RNA–Protein interactions for RNA: ENST00000636876.1

CLN6-216, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 655 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-216ENST00000636876 ATP13A5Q4VNC0 1218 aa15.89■□□□□ 0.13
CLN6-216ENST00000636876 TRIM61Q5EBN2 209 aa15.89■□□□□ 0.13
CLN6-216ENST00000636876 TPRG1LQ5T0D9 272 aa15.89■□□□□ 0.13
CLN6-216ENST00000636876 CES3Q6UWW8 571 aa15.89■□□□□ 0.13
CLN6-216ENST00000636876 ZNF398Q8TD17 642 aa15.89■□□□□ 0.13
CLN6-216ENST00000636876 IFT81Q8WYA0 676 aa15.89■□□□□ 0.13
CLN6-216ENST00000636876 HDAC10Q969S8 669 aa15.89■□□□□ 0.13
CLN6-216ENST00000636876 HIC2Q96JB3 615 aa15.89■□□□□ 0.13
CLN6-216ENST00000636876 EBNA1BP2Q99848 306 aaKnown RBP15.89■□□□□ 0.13
CLN6-216ENST00000636876 TRIM56Q9BRZ2 755 aaKnown RBP15.89■□□□□ 0.13
CLN6-216ENST00000636876 NAT9Q9BTE0 207 aa15.89■□□□□ 0.13
CLN6-216ENST00000636876 FOXP3Q9BZS1 431 aa15.89■□□□□ 0.13
CLN6-216ENST00000636876 PHACTR1Q9C0D0 580 aa15.89■□□□□ 0.13
CLN6-216ENST00000636876 SMOC1Q9H4F8 434 aa15.89■□□□□ 0.13
CLN6-216ENST00000636876 SUDS3Q9H7L9 328 aaPredicted RBP15.89■□□□□ 0.13
CLN6-216ENST00000636876 GDF3Q9NR23 364 aa15.89■□□□□ 0.13
CLN6-216ENST00000636876 ANKRD6Q9Y2G4 727 aa15.89■□□□□ 0.13
CLN6-216ENST00000636876 CCDC162PA2VCL2 907 aa15.88■□□□□ 0.13
CLN6-216ENST00000636876 CACNB4O00305 520 aaPredicted RBP15.88■□□□□ 0.13
CLN6-216ENST00000636876 INPP4BO15327 924 aa15.88■□□□□ 0.13
CLN6-216ENST00000636876 EIF3HO15372 352 aaKnown RBP eCLIP15.88■□□□□ 0.13
CLN6-216ENST00000636876 UGT1A9O60656 530 aa15.88■□□□□ 0.13
CLN6-216ENST00000636876 LRP3O75074 770 aa15.88■□□□□ 0.13
CLN6-216ENST00000636876 MYCLP1P12525 358 aaPredicted RBP15.88■□□□□ 0.13
CLN6-216ENST00000636876 PGAM1P18669 254 aa15.88■□□□□ 0.13
CLN6-216ENST00000636876 UGT1A6P19224 532 aa15.88■□□□□ 0.13
CLN6-216ENST00000636876 ITGALP20701 1170 aa15.88■□□□□ 0.13
CLN6-216ENST00000636876 UGT1A1P22309 533 aa15.88■□□□□ 0.13
CLN6-216ENST00000636876 UGT1A4P22310 534 aa15.88■□□□□ 0.13
CLN6-216ENST00000636876 MC4RP32245 332 aa15.88■□□□□ 0.13
CLN6-216ENST00000636876 UGT1A3P35503 534 aa15.88■□□□□ 0.13
CLN6-216ENST00000636876 UGT1A5P35504 534 aa15.88■□□□□ 0.13
CLN6-216ENST00000636876 ELK3P41970 407 aa15.88■□□□□ 0.13
CLN6-216ENST00000636876 CTSKP43235 329 aa15.88■□□□□ 0.13
CLN6-216ENST00000636876 CARSP49589 748 aaKnown RBP15.88■□□□□ 0.13
CLN6-216ENST00000636876 THOP1P52888 689 aa15.88■□□□□ 0.13
CLN6-216ENST00000636876 PRAMEP78395 509 aa15.88■□□□□ 0.13
CLN6-216ENST00000636876 PDIA2Q13087 525 aaKnown RBP15.88■□□□□ 0.13
CLN6-216ENST00000636876 NFATC2Q13469 925 aa15.88■□□□□ 0.13
CLN6-216ENST00000636876 CUL1Q13616 776 aa15.88■□□□□ 0.13
CLN6-216ENST00000636876 ITGA9Q13797 1035 aa15.88■□□□□ 0.13
CLN6-216ENST00000636876 PDE1CQ14123 709 aaPredicted RBP15.88■□□□□ 0.13
CLN6-216ENST00000636876 ANKRD20A4Q4UJ75 823 aa15.88■□□□□ 0.13
CLN6-216ENST00000636876 AFTPHQ6ULP2 937 aa15.88■□□□□ 0.13
CLN6-216ENST00000636876 MICALCLQ6ZW33 695 aa15.88■□□□□ 0.13
CLN6-216ENST00000636876 CENPUQ71F23 418 aa15.88■□□□□ 0.13
CLN6-216ENST00000636876 TMEM135Q86UB9 458 aa15.88■□□□□ 0.13
CLN6-216ENST00000636876 SPATS2Q86XZ4 545 aaKnown RBP15.88■□□□□ 0.13
CLN6-216ENST00000636876 IGDCC3Q8IVU1 814 aa15.88■□□□□ 0.13
CLN6-216ENST00000636876 IFT20Q8IY31 132 aa15.88■□□□□ 0.13
CLN6-216ENST00000636876 SLC22A18ASQ8N1D0 253 aa15.88■□□□□ 0.13
CLN6-216ENST00000636876 BTN2A2Q8WVV5 523 aa15.88■□□□□ 0.13
CLN6-216ENST00000636876 RUBCNQ92622 972 aa15.88■□□□□ 0.13
CLN6-216ENST00000636876 GLYATL1Q969I3 302 aa15.88■□□□□ 0.13
CLN6-216ENST00000636876 ZNF669Q96BR6 464 aaPredicted RBP15.88■□□□□ 0.13
CLN6-216ENST00000636876 MFSD3Q96ES6 412 aa15.88■□□□□ 0.13
CLN6-216ENST00000636876 COX14Q96I36 57 aa15.88■□□□□ 0.13
CLN6-216ENST00000636876 VPS35Q96QK1 796 aa15.88■□□□□ 0.13
CLN6-216ENST00000636876 WDR83Q9BRX9 315 aaKnown RBP15.88■□□□□ 0.13
CLN6-216ENST00000636876 LGR4Q9BXB1 951 aa15.88■□□□□ 0.13
CLN6-216ENST00000636876 NUSAP1Q9BXS6 441 aaKnown RBP15.88■□□□□ 0.13
CLN6-216ENST00000636876 UGT1A7Q9HAW7 530 aa15.88■□□□□ 0.13
CLN6-216ENST00000636876 UGT1A10Q9HAW8 530 aa15.88■□□□□ 0.13
CLN6-216ENST00000636876 UGT1A8Q9HAW9 530 aa15.88■□□□□ 0.13
CLN6-216ENST00000636876 SMOXQ9NWM0 555 aa15.88■□□□□ 0.13
CLN6-216ENST00000636876 TMPRSS11EQ9UL52 423 aa15.88■□□□□ 0.13
CLN6-216ENST00000636876 CHMP2BQ9UQN3 213 aa15.88■□□□□ 0.13
CLN6-216ENST00000636876 TEX264Q9Y6I9 313 aa15.88■□□□□ 0.13
CLN6-216ENST00000636876 SLC30A1Q9Y6M5 507 aa15.88■□□□□ 0.13
CLN6-216ENST00000636876 SPTY2D1-AS1A0A0U1RR47 76 aa15.87■□□□□ 0.13
CLN6-216ENST00000636876 KHNYNO15037 678 aaKnown RBP15.87■□□□□ 0.13
CLN6-216ENST00000636876 GPR39O43194 453 aa15.87■□□□□ 0.13
CLN6-216ENST00000636876 USP1O94782 785 aa15.87■□□□□ 0.13
CLN6-216ENST00000636876 ZNF806P0C7X5 589 aa15.87■□□□□ 0.13
CLN6-216ENST00000636876 KELP23276 732 aa15.87■□□□□ 0.13
CLN6-216ENST00000636876 HTR1BP28222 390 aa15.87■□□□□ 0.13
CLN6-216ENST00000636876 CA5AP35218 305 aa15.87■□□□□ 0.13
CLN6-216ENST00000636876 SPEM2Q0P670 501 aa15.87■□□□□ 0.13
CLN6-216ENST00000636876 GRIK2Q13002 908 aa15.87■□□□□ 0.13
CLN6-216ENST00000636876 PTK2BQ14289 1009 aa15.87■□□□□ 0.13
CLN6-216ENST00000636876 HLTFQ14527 1009 aaKnown RBP eCLIP15.87■□□□□ 0.13
CLN6-216ENST00000636876 FASTKD3Q14CZ7 662 aaKnown RBP15.87■□□□□ 0.13
CLN6-216ENST00000636876 KIF19Q2TAC6 998 aa15.87■□□□□ 0.13
CLN6-216ENST00000636876 GPR33Q49SQ1 333 aa15.87■□□□□ 0.13
CLN6-216ENST00000636876 ZRANB3Q5FWF4 1079 aa15.87■□□□□ 0.13
CLN6-216ENST00000636876 HP1BP3Q5SSJ5 553 aaPredicted RBP15.87■□□□□ 0.13
CLN6-216ENST00000636876 KIAA0930Q6ICG6 404 aaPredicted RBP15.87■□□□□ 0.13
CLN6-216ENST00000636876 TCEAL6Q6IPX3 200 aa15.87■□□□□ 0.13
CLN6-216ENST00000636876 MACC1Q6ZN28 852 aa15.87■□□□□ 0.13
CLN6-216ENST00000636876 SNX20Q7Z614 316 aa15.87■□□□□ 0.13
CLN6-216ENST00000636876 TRIM74Q86UV6 250 aa15.87■□□□□ 0.13
CLN6-216ENST00000636876 PHYKPLQ8IUZ5 450 aa15.87■□□□□ 0.13
CLN6-216ENST00000636876 CCNJLQ8IV13 435 aa15.87■□□□□ 0.13
CLN6-216ENST00000636876 OR6P1Q8NGX9 317 aa15.87■□□□□ 0.13
CLN6-216ENST00000636876 TCEAL3Q969E4 200 aa15.87■□□□□ 0.13
CLN6-216ENST00000636876 SGSM3Q96HU1 749 aa15.87■□□□□ 0.13
CLN6-216ENST00000636876 WDR92Q96MX6 357 aa15.87■□□□□ 0.13
CLN6-216ENST00000636876 FCRL3Q96P31 734 aaPredicted RBP15.87■□□□□ 0.13
CLN6-216ENST00000636876 ZDHHC5Q9C0B5 715 aa15.87■□□□□ 0.13
CLN6-216ENST00000636876 ASB8Q9H765 288 aa15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms