RNA–Protein interactions for RNA: ENST00000233575.6

SNX17-201, Transcript of sorting nexin 17, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX17, Length 2,044 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-201ENST00000233575 GPR78Q96P69 363 aa18.44■□□□□ 0.54
SNX17-201ENST00000233575 SLC30A3Q99726 388 aa18.44■□□□□ 0.54
SNX17-201ENST00000233575 EPN3Q9H201 632 aa18.44■□□□□ 0.54
SNX17-201ENST00000233575 RUVBL2Q9Y230 463 aaKnown RBP18.44■□□□□ 0.54
SNX17-201ENST00000233575 VPS9D1Q9Y2B5 631 aa18.44■□□□□ 0.54
SNX17-201ENST00000233575 ANKRD6Q9Y2G4 727 aa18.44■□□□□ 0.54
SNX17-201ENST00000233575 FADS3Q9Y5Q0 445 aa18.44■□□□□ 0.54
SNX17-201ENST00000233575 VCANP13611 3396 aa18.44■□□□□ 0.54
SNX17-201ENST00000233575 GMNCA6NCL1 334 aa18.44■□□□□ 0.54
SNX17-201ENST00000233575 FADS2P1A8MWK0 482 aa18.44■□□□□ 0.54
SNX17-201ENST00000233575 RNASEH1O60930 286 aaKnown RBP18.44■□□□□ 0.54
SNX17-201ENST00000233575 RHOBTB1O94844 696 aa18.44■□□□□ 0.54
SNX17-201ENST00000233575 C6P13671 934 aa18.44■□□□□ 0.54
SNX17-201ENST00000233575 CSHL1Q14406 222 aa18.44■□□□□ 0.54
SNX17-201ENST00000233575 STARD3Q14849 445 aa18.44■□□□□ 0.54
SNX17-201ENST00000233575 PDK4Q16654 411 aa18.44■□□□□ 0.54
SNX17-201ENST00000233575 HDDC3Q8N4P3 179 aa18.44■□□□□ 0.54
SNX17-201ENST00000233575 TSPAN17Q96FV3 270 aa18.44■□□□□ 0.54
SNX17-201ENST00000233575 COQ10AQ96MF6 247 aa18.44■□□□□ 0.54
SNX17-201ENST00000233575 CCDC68Q9H2F9 335 aa18.44■□□□□ 0.54
SNX17-201ENST00000233575 IGSF5Q9NSI5 407 aa18.44■□□□□ 0.54
SNX17-201ENST00000233575 CAMSAP3Q9P1Y5 1249 aaPredicted RBP18.44■□□□□ 0.54
SNX17-201ENST00000233575 H0Y858 1186 aa18.43■□□□□ 0.54
SNX17-201ENST00000233575 TK2O00142 265 aa18.43■□□□□ 0.54
SNX17-201ENST00000233575 PRMT5O14744 637 aaPredicted RBP18.43■□□□□ 0.54
SNX17-201ENST00000233575 PFDN6O15212 129 aa18.43■□□□□ 0.54
SNX17-201ENST00000233575 KLHL2O95198 593 aa18.43■□□□□ 0.54
SNX17-201ENST00000233575 GSTA1P08263 222 aa18.43■□□□□ 0.54
SNX17-201ENST00000233575 CCDC166P0CW27 439 aa18.43■□□□□ 0.54
SNX17-201ENST00000233575 GLULP15104 373 aa18.43■□□□□ 0.54
SNX17-201ENST00000233575 SUOXP51687 545 aa18.43■□□□□ 0.54
SNX17-201ENST00000233575 ADARP55265 1226 aaKnown RBP18.43■□□□□ 0.54
SNX17-201ENST00000233575 DCDC1P59894 354 aa18.43■□□□□ 0.54
SNX17-201ENST00000233575 B4GALNT1Q00973 533 aa18.43■□□□□ 0.54
SNX17-201ENST00000233575 E2F5Q15329 346 aa18.43■□□□□ 0.54
SNX17-201ENST00000233575 ZDHHC20Q5W0Z9 365 aa18.43■□□□□ 0.54
SNX17-201ENST00000233575 ZNF776Q68DI1 518 aaPredicted RBP18.43■□□□□ 0.54
SNX17-201ENST00000233575 LRRC34Q8IZ02 419 aa18.43■□□□□ 0.54
SNX17-201ENST00000233575 TMEM151AQ8N4L1 468 aa18.43■□□□□ 0.54
SNX17-201ENST00000233575 KCNV2Q8TDN2 545 aa18.43■□□□□ 0.54
SNX17-201ENST00000233575 HEXDCQ8WVB3 486 aa18.43■□□□□ 0.54
SNX17-201ENST00000233575 UBXN10Q96LJ8 280 aa18.43■□□□□ 0.54
SNX17-201ENST00000233575 GPR21Q99679 349 aa18.43■□□□□ 0.54
SNX17-201ENST00000233575 NMRAL1Q9HBL8 299 aa18.43■□□□□ 0.54
SNX17-201ENST00000233575 CPSF2Q9P2I0 782 aaKnown RBP18.43■□□□□ 0.54
SNX17-201ENST00000233575 MBD1Q9UIS9 605 aaPredicted RBP18.43■□□□□ 0.54
SNX17-201ENST00000233575 CA14Q9ULX7 337 aa18.43■□□□□ 0.54
SNX17-201ENST00000233575 DUSP12Q9UNI6 340 aa18.43■□□□□ 0.54
SNX17-201ENST00000233575 A0A087X1B8 175 aa18.42■□□□□ 0.54
SNX17-201ENST00000233575 WNT9AO14904 365 aa18.42■□□□□ 0.54
SNX17-201ENST00000233575 MTX2O75431 263 aa18.42■□□□□ 0.54
SNX17-201ENST00000233575 ADH1BP00325 375 aa18.42■□□□□ 0.54
SNX17-201ENST00000233575 SBK3P0C264 359 aa18.42■□□□□ 0.54
SNX17-201ENST00000233575 C5AR1P21730 350 aa18.42■□□□□ 0.54
SNX17-201ENST00000233575 BGNP21810 368 aa18.42■□□□□ 0.54
SNX17-201ENST00000233575 MRPS21P82921 87 aaKnown RBP18.42■□□□□ 0.54
SNX17-201ENST00000233575 TMEM92Q6UXU6 159 aa18.42■□□□□ 0.54
SNX17-201ENST00000233575 TBC1D1Q86TI0 1168 aaPredicted RBP18.42■□□□□ 0.54
SNX17-201ENST00000233575 TMPRSS6Q8IU80 811 aa18.42■□□□□ 0.54
SNX17-201ENST00000233575 RBFAQ8N0V3 343 aa18.42■□□□□ 0.54
SNX17-201ENST00000233575 GIMAP7Q8NHV1 300 aa18.42■□□□□ 0.54
SNX17-201ENST00000233575 LKAAEAR1Q8TD35 194 aa18.42■□□□□ 0.54
SNX17-201ENST00000233575 AP2M1Q96CW1 435 aa18.42■□□□□ 0.54
SNX17-201ENST00000233575 DTD2Q96FN9 168 aa18.42■□□□□ 0.54
SNX17-201ENST00000233575 CHMP6Q96FZ7 201 aa18.42■□□□□ 0.54
SNX17-201ENST00000233575 PSMD11O00231 422 aa18.42■□□□□ 0.54
SNX17-201ENST00000233575 RNASEH2AO75792 299 aaKnown RBP18.42■□□□□ 0.54
SNX17-201ENST00000233575 RECQL5O94762 991 aaPredicted RBP18.42■□□□□ 0.54
SNX17-201ENST00000233575 ESR1P03372 595 aa18.42■□□□□ 0.54
SNX17-201ENST00000233575 VIMP08670 466 aaKnown RBP18.42■□□□□ 0.54
SNX17-201ENST00000233575 ZNF37AP17032 561 aaPredicted RBP18.42■□□□□ 0.54
SNX17-201ENST00000233575 ZNF7P17097 686 aaPredicted RBP18.42■□□□□ 0.54
SNX17-201ENST00000233575 KCNA4P22459 653 aa18.42■□□□□ 0.54
SNX17-201ENST00000233575 ITGA9Q13797 1035 aa18.42■□□□□ 0.54
SNX17-201ENST00000233575 PCLAFQ15004 111 aa18.42■□□□□ 0.54
SNX17-201ENST00000233575 MLF2Q15773 248 aaPredicted RBP18.42■□□□□ 0.54
SNX17-201ENST00000233575 TMEM52BQ4KMG9 183 aa18.42■□□□□ 0.54
SNX17-201ENST00000233575 GPRC6AQ5T6X5 926 aa18.42■□□□□ 0.54
SNX17-201ENST00000233575 CES4AQ5XG92 561 aa18.42■□□□□ 0.54
SNX17-201ENST00000233575 PAQR3Q6TCH7 311 aa18.42■□□□□ 0.54
SNX17-201ENST00000233575 Q6ZS52 159 aa18.42■□□□□ 0.54
SNX17-201ENST00000233575 FSTL5Q8N475 847 aaPredicted RBP18.42■□□□□ 0.54
SNX17-201ENST00000233575 SIDT2Q8NBJ9 832 aaKnown RBP18.42■□□□□ 0.54
SNX17-201ENST00000233575 ZNF75CPQ92670 426 aaPredicted RBP18.42■□□□□ 0.54
SNX17-201ENST00000233575 CLPBQ9H078 707 aa18.42■□□□□ 0.54
SNX17-201ENST00000233575 SLCO1B3Q9NPD5 702 aa18.42■□□□□ 0.54
SNX17-201ENST00000233575 NFKBIL1Q9UBC1 381 aaPredicted RBP18.42■□□□□ 0.54
SNX17-201ENST00000233575 NUMA1Q14980 2115 aa18.41■□□□□ 0.54
SNX17-201ENST00000233575 PIKFYVEQ9Y2I7 2098 aa18.41■□□□□ 0.54
SNX17-201ENST00000233575 K7ESM1 405 aa18.41■□□□□ 0.54
SNX17-201ENST00000233575 BPGMP07738 259 aa18.41■□□□□ 0.54
SNX17-201ENST00000233575 COL6A2P12110 1019 aa18.41■□□□□ 0.54
SNX17-201ENST00000233575 ITGB6P18564 788 aa18.41■□□□□ 0.54
SNX17-201ENST00000233575 PDAP1Q13442 181 aaKnown RBP18.41■□□□□ 0.54
SNX17-201ENST00000233575 KHDC1Q4VXA5 237 aaKnown RBP18.41■□□□□ 0.54
SNX17-201ENST00000233575 ZNF648Q5T619 568 aaPredicted RBP18.41■□□□□ 0.54
SNX17-201ENST00000233575 LRRC8EQ6NSJ5 796 aa18.41■□□□□ 0.54
SNX17-201ENST00000233575 TRAM1L1Q8N609 369 aa18.41■□□□□ 0.54
SNX17-201ENST00000233575 RAB7BQ96AH8 199 aa18.41■□□□□ 0.54
SNX17-201ENST00000233575 ZDHHC3Q9NYG2 299 aa18.41■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms