RNA–Protein interactions for RNA: ENST00000625293.1

TREX1-205, Transcript of three prime repair exonuclease 1, humanhuman

BASIC

Gene TREX1, Length 1,783 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-205ENST00000625293 MAELQ96JY0 434 aaKnown RBP19.55■□□□□ 0.72
TREX1-205ENST00000625293 ZSWIM3Q96MP5 696 aa19.55■□□□□ 0.72
TREX1-205ENST00000625293 TUBGCP5Q96RT8 1024 aa19.55■□□□□ 0.72
TREX1-205ENST00000625293 GPR21Q99679 349 aa19.55■□□□□ 0.72
TREX1-205ENST00000625293 SLC30A3Q99726 388 aa19.55■□□□□ 0.72
TREX1-205ENST00000625293 TRMOQ9BU70 441 aa19.55■□□□□ 0.72
TREX1-205ENST00000625293 CCDC28BQ9BUN5 200 aa19.55■□□□□ 0.72
TREX1-205ENST00000625293 OSBPL1AQ9BXW6 950 aa19.55■□□□□ 0.72
TREX1-205ENST00000625293 NUF2Q9BZD4 464 aa19.55■□□□□ 0.72
TREX1-205ENST00000625293 CEP44Q9C0F1 390 aa19.55■□□□□ 0.72
TREX1-205ENST00000625293 C1orf21Q9H246 121 aa19.55■□□□□ 0.72
TREX1-205ENST00000625293 LINC00597Q9H2U6 94 aa19.55■□□□□ 0.72
TREX1-205ENST00000625293 MMADHCQ9H3L0 296 aaPredicted RBP19.55■□□□□ 0.72
TREX1-205ENST00000625293 WDR55Q9H6Y2 383 aaPredicted RBP19.55■□□□□ 0.72
TREX1-205ENST00000625293 ZFYVE1Q9HBF4 777 aa19.55■□□□□ 0.72
TREX1-205ENST00000625293 GALPQ9UBC7 116 aa19.55■□□□□ 0.72
TREX1-205ENST00000625293 IKZF3Q9UKT9 509 aa19.55■□□□□ 0.72
TREX1-205ENST00000625293 PLA2G4CQ9UP65 541 aa19.55■□□□□ 0.72
TREX1-205ENST00000625293 FAM50BQ9Y247 325 aa19.55■□□□□ 0.72
TREX1-205ENST00000625293 COMMD10Q9Y6G5 202 aa19.55■□□□□ 0.72
TREX1-205ENST00000625293 ATG2AQ2TAZ0 1938 aa19.54■□□□□ 0.72
TREX1-205ENST00000625293 E9PBE3 544 aa19.54■□□□□ 0.72
TREX1-205ENST00000625293 NEDD8-MDP1E9PL57 170 aa19.54■□□□□ 0.72
TREX1-205ENST00000625293 KLHL41O60662 606 aa19.54■□□□□ 0.72
TREX1-205ENST00000625293 PABPC1P11940 636 aaKnown RBP19.54■□□□□ 0.72
TREX1-205ENST00000625293 SERPINA4P29622 427 aa19.54■□□□□ 0.72
TREX1-205ENST00000625293 ATP6V0D1P61421 351 aa19.54■□□□□ 0.72
TREX1-205ENST00000625293 SNRPD1P62314 119 aaKnown RBP19.54■□□□□ 0.72
TREX1-205ENST00000625293 MYLK3Q32MK0 819 aa19.54■□□□□ 0.72
TREX1-205ENST00000625293 LSM12Q3MHD2 195 aaKnown RBP19.54■□□□□ 0.72
TREX1-205ENST00000625293 UNC50Q53HI1 259 aa19.54■□□□□ 0.72
TREX1-205ENST00000625293 KIAA0907Q7Z7F0 614 aaPredicted RBP19.54■□□□□ 0.72
TREX1-205ENST00000625293 SUGP1Q8IWZ8 645 aaKnown RBP19.54■□□□□ 0.72
TREX1-205ENST00000625293 PHTF2Q8N3S3 785 aa19.54■□□□□ 0.72
TREX1-205ENST00000625293 KCNJ9Q92806 393 aa19.54■□□□□ 0.72
TREX1-205ENST00000625293 FAM136AQ96C01 138 aa19.54■□□□□ 0.72
TREX1-205ENST00000625293 BBS2Q9BXC9 721 aa19.54■□□□□ 0.72
TREX1-205ENST00000625293 ZNF385DQ9H6B1 395 aa19.54■□□□□ 0.72
TREX1-205ENST00000625293 TNFRSF12AQ9NP84 129 aa19.54■□□□□ 0.72
TREX1-205ENST00000625293 SPHK2Q9NRA0 654 aa19.54■□□□□ 0.72
TREX1-205ENST00000625293 SDAD1Q9NVU7 687 aaKnown RBP eCLIP19.54■□□□□ 0.72
TREX1-205ENST00000625293 ZDHHC7Q9NXF8 308 aa19.54■□□□□ 0.72
TREX1-205ENST00000625293 MARK1Q9P0L2 795 aa19.54■□□□□ 0.72
TREX1-205ENST00000625293 TBC1D14Q9P2M4 693 aa19.54■□□□□ 0.72
TREX1-205ENST00000625293 ZMYM5Q9UJ78 669 aa19.54■□□□□ 0.72
TREX1-205ENST00000625293 PPIL1Q9Y3C6 166 aa19.54■□□□□ 0.72
TREX1-205ENST00000625293 HCFC2Q9Y5Z7 792 aa19.54■□□□□ 0.72
TREX1-205ENST00000625293 TMEM233B4DJY2 109 aa19.53■□□□□ 0.72
TREX1-205ENST00000625293 GPR39O43194 453 aa19.53■□□□□ 0.72
TREX1-205ENST00000625293 TSPAN12O95859 305 aa19.53■□□□□ 0.72
TREX1-205ENST00000625293 ESR1P03372 595 aa19.53■□□□□ 0.72
TREX1-205ENST00000625293 PYGLP06737 847 aa19.53■□□□□ 0.72
TREX1-205ENST00000625293 TPBGLP0DKB5 382 aa19.53■□□□□ 0.72
TREX1-205ENST00000625293 PRDX6P30041 224 aa19.53■□□□□ 0.72
TREX1-205ENST00000625293 NAA25Q14CX7 972 aa19.53■□□□□ 0.72
TREX1-205ENST00000625293 SKIV2LQ15477 1246 aaKnown RBP19.53■□□□□ 0.72
TREX1-205ENST00000625293 SH2D4BQ5SQS7 431 aa19.53■□□□□ 0.72
TREX1-205ENST00000625293 WASHC2DQ5SRD0 308 aa19.53■□□□□ 0.72
TREX1-205ENST00000625293 GRASPQ7Z6J2 395 aaPredicted RBP19.53■□□□□ 0.72
TREX1-205ENST00000625293 RBM23Q86U06 439 aaKnown RBP19.53■□□□□ 0.72
TREX1-205ENST00000625293 CUZD1Q86UP6 607 aa19.53■□□□□ 0.72
TREX1-205ENST00000625293 STK40Q8N2I9 435 aa19.53■□□□□ 0.72
TREX1-205ENST00000625293 ZNF557Q8N988 423 aaPredicted RBP19.53■□□□□ 0.72
TREX1-205ENST00000625293 GIMAP7Q8NHV1 300 aa19.53■□□□□ 0.72
TREX1-205ENST00000625293 CPEB1Q9BZB8 566 aaKnown RBP19.53■□□□□ 0.72
TREX1-205ENST00000625293 EML4Q9HC35 981 aaKnown RBP19.53■□□□□ 0.72
TREX1-205ENST00000625293 LMCD1Q9NZU5 365 aa19.53■□□□□ 0.72
TREX1-205ENST00000625293 C5orf42Q9H799 3197 aa19.53■□□□□ 0.72
TREX1-205ENST00000625293 GOLGA8QA0A0J9YX86 632 aa19.52■□□□□ 0.72
TREX1-205ENST00000625293 GOLGA8OA6NCC3 632 aa19.52■□□□□ 0.72
TREX1-205ENST00000625293 GOLGA8NF8WBI6 632 aa19.52■□□□□ 0.72
TREX1-205ENST00000625293 PER2O15055 1255 aa19.52■□□□□ 0.72
TREX1-205ENST00000625293 KERAO60938 352 aa19.52■□□□□ 0.72
TREX1-205ENST00000625293 SMIM24O75264 130 aa19.52■□□□□ 0.72
TREX1-205ENST00000625293 NIPSNAP2O75323 286 aa19.52■□□□□ 0.72
TREX1-205ENST00000625293 VPS26AO75436 327 aa19.52■□□□□ 0.72
TREX1-205ENST00000625293 TYRP14679 529 aa19.52■□□□□ 0.72
TREX1-205ENST00000625293 CEBPBP17676 345 aa19.52■□□□□ 0.72
TREX1-205ENST00000625293 NCF2P19878 526 aaPredicted RBP19.52■□□□□ 0.72
TREX1-205ENST00000625293 EPHA3P29320 983 aa19.52■□□□□ 0.72
TREX1-205ENST00000625293 CPOXP36551 454 aa19.52■□□□□ 0.72
TREX1-205ENST00000625293 HERVK_113P63132 956 aa19.52■□□□□ 0.72
TREX1-205ENST00000625293 RAD51Q06609 339 aa19.52■□□□□ 0.72
TREX1-205ENST00000625293 DMC1Q14565 340 aa19.52■□□□□ 0.72
TREX1-205ENST00000625293 CERS6Q6ZMG9 384 aa19.52■□□□□ 0.72
TREX1-205ENST00000625293 RPS27LQ71UM5 84 aaKnown RBP19.52■□□□□ 0.72
TREX1-205ENST00000625293 ADIPOR2Q86V24 386 aa19.52■□□□□ 0.72
TREX1-205ENST00000625293 RYBPQ8N488 228 aaPredicted RBP19.52■□□□□ 0.72
TREX1-205ENST00000625293 NKAPQ8N5F7 415 aaKnown RBP19.52■□□□□ 0.72
TREX1-205ENST00000625293 CPSF7Q8N684 471 aaKnown RBP19.52■□□□□ 0.72
TREX1-205ENST00000625293 PCDH20Q8N6Y1 951 aaKnown RBP19.52■□□□□ 0.72
TREX1-205ENST00000625293 CD200R1Q8TD46 325 aa19.52■□□□□ 0.72
TREX1-205ENST00000625293 ERVK-6Q9BXR3 956 aa19.52■□□□□ 0.72
TREX1-205ENST00000625293 DENND2DQ9H6A0 471 aaPredicted RBP19.52■□□□□ 0.72
TREX1-205ENST00000625293 CDYLQ9Y232 598 aa19.52■□□□□ 0.72
TREX1-205ENST00000625293 SLC30A1Q9Y6M5 507 aa19.52■□□□□ 0.72
TREX1-205ENST00000625293 TRBV5-4A0A0C4DH59 114 aa19.52■□□□□ 0.71
TREX1-205ENST00000625293 C1orf232A0A0U1RR37 186 aa19.52■□□□□ 0.71
TREX1-205ENST00000625293 UBFD1O14562 309 aaKnown RBP19.52■□□□□ 0.71
TREX1-205ENST00000625293 DCXO43602 365 aa19.52■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms