RNA–Protein interactions for RNA: ENST00000621728.4

SEMA6C-210, Transcript of semaphorin 6C, humanhuman

TSL 1 (best) BASIC

Gene SEMA6C, Length 1,918 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6C-210ENST00000621728 ACTR5Q9H9F9 607 aaPredicted RBP18.49■□□□□ 0.55
SEMA6C-210ENST00000621728 ZNF358Q9NW07 568 aa18.49■□□□□ 0.55
SEMA6C-210ENST00000621728 COPEO14579 308 aa18.49■□□□□ 0.55
SEMA6C-210ENST00000621728 MMP20O60882 483 aa18.49■□□□□ 0.55
SEMA6C-210ENST00000621728 RNASEH1O60930 286 aaKnown RBP18.49■□□□□ 0.55
SEMA6C-210ENST00000621728 NDUFS3O75489 264 aa18.49■□□□□ 0.55
SEMA6C-210ENST00000621728 FSBPO95073 299 aa18.49■□□□□ 0.55
SEMA6C-210ENST00000621728 FMO4P31512 558 aa18.49■□□□□ 0.55
SEMA6C-210ENST00000621728 CLCN5P51795 746 aa18.49■□□□□ 0.55
SEMA6C-210ENST00000621728 WDR4P57081 412 aaKnown RBP18.49■□□□□ 0.55
SEMA6C-210ENST00000621728 TAS2R38P59533 333 aa18.49■□□□□ 0.55
SEMA6C-210ENST00000621728 MRPS21P82921 87 aaKnown RBP18.49■□□□□ 0.55
SEMA6C-210ENST00000621728 DNAJC3Q13217 504 aa18.49■□□□□ 0.55
SEMA6C-210ENST00000621728 STARD3Q14849 445 aa18.49■□□□□ 0.55
SEMA6C-210ENST00000621728 ACOX1Q15067 660 aa18.49■□□□□ 0.55
SEMA6C-210ENST00000621728 ATP13A5Q4VNC0 1218 aa18.49■□□□□ 0.55
SEMA6C-210ENST00000621728 HECTD2Q5U5R9 776 aa18.49■□□□□ 0.55
SEMA6C-210ENST00000621728 AGBL4Q5VU57 503 aa18.49■□□□□ 0.55
SEMA6C-210ENST00000621728 FAM46CQ5VWP2 391 aa18.49■□□□□ 0.55
SEMA6C-210ENST00000621728 ZNF776Q68DI1 518 aaPredicted RBP18.49■□□□□ 0.55
SEMA6C-210ENST00000621728 SNX20Q7Z614 316 aa18.49■□□□□ 0.55
SEMA6C-210ENST00000621728 PIM3Q86V86 326 aa18.49■□□□□ 0.55
SEMA6C-210ENST00000621728 PLD6Q8N2A8 252 aaKnown RBP18.49■□□□□ 0.55
SEMA6C-210ENST00000621728 HDDC3Q8N4P3 179 aa18.49■□□□□ 0.55
SEMA6C-210ENST00000621728 GDAP1Q8TB36 358 aa18.49■□□□□ 0.55
SEMA6C-210ENST00000621728 ZNF398Q8TD17 642 aa18.49■□□□□ 0.55
SEMA6C-210ENST00000621728 DENND1AQ8TEH3 1009 aa18.49■□□□□ 0.55
SEMA6C-210ENST00000621728 SEC16BQ96JE7 1060 aa18.49■□□□□ 0.55
SEMA6C-210ENST00000621728 PKD2L2Q9NZM6 624 aa18.49■□□□□ 0.55
SEMA6C-210ENST00000621728 APPL1Q9UKG1 709 aa18.49■□□□□ 0.55
SEMA6C-210ENST00000621728 TMPRSS11EQ9UL52 423 aa18.49■□□□□ 0.55
SEMA6C-210ENST00000621728 A0A096LPK6 155 aa18.48■□□□□ 0.55
SEMA6C-210ENST00000621728 KRBA1A5PL33 1030 aa18.48■□□□□ 0.55
SEMA6C-210ENST00000621728 NEMP1O14524 444 aa18.48■□□□□ 0.55
SEMA6C-210ENST00000621728 C2P06681 752 aa18.48■□□□□ 0.55
SEMA6C-210ENST00000621728 ITGALP20701 1170 aa18.48■□□□□ 0.55
SEMA6C-210ENST00000621728 CSRP3P50461 194 aa18.48■□□□□ 0.55
SEMA6C-210ENST00000621728 TIAL1Q01085 375 aaKnown RBP eCLIP18.48■□□□□ 0.55
SEMA6C-210ENST00000621728 C16orf46Q6P387 395 aa18.48■□□□□ 0.55
SEMA6C-210ENST00000621728 TECPR1Q7Z6L1 1165 aa18.48■□□□□ 0.55
SEMA6C-210ENST00000621728 TMPRSS6Q8IU80 811 aa18.48■□□□□ 0.55
SEMA6C-210ENST00000621728 FLCNQ8NFG4 579 aa18.48■□□□□ 0.55
SEMA6C-210ENST00000621728 KCNV2Q8TDN2 545 aa18.48■□□□□ 0.55
SEMA6C-210ENST00000621728 SSU72Q9NP77 194 aaKnown RBP18.48■□□□□ 0.55
SEMA6C-210ENST00000621728 INTS10Q9NVR2 710 aaKnown RBP18.48■□□□□ 0.55
SEMA6C-210ENST00000621728 GRID1Q9ULK0 1009 aa18.48■□□□□ 0.55
SEMA6C-210ENST00000621728 SMG5Q9UPR3 1016 aaKnown RBP18.48■□□□□ 0.55
SEMA6C-210ENST00000621728 FADS3Q9Y5Q0 445 aa18.48■□□□□ 0.55
SEMA6C-210ENST00000621728 RNASEH2AO75792 299 aaKnown RBP18.47■□□□□ 0.55
SEMA6C-210ENST00000621728 ADH1BP00325 375 aa18.47■□□□□ 0.55
SEMA6C-210ENST00000621728 E2F5Q15329 346 aa18.47■□□□□ 0.55
SEMA6C-210ENST00000621728 RAPH1Q70E73 1250 aa18.47■□□□□ 0.55
SEMA6C-210ENST00000621728 PELI3Q8N2H9 469 aa18.47■□□□□ 0.55
SEMA6C-210ENST00000621728 SPATA6LQ8N4H0 392 aa18.47■□□□□ 0.55
SEMA6C-210ENST00000621728 ANKS4BQ8N8V4 417 aa18.47■□□□□ 0.55
SEMA6C-210ENST00000621728 ALKBH8Q96BT7 664 aaKnown RBP18.47■□□□□ 0.55
SEMA6C-210ENST00000621728 CABS1Q96KC9 395 aa18.47■□□□□ 0.55
SEMA6C-210ENST00000621728 PLEKHG4BQ96PX9 1271 aa18.47■□□□□ 0.55
SEMA6C-210ENST00000621728 PAIP2Q9BPZ3 127 aaKnown RBP18.47■□□□□ 0.55
SEMA6C-210ENST00000621728 RIOK2Q9BVS4 552 aaKnown RBP18.47■□□□□ 0.55
SEMA6C-210ENST00000621728 UNKQ9C0B0 810 aaKnown RBP18.47■□□□□ 0.55
SEMA6C-210ENST00000621728 CD93Q9NPY3 652 aa18.47■□□□□ 0.55
SEMA6C-210ENST00000621728 ARHGEF3Q9NR81 526 aa18.47■□□□□ 0.55
SEMA6C-210ENST00000621728 SORCS3Q9UPU3 1222 aa18.47■□□□□ 0.55
SEMA6C-210ENST00000621728 NUMA1Q14980 2115 aa18.47■□□□□ 0.55
SEMA6C-210ENST00000621728 TRBV5-4A0A0C4DH59 114 aa18.47■□□□□ 0.55
SEMA6C-210ENST00000621728 SLC35E2BP0CK96 405 aa18.47■□□□□ 0.55
SEMA6C-210ENST00000621728 C6P13671 934 aa18.47■□□□□ 0.55
SEMA6C-210ENST00000621728 C5AR1P21730 350 aa18.47■□□□□ 0.55
SEMA6C-210ENST00000621728 NFKBIAP25963 317 aa18.47■□□□□ 0.55
SEMA6C-210ENST00000621728 TTPAP49638 278 aa18.47■□□□□ 0.55
SEMA6C-210ENST00000621728 ELP6Q0PNE2 266 aa18.47■□□□□ 0.55
SEMA6C-210ENST00000621728 ITIH4Q14624 930 aa18.47■□□□□ 0.55
SEMA6C-210ENST00000621728 CCDC121Q6ZUS5 278 aa18.47■□□□□ 0.55
SEMA6C-210ENST00000621728 TRMT11Q7Z4G4 463 aaKnown RBP18.47■□□□□ 0.55
SEMA6C-210ENST00000621728 ZNF687Q8N1G0 1237 aa18.47■□□□□ 0.55
SEMA6C-210ENST00000621728 MSANTD3Q96H12 275 aa18.47■□□□□ 0.55
SEMA6C-210ENST00000621728 COQ10AQ96MF6 247 aa18.47■□□□□ 0.55
SEMA6C-210ENST00000621728 BIRC8Q96P09 236 aa18.47■□□□□ 0.55
SEMA6C-210ENST00000621728 FAM111AQ96PZ2 611 aa18.47■□□□□ 0.55
SEMA6C-210ENST00000621728 TCF12Q99081 682 aa18.47■□□□□ 0.55
SEMA6C-210ENST00000621728 C19orf43Q9BQ61 176 aa18.47■□□□□ 0.55
SEMA6C-210ENST00000621728 AARSD1Q9BTE6 412 aaKnown RBP18.47■□□□□ 0.55
SEMA6C-210ENST00000621728 SPATA16Q9BXB7 569 aa18.47■□□□□ 0.55
SEMA6C-210ENST00000621728 FAM83DQ9H4H8 585 aa18.47■□□□□ 0.55
SEMA6C-210ENST00000621728 NKIRAS1Q9NYS0 192 aa18.47■□□□□ 0.55
SEMA6C-210ENST00000621728 CRLS1Q9UJA2 301 aa18.47■□□□□ 0.55
SEMA6C-210ENST00000621728 DOCK9Q9BZ29 2069 aa18.46■□□□□ 0.55
SEMA6C-210ENST00000621728 CHRNB1P11230 501 aa18.46■□□□□ 0.55
SEMA6C-210ENST00000621728 STMN1P16949 149 aa18.46■□□□□ 0.55
SEMA6C-210ENST00000621728 TARSP26639 723 aaKnown RBP18.46■□□□□ 0.55
SEMA6C-210ENST00000621728 RAB10P61026 200 aa18.46■□□□□ 0.55
SEMA6C-210ENST00000621728 ZKSCAN8Q15776 578 aaPredicted RBP18.46■□□□□ 0.55
SEMA6C-210ENST00000621728 TMEM52BQ4KMG9 183 aa18.46■□□□□ 0.55
SEMA6C-210ENST00000621728 CTSL3PQ5NE16 218 aa18.46■□□□□ 0.55
SEMA6C-210ENST00000621728 LVRNQ6Q4G3 990 aa18.46■□□□□ 0.55
SEMA6C-210ENST00000621728 ZNF852Q6ZMS4 543 aa18.46■□□□□ 0.55
SEMA6C-210ENST00000621728 ACMSDQ8TDX5 336 aa18.46■□□□□ 0.55
SEMA6C-210ENST00000621728 GANCQ8TET4 914 aa18.46■□□□□ 0.55
SEMA6C-210ENST00000621728 C2orf42Q9NWW7 574 aa18.46■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms