RNA–Protein interactions for RNA: ENST00000638375.1

HLA-A-209, Transcript of major histocompatibility complex, class I, A, humanhuman

BASIC

Gene HLA-A, Length 975 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-A-209ENST00000638375 ZNF398Q8TD17 642 aa19.28■□□□□ 0.68
HLA-A-209ENST00000638375 IFT81Q8WYA0 676 aa19.28■□□□□ 0.68
HLA-A-209ENST00000638375 TCEAL3Q969E4 200 aa19.28■□□□□ 0.68
HLA-A-209ENST00000638375 ZNF669Q96BR6 464 aaPredicted RBP19.28■□□□□ 0.68
HLA-A-209ENST00000638375 COX14Q96I36 57 aa19.28■□□□□ 0.68
HLA-A-209ENST00000638375 FCRL3Q96P31 734 aaPredicted RBP19.28■□□□□ 0.68
HLA-A-209ENST00000638375 EBNA1BP2Q99848 306 aaKnown RBP19.28■□□□□ 0.68
HLA-A-209ENST00000638375 UGT1A7Q9HAW7 530 aa19.28■□□□□ 0.68
HLA-A-209ENST00000638375 UGT1A10Q9HAW8 530 aa19.28■□□□□ 0.68
HLA-A-209ENST00000638375 UGT1A8Q9HAW9 530 aa19.28■□□□□ 0.68
HLA-A-209ENST00000638375 NCDNQ9UBB6 729 aa19.28■□□□□ 0.68
HLA-A-209ENST00000638375 SLC6A14Q9UN76 642 aa19.28■□□□□ 0.68
HLA-A-209ENST00000638375 CHMP2BQ9UQN3 213 aa19.28■□□□□ 0.68
HLA-A-209ENST00000638375 ANKRD6Q9Y2G4 727 aa19.28■□□□□ 0.68
HLA-A-209ENST00000638375 TEX264Q9Y6I9 313 aa19.28■□□□□ 0.68
HLA-A-209ENST00000638375 GOT2P00505 430 aaKnown RBP19.27■□□□□ 0.68
HLA-A-209ENST00000638375 HOXC4P09017 264 aaPredicted RBP19.27■□□□□ 0.68
HLA-A-209ENST00000638375 PRSS56P0CW18 603 aa19.27■□□□□ 0.68
HLA-A-209ENST00000638375 MYCLP1P12525 358 aaPredicted RBP19.27■□□□□ 0.68
HLA-A-209ENST00000638375 PGAM1P18669 254 aa19.27■□□□□ 0.68
HLA-A-209ENST00000638375 ARNTP27540 789 aa19.27■□□□□ 0.68
HLA-A-209ENST00000638375 C21orf59P57076 290 aa19.27■□□□□ 0.68
HLA-A-209ENST00000638375 NFATC4Q14934 902 aa19.27■□□□□ 0.68
HLA-A-209ENST00000638375 KIF19Q2TAC6 998 aa19.27■□□□□ 0.68
HLA-A-209ENST00000638375 ANKRD20A4Q4UJ75 823 aa19.27■□□□□ 0.68
HLA-A-209ENST00000638375 CENPUQ71F23 418 aa19.27■□□□□ 0.68
HLA-A-209ENST00000638375 GLYATL1Q969I3 302 aa19.27■□□□□ 0.68
HLA-A-209ENST00000638375 LRRC39Q96DD0 335 aa19.27■□□□□ 0.68
HLA-A-209ENST00000638375 HIC2Q96JB3 615 aa19.27■□□□□ 0.68
HLA-A-209ENST00000638375 VPS35Q96QK1 796 aa19.27■□□□□ 0.68
HLA-A-209ENST00000638375 FAM129AQ9BZQ8 928 aa19.27■□□□□ 0.68
HLA-A-209ENST00000638375 FAM96AQ9H5X1 160 aa19.27■□□□□ 0.68
HLA-A-209ENST00000638375 ASB8Q9H765 288 aa19.27■□□□□ 0.68
HLA-A-209ENST00000638375 PLAC1Q9HBJ0 212 aa19.27■□□□□ 0.68
HLA-A-209ENST00000638375 PHPT1Q9NRX4 125 aaPredicted RBP19.27■□□□□ 0.68
HLA-A-209ENST00000638375 OAS3Q9Y6K5 1087 aaKnown RBP19.27■□□□□ 0.68
HLA-A-209ENST00000638375 RPS6KL1Q9Y6S9 549 aa19.27■□□□□ 0.68
HLA-A-209ENST00000638375 ZCWPW2A0A1B0GU75 182 aa19.26■□□□□ 0.67
HLA-A-209ENST00000638375 AGAP14A8MT82 685 aa19.26■□□□□ 0.67
HLA-A-209ENST00000638375 CACNB4O00305 520 aaPredicted RBP19.26■□□□□ 0.67
HLA-A-209ENST00000638375 EIF3HO15372 352 aaKnown RBP eCLIP19.26■□□□□ 0.67
HLA-A-209ENST00000638375 MAGEC1O60732 1142 aa19.26■□□□□ 0.67
HLA-A-209ENST00000638375 USP1O94782 785 aa19.26■□□□□ 0.67
HLA-A-209ENST00000638375 FOXN2P32314 431 aa19.26■□□□□ 0.67
HLA-A-209ENST00000638375 CTSKP43235 329 aa19.26■□□□□ 0.67
HLA-A-209ENST00000638375 CDKN1CP49918 316 aaPredicted RBP19.26■□□□□ 0.67
HLA-A-209ENST00000638375 THOP1P52888 689 aa19.26■□□□□ 0.67
HLA-A-209ENST00000638375 IRX4P78413 519 aa19.26■□□□□ 0.67
HLA-A-209ENST00000638375 SPEM2Q0P670 501 aa19.26■□□□□ 0.67
HLA-A-209ENST00000638375 GRIK2Q13002 908 aa19.26■□□□□ 0.67
HLA-A-209ENST00000638375 NFATC2Q13469 925 aa19.26■□□□□ 0.67
HLA-A-209ENST00000638375 CUL1Q13616 776 aa19.26■□□□□ 0.67
HLA-A-209ENST00000638375 ITGA9Q13797 1035 aa19.26■□□□□ 0.67
HLA-A-209ENST00000638375 FZD2Q14332 565 aa19.26■□□□□ 0.67
HLA-A-209ENST00000638375 HLTFQ14527 1009 aaKnown RBP eCLIP19.26■□□□□ 0.67
HLA-A-209ENST00000638375 KCTD16Q68DU8 428 aa19.26■□□□□ 0.67
HLA-A-209ENST00000638375 KIAA0930Q6ICG6 404 aaPredicted RBP19.26■□□□□ 0.67
HLA-A-209ENST00000638375 AFTPHQ6ULP2 937 aa19.26■□□□□ 0.67
HLA-A-209ENST00000638375 ASCL5Q7RTU5 278 aa19.26■□□□□ 0.67
HLA-A-209ENST00000638375 SNX20Q7Z614 316 aa19.26■□□□□ 0.67
HLA-A-209ENST00000638375 ANKMY2Q8IV38 441 aa19.26■□□□□ 0.67
HLA-A-209ENST00000638375 IFT20Q8IY31 132 aa19.26■□□□□ 0.67
HLA-A-209ENST00000638375 DCLK2Q8N568 766 aa19.26■□□□□ 0.67
HLA-A-209ENST00000638375 FBXO36Q8NEA4 188 aa19.26■□□□□ 0.67
HLA-A-209ENST00000638375 BTN2A2Q8WVV5 523 aa19.26■□□□□ 0.67
HLA-A-209ENST00000638375 SKA1Q96BD8 255 aa19.26■□□□□ 0.67
HLA-A-209ENST00000638375 FOXP3Q9BZS1 431 aa19.26■□□□□ 0.67
HLA-A-209ENST00000638375 PHACTR1Q9C0D0 580 aa19.26■□□□□ 0.67
HLA-A-209ENST00000638375 ANKZF1Q9H8Y5 726 aa19.26■□□□□ 0.67
HLA-A-209ENST00000638375 ARFGAP3Q9NP61 516 aa19.26■□□□□ 0.67
HLA-A-209ENST00000638375 SAYSD1Q9NPB0 183 aa19.26■□□□□ 0.67
HLA-A-209ENST00000638375 PARD6AQ9NPB6 346 aa19.26■□□□□ 0.67
HLA-A-209ENST00000638375 SMOXQ9NWM0 555 aa19.26■□□□□ 0.67
HLA-A-209ENST00000638375 PNMA8BQ9ULN7 279 aaPredicted RBP19.26■□□□□ 0.67
HLA-A-209ENST00000638375 SNX11Q9Y5W9 270 aa19.26■□□□□ 0.67
HLA-A-209ENST00000638375 SLC30A1Q9Y6M5 507 aa19.26■□□□□ 0.67
HLA-A-209ENST00000638375 PCDH15Q96QU1 1955 aa19.25■□□□□ 0.67
HLA-A-209ENST00000638375 TRBV5-4A0A0C4DH59 114 aa19.25■□□□□ 0.67
HLA-A-209ENST00000638375 SPTY2D1-AS1A0A0U1RR47 76 aa19.25■□□□□ 0.67
HLA-A-209ENST00000638375 TMEM202A6NGA9 273 aa19.25■□□□□ 0.67
HLA-A-209ENST00000638375 ZNF806P0C7X5 589 aa19.25■□□□□ 0.67
HLA-A-209ENST00000638375 ITGALP20701 1170 aa19.25■□□□□ 0.67
HLA-A-209ENST00000638375 ARCN1P48444 511 aaKnown RBP19.25■□□□□ 0.67
HLA-A-209ENST00000638375 PRAMEP78395 509 aa19.25■□□□□ 0.67
HLA-A-209ENST00000638375 CACNG1Q06432 222 aa19.25■□□□□ 0.67
HLA-A-209ENST00000638375 CRYMQ14894 314 aa19.25■□□□□ 0.67
HLA-A-209ENST00000638375 SMAD1Q15797 465 aaKnown RBP19.25■□□□□ 0.67
HLA-A-209ENST00000638375 KHDC1Q4VXA5 237 aaKnown RBP19.25■□□□□ 0.67
HLA-A-209ENST00000638375 ZRANB3Q5FWF4 1079 aa19.25■□□□□ 0.67
HLA-A-209ENST00000638375 ZNF648Q5T619 568 aaPredicted RBP19.25■□□□□ 0.67
HLA-A-209ENST00000638375 PSAPL1Q6NUJ1 521 aa19.25■□□□□ 0.67
HLA-A-209ENST00000638375 MACC1Q6ZN28 852 aa19.25■□□□□ 0.67
HLA-A-209ENST00000638375 DCP2Q8IU60 420 aaKnown RBP19.25■□□□□ 0.67
HLA-A-209ENST00000638375 PIANPQ8IYJ0 282 aa19.25■□□□□ 0.67
HLA-A-209ENST00000638375 ZBED8Q8IZ13 594 aa19.25■□□□□ 0.67
HLA-A-209ENST00000638375 OR6P1Q8NGX9 317 aa19.25■□□□□ 0.67
HLA-A-209ENST00000638375 WDR92Q96MX6 357 aa19.25■□□□□ 0.67
HLA-A-209ENST00000638375 NAT9Q9BTE0 207 aa19.25■□□□□ 0.67
HLA-A-209ENST00000638375 CAAP1Q9H8G2 361 aa19.25■□□□□ 0.67
HLA-A-209ENST00000638375 NOL12Q9UGY1 213 aaKnown RBP eCLIP19.25■□□□□ 0.671e-7■□□□□ 8.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms