RNA–Protein interactions for RNA: ENST00000641573.1

PHGDH-221, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,180 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-221ENST00000641573 NDNQ99608 321 aa13.05□□□□□ -0.32
PHGDH-221ENST00000641573 OMDQ99983 421 aa13.05□□□□□ -0.32
PHGDH-221ENST00000641573 P2RY13Q9BPV8 354 aa13.05□□□□□ -0.32
PHGDH-221ENST00000641573 FAM126AQ9BYI3 521 aaPredicted RBP13.05□□□□□ -0.32
PHGDH-221ENST00000641573 EPN3Q9H201 632 aa13.05□□□□□ -0.32
PHGDH-221ENST00000641573 FAM96AQ9H5X1 160 aa13.05□□□□□ -0.32
PHGDH-221ENST00000641573 FBRSL1Q9HCM7 1045 aaKnown RBP13.05□□□□□ -0.32
PHGDH-221ENST00000641573 PARD6AQ9NPB6 346 aa13.05□□□□□ -0.32
PHGDH-221ENST00000641573 INTS10Q9NVR2 710 aaKnown RBP13.05□□□□□ -0.32
PHGDH-221ENST00000641573 SUN2Q9UH99 717 aa13.05□□□□□ -0.32
PHGDH-221ENST00000641573 TLK1Q9UKI8 766 aa13.05□□□□□ -0.32
PHGDH-221ENST00000641573 GRID1Q9ULK0 1009 aa13.05□□□□□ -0.32
PHGDH-221ENST00000641573 ANKRD6Q9Y2G4 727 aa13.05□□□□□ -0.32
PHGDH-221ENST00000641573 SLC30A1Q9Y6M5 507 aa13.05□□□□□ -0.32
PHGDH-221ENST00000641573 C16orf96A6NNT2 1141 aa13.04□□□□□ -0.32
PHGDH-221ENST00000641573 KPNA3O00505 521 aaPredicted RBP13.04□□□□□ -0.32
PHGDH-221ENST00000641573 PHGDHO43175 533 aaKnown RBP13.04□□□□□ -0.32
PHGDH-221ENST00000641573 NDUFS3O75489 264 aa13.04□□□□□ -0.32
PHGDH-221ENST00000641573 TOP3BO95985 862 aaKnown RBP13.04□□□□□ -0.32
PHGDH-221ENST00000641573 GSTA1P08263 222 aa13.04□□□□□ -0.32
PHGDH-221ENST00000641573 C1SP09871 688 aa13.04□□□□□ -0.32
PHGDH-221ENST00000641573 DHRS4L1P0CG22 281 aa13.04□□□□□ -0.32
PHGDH-221ENST00000641573 STMN1P16949 149 aa13.04□□□□□ -0.32
PHGDH-221ENST00000641573 BPIP17213 487 aa13.04□□□□□ -0.32
PHGDH-221ENST00000641573 TGM1P22735 817 aa13.04□□□□□ -0.32
PHGDH-221ENST00000641573 LHCGRP22888 699 aa13.04□□□□□ -0.32
PHGDH-221ENST00000641573 XPAP23025 273 aaPredicted RBP13.04□□□□□ -0.32
PHGDH-221ENST00000641573 NFKBIAP25963 317 aa13.04□□□□□ -0.32
PHGDH-221ENST00000641573 CRABP2P29373 138 aa13.04□□□□□ -0.32
PHGDH-221ENST00000641573 VIPR1P32241 457 aa13.04□□□□□ -0.32
PHGDH-221ENST00000641573 GMPRP36959 345 aa13.04□□□□□ -0.32
PHGDH-221ENST00000641573 SPAM1P38567 509 aa13.04□□□□□ -0.32
PHGDH-221ENST00000641573 TNFRSF4P43489 277 aa13.04□□□□□ -0.32
PHGDH-221ENST00000641573 CDKN1CP49918 316 aaPredicted RBP13.04□□□□□ -0.32
PHGDH-221ENST00000641573 SLC12A2P55011 1212 aa13.04□□□□□ -0.32
PHGDH-221ENST00000641573 TAS2R39P59534 338 aa13.04□□□□□ -0.32
PHGDH-221ENST00000641573 RAB10P61026 200 aa13.04□□□□□ -0.32
PHGDH-221ENST00000641573 PTSQ03393 145 aa13.04□□□□□ -0.32
PHGDH-221ENST00000641573 CACNG1Q06432 222 aa13.04□□□□□ -0.32
PHGDH-221ENST00000641573 ZKSCAN8Q15776 578 aaPredicted RBP13.04□□□□□ -0.32
PHGDH-221ENST00000641573 INSCQ1MX18 579 aa13.04□□□□□ -0.32
PHGDH-221ENST00000641573 POM121L1PQ3SYA9 428 aa13.04□□□□□ -0.32
PHGDH-221ENST00000641573 SLC44A4Q53GD3 710 aa13.04□□□□□ -0.32
PHGDH-221ENST00000641573 TAF1BQ53T94 588 aaPredicted RBP13.04□□□□□ -0.32
PHGDH-221ENST00000641573 N4BP2L1Q5TBK1 243 aaPredicted RBP13.04□□□□□ -0.32
PHGDH-221ENST00000641573 PSAPL1Q6NUJ1 521 aa13.04□□□□□ -0.32
PHGDH-221ENST00000641573 C16orf46Q6P387 395 aa13.04□□□□□ -0.32
PHGDH-221ENST00000641573 TAS2R42Q7RTR8 314 aa13.04□□□□□ -0.32
PHGDH-221ENST00000641573 PIANPQ8IYJ0 282 aa13.04□□□□□ -0.32
PHGDH-221ENST00000641573 TMIEQ8NEW7 156 aa13.04□□□□□ -0.32
PHGDH-221ENST00000641573 TSPAN17Q96FV3 270 aa13.04□□□□□ -0.32
PHGDH-221ENST00000641573 FAM129BQ96TA1 746 aa13.04□□□□□ -0.32
PHGDH-221ENST00000641573 TCF12Q99081 682 aa13.04□□□□□ -0.32
PHGDH-221ENST00000641573 ACOX2Q99424 681 aa13.04□□□□□ -0.32
PHGDH-221ENST00000641573 NELL2Q99435 816 aa13.04□□□□□ -0.32
PHGDH-221ENST00000641573 RABEP2Q9H5N1 569 aa13.04□□□□□ -0.32
PHGDH-221ENST00000641573 LTB4R2Q9NPC1 389 aa13.04□□□□□ -0.32
PHGDH-221ENST00000641573 PCDH12Q9NPG4 1184 aa13.04□□□□□ -0.32
PHGDH-221ENST00000641573 ZDHHC4Q9NPG8 344 aa13.04□□□□□ -0.32
PHGDH-221ENST00000641573 CACNA2D2Q9NY47 1150 aa13.04□□□□□ -0.32
PHGDH-221ENST00000641573 PPM1HQ9ULR3 514 aa13.04□□□□□ -0.32
PHGDH-221ENST00000641573 CORO1CQ9ULV4 474 aaPredicted RBP13.04□□□□□ -0.32
PHGDH-221ENST00000641573 CRYL1Q9Y2S2 319 aa13.04□□□□□ -0.32
PHGDH-221ENST00000641573 STARD13Q9Y3M8 1113 aa13.04□□□□□ -0.32
PHGDH-221ENST00000641573 ANKRD11Q6UB99 2663 aaPredicted RBP13.03□□□□□ -0.32
PHGDH-221ENST00000641573 GLYATL1P3A0A0U1RQE8 302 aa13.03□□□□□ -0.32
PHGDH-221ENST00000641573 WDR91A4D1P6 747 aa13.03□□□□□ -0.32
PHGDH-221ENST00000641573 TCP11X1B4DZS4 312 aa13.03□□□□□ -0.32
PHGDH-221ENST00000641573 SPECC1L-ADORA2AF8WAN1 911 aa13.03□□□□□ -0.32
PHGDH-221ENST00000641573 PFDN6O15212 129 aa13.03□□□□□ -0.32
PHGDH-221ENST00000641573 SRP72O76094 671 aaKnown RBP13.03□□□□□ -0.32
PHGDH-221ENST00000641573 EPHX1P07099 455 aa13.03□□□□□ -0.32
PHGDH-221ENST00000641573 CHRM1P11229 460 aaPredicted RBP13.03□□□□□ -0.32
PHGDH-221ENST00000641573 HNRNPLP14866 589 aaKnown RBP eCLIP13.03□□□□□ -0.32
PHGDH-221ENST00000641573 SERPINB4P48594 390 aa13.03□□□□□ -0.32
PHGDH-221ENST00000641573 TTPAP49638 278 aa13.03□□□□□ -0.32
PHGDH-221ENST00000641573 PGGT1BP53609 377 aa13.03□□□□□ -0.32
PHGDH-221ENST00000641573 IRF9Q00978 393 aa13.03□□□□□ -0.32
PHGDH-221ENST00000641573 ARHGEF7Q14155 803 aa13.03□□□□□ -0.32
PHGDH-221ENST00000641573 ELAVL3Q14576 367 aaKnown RBP13.03□□□□□ -0.32
PHGDH-221ENST00000641573 E2F5Q15329 346 aa13.03□□□□□ -0.32
PHGDH-221ENST00000641573 AARS2Q5JTZ9 985 aaKnown RBP13.03□□□□□ -0.32
PHGDH-221ENST00000641573 RNF187Q5TA31 235 aaPredicted RBP13.03□□□□□ -0.32
PHGDH-221ENST00000641573 LAIR1Q6GTX8 287 aa13.03□□□□□ -0.32
PHGDH-221ENST00000641573 FAM45BPQ6NSW5 357 aa13.03□□□□□ -0.32
PHGDH-221ENST00000641573 ZNF549Q6P9A3 640 aa13.03□□□□□ -0.32
PHGDH-221ENST00000641573 TSSK4Q6SA08 328 aa13.03□□□□□ -0.32
PHGDH-221ENST00000641573 FAM151BQ6UXP7 276 aa13.03□□□□□ -0.32
PHGDH-221ENST00000641573 KYAT3Q6YP21 454 aaKnown RBP13.03□□□□□ -0.32
PHGDH-221ENST00000641573 DPPA4Q7L190 304 aa13.03□□□□□ -0.32
PHGDH-221ENST00000641573 PARS2Q7L3T8 475 aaKnown RBP13.03□□□□□ -0.32
PHGDH-221ENST00000641573 CLEC14AQ86T13 490 aa13.03□□□□□ -0.32
PHGDH-221ENST00000641573 TTC7BQ86TV6 843 aa13.03□□□□□ -0.32
PHGDH-221ENST00000641573 CEP97Q8IW35 865 aa13.03□□□□□ -0.32
PHGDH-221ENST00000641573 PLD6Q8N2A8 252 aaKnown RBP13.03□□□□□ -0.32
PHGDH-221ENST00000641573 ARMC2Q8NEN0 867 aa13.03□□□□□ -0.32
PHGDH-221ENST00000641573 PIP4K2CQ8TBX8 421 aa13.03□□□□□ -0.32
PHGDH-221ENST00000641573 FAM45AQ8TCE6 357 aa13.03□□□□□ -0.32
PHGDH-221ENST00000641573 LPGAT1Q92604 370 aa13.03□□□□□ -0.32
PHGDH-221ENST00000641573 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.03□□□□□ -0.322e-7■■■■■ 68.5
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms