN3-201ENST00000262539 ZCCHC8Q6NZY4 707 aaKnown RBP8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms