RNA–Protein interactions for RNA: ENST00000637450.1

CLN6-220, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3

Gene CLN6, Length 868 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-220ENST00000637450 CCNYQ8ND76 341 aa18.32■□□□□ 0.52
CLN6-220ENST00000637450 SLC37A2Q8TED4 501 aa18.32■□□□□ 0.52
CLN6-220ENST00000637450 HDAC11Q96DB2 347 aa18.32■□□□□ 0.52
CLN6-220ENST00000637450 FAM83DQ9H4H8 585 aa18.32■□□□□ 0.52
CLN6-220ENST00000637450 TMEM9Q9P0T7 183 aa18.32■□□□□ 0.52
CLN6-220ENST00000637450 IFNKQ9P0W0 207 aa18.32■□□□□ 0.52
CLN6-220ENST00000637450 PDP2Q9P2J9 529 aa18.32■□□□□ 0.52
CLN6-220ENST00000637450 OAS3Q9Y6K5 1087 aaKnown RBP18.32■□□□□ 0.52
CLN6-220ENST00000637450 C1orf232A0A0U1RR37 186 aa18.31■□□□□ 0.52
CLN6-220ENST00000637450 RGSL1A5PLK6 1076 aa18.31■□□□□ 0.52
CLN6-220ENST00000637450 ANKRD66B4E2M5 251 aa18.31■□□□□ 0.52
CLN6-220ENST00000637450 GOLGA6L19H0YKK7 550 aa18.31■□□□□ 0.52
CLN6-220ENST00000637450 EML2O95834 649 aa18.31■□□□□ 0.52
CLN6-220ENST00000637450 JCHAINP01591 159 aa18.31■□□□□ 0.52
CLN6-220ENST00000637450 ATP1A1P05023 1023 aaKnown RBP18.31■□□□□ 0.52
CLN6-220ENST00000637450 KDELR1P24390 212 aa18.31■□□□□ 0.52
CLN6-220ENST00000637450 CSTF2P33240 577 aaKnown RBP eCLIP18.31■□□□□ 0.52
CLN6-220ENST00000637450 QPCTQ16769 361 aa18.31■□□□□ 0.52
CLN6-220ENST00000637450 CHCHD2P9Q5T1J5 151 aaPredicted RBP18.31■□□□□ 0.52
CLN6-220ENST00000637450 HENMT1Q5T8I9 393 aaKnown RBP18.31■□□□□ 0.52
CLN6-220ENST00000637450 CTNNBL1Q8WYA6 563 aaPredicted RBP18.31■□□□□ 0.52
CLN6-220ENST00000637450 RAPGEF5Q92565 580 aa18.31■□□□□ 0.52
CLN6-220ENST00000637450 PMEPA1Q969W9 287 aa18.31■□□□□ 0.52
CLN6-220ENST00000637450 RNF157Q96PX1 679 aa18.31■□□□□ 0.52
CLN6-220ENST00000637450 SLC38A3Q99624 504 aa18.31■□□□□ 0.52
CLN6-220ENST00000637450 ARHGAP9Q9BRR9 750 aa18.31■□□□□ 0.52
CLN6-220ENST00000637450 MLPHQ9BV36 600 aaPredicted RBP18.31■□□□□ 0.52
CLN6-220ENST00000637450 PACSIN1Q9BY11 444 aa18.31■□□□□ 0.52
CLN6-220ENST00000637450 PRKAB1Q9Y478 270 aa18.31■□□□□ 0.52
CLN6-220ENST00000637450 B4E171 279 aa18.3■□□□□ 0.52
CLN6-220ENST00000637450 MAN1A1P33908 653 aa18.3■□□□□ 0.52
CLN6-220ENST00000637450 TSPAN7P41732 249 aa18.3■□□□□ 0.52
CLN6-220ENST00000637450 CD86P42081 329 aa18.3■□□□□ 0.52
CLN6-220ENST00000637450 PPIDQ08752 370 aaKnown RBP18.3■□□□□ 0.52
CLN6-220ENST00000637450 SLC18A3Q16572 532 aa18.3■□□□□ 0.52
CLN6-220ENST00000637450 TBR1Q16650 682 aa18.3■□□□□ 0.52
CLN6-220ENST00000637450 ASTE1Q2TB18 679 aaPredicted RBP18.3■□□□□ 0.52
CLN6-220ENST00000637450 IYDQ6PHW0 289 aa18.3■□□□□ 0.52
CLN6-220ENST00000637450 CHST15Q7LFX5 561 aaPredicted RBP18.3■□□□□ 0.52
CLN6-220ENST00000637450 ZNF761Q86XN6 746 aaPredicted RBP18.3■□□□□ 0.52
CLN6-220ENST00000637450 CNTD1Q8N815 330 aa18.3■□□□□ 0.52
CLN6-220ENST00000637450 CCDC112Q8NEF3 446 aa18.3■□□□□ 0.52
CLN6-220ENST00000637450 CCHCR1Q8TD31 782 aa18.3■□□□□ 0.52
CLN6-220ENST00000637450 JPH3Q8WXH2 748 aaPredicted RBP18.3■□□□□ 0.52
CLN6-220ENST00000637450 ART4Q93070 314 aa18.3■□□□□ 0.52
CLN6-220ENST00000637450 NKD1Q969G9 470 aa18.3■□□□□ 0.52
CLN6-220ENST00000637450 AHCYL2Q96HN2 611 aaKnown RBP18.3■□□□□ 0.52
CLN6-220ENST00000637450 DDA1Q9BW61 102 aa18.3■□□□□ 0.52
CLN6-220ENST00000637450 RMI1Q9H9A7 625 aa18.3■□□□□ 0.52
CLN6-220ENST00000637450 OCIAD1Q9NX40 245 aa18.3■□□□□ 0.52
CLN6-220ENST00000637450 PKD2L2Q9NZM6 624 aa18.3■□□□□ 0.52
CLN6-220ENST00000637450 TBC1D29Q9UFV1 150 aa18.3■□□□□ 0.52
CLN6-220ENST00000637450 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP18.3■□□□□ 0.522e-8■■■□□ 18
CLN6-220ENST00000637450 B3GALT1Q9Y5Z6 326 aa18.3■□□□□ 0.52
CLN6-220ENST00000637450 FADS2P1A8MWK0 482 aa18.29■□□□□ 0.52
CLN6-220ENST00000637450 KCNK1O00180 336 aa18.29■□□□□ 0.52
CLN6-220ENST00000637450 ITGB6P18564 788 aa18.29■□□□□ 0.52
CLN6-220ENST00000637450 CYP4F2P78329 520 aa18.29■□□□□ 0.52
CLN6-220ENST00000637450 IFI35P80217 286 aaPredicted RBP18.29■□□□□ 0.52
CLN6-220ENST00000637450 WDR74Q6RFH5 385 aaPredicted RBP18.29■□□□□ 0.52
CLN6-220ENST00000637450 PLD5Q8N7P1 536 aa18.29■□□□□ 0.52
CLN6-220ENST00000637450 OR10G6Q8NH81 332 aa18.29■□□□□ 0.52
CLN6-220ENST00000637450 HTR3CQ8WXA8 447 aa18.29■□□□□ 0.52
CLN6-220ENST00000637450 EID2BQ96D98 161 aa18.29■□□□□ 0.52
CLN6-220ENST00000637450 ZNF830Q96NB3 372 aaPredicted RBP18.29■□□□□ 0.52
CLN6-220ENST00000637450 ADGRE3Q9BY15 652 aa18.29■□□□□ 0.52
CLN6-220ENST00000637450 ASPSCR1Q9BZE9 553 aa18.29■□□□□ 0.52
CLN6-220ENST00000637450 SARS2Q9NP81 518 aaKnown RBP18.29■□□□□ 0.52
CLN6-220ENST00000637450 STARD5Q9NSY2 213 aa18.29■□□□□ 0.52
CLN6-220ENST00000637450 SLC39A1Q9NY26 324 aa18.29■□□□□ 0.52
CLN6-220ENST00000637450 SPTA1P02549 2419 aa18.28■□□□□ 0.52
CLN6-220ENST00000637450 A6NCN8 305 aa18.28■□□□□ 0.52
CLN6-220ENST00000637450 EFCAB7A8K855 629 aa18.28■□□□□ 0.52
CLN6-220ENST00000637450 ZNF487B1APH4 448 aa18.28■□□□□ 0.52
CLN6-220ENST00000637450 DUX1O43812 170 aa18.28■□□□□ 0.52
CLN6-220ENST00000637450 SLC28A2O43868 658 aa18.28■□□□□ 0.52
CLN6-220ENST00000637450 TMEM253P0C7T8 217 aa18.28■□□□□ 0.52
CLN6-220ENST00000637450 UGT1A3P35503 534 aa18.28■□□□□ 0.52
CLN6-220ENST00000637450 ATP1A2P50993 1020 aa18.28■□□□□ 0.52
CLN6-220ENST00000637450 HHEXQ03014 270 aa18.28■□□□□ 0.52
CLN6-220ENST00000637450 NFATC3Q12968 1075 aa18.28■□□□□ 0.52
CLN6-220ENST00000637450 ZBTB17Q13105 803 aa18.28■□□□□ 0.52
CLN6-220ENST00000637450 ZFYVE27Q5T4F4 411 aa18.28■□□□□ 0.52
CLN6-220ENST00000637450 LYSMD3Q7Z3D4 306 aa18.28■□□□□ 0.52
CLN6-220ENST00000637450 ARHGAP22Q7Z5H3 698 aa18.28■□□□□ 0.52
CLN6-220ENST00000637450 SH3KBP1Q96B97 665 aa18.28■□□□□ 0.52
CLN6-220ENST00000637450 KCNK6Q9Y257 313 aa18.28■□□□□ 0.52
CLN6-220ENST00000637450 TLN1Q9Y490 2541 aaKnown RBP18.27■□□□□ 0.52
CLN6-220ENST00000637450 C3orf70A6NLC5 250 aaPredicted RBP18.27■□□□□ 0.52
CLN6-220ENST00000637450 NUAK1O60285 661 aa18.27■□□□□ 0.52
CLN6-220ENST00000637450 FAM87AP0C7U9 286 aa18.27■□□□□ 0.52
CLN6-220ENST00000637450 SFTPCP11686 197 aa18.27■□□□□ 0.52
CLN6-220ENST00000637450 ACP5P13686 325 aa18.27■□□□□ 0.52
CLN6-220ENST00000637450 NFATC2Q13469 925 aa18.27■□□□□ 0.52
CLN6-220ENST00000637450 MESDQ14696 234 aa18.27■□□□□ 0.52
CLN6-220ENST00000637450 DCAF12Q5T6F0 453 aa18.27■□□□□ 0.52
CLN6-220ENST00000637450 SLC9A4Q6AI14 798 aa18.27■□□□□ 0.52
CLN6-220ENST00000637450 SLC9B2Q86UD5 537 aa18.27■□□□□ 0.52
CLN6-220ENST00000637450 VSIG1Q86XK7 387 aa18.27■□□□□ 0.52
CLN6-220ENST00000637450 FAM129CQ86XR2 697 aa18.27■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms