RNA–Protein interactions for RNA: ENST00000620854.4

NEDD9-216, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 5 BASIC

Gene NEDD9, Length 4,086 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-216ENST00000620854 CCM2LQ9NUG4 571 aaPredicted RBP6.93□□□□□ -1.3
NEDD9-216ENST00000620854 TMEM39AQ9NV64 488 aa6.93□□□□□ -1.3
NEDD9-216ENST00000620854 CMTM6Q9NX76 183 aa6.93□□□□□ -1.3
NEDD9-216ENST00000620854 SMPD3Q9NY59 655 aaPredicted RBP6.93□□□□□ -1.3
NEDD9-216ENST00000620854 TMEM181Q9P2C4 612 aa6.93□□□□□ -1.3
NEDD9-216ENST00000620854 UBR3Q6ZT12 1888 aa6.93□□□□□ -1.3
NEDD9-216ENST00000620854 SMIM35A0A1B0GVV1 85 aa6.93□□□□□ -1.3
NEDD9-216ENST00000620854 RBM47A0AV96 593 aaKnown RBP6.93□□□□□ -1.3
NEDD9-216ENST00000620854 TARM1B6A8C7 271 aa6.93□□□□□ -1.3
NEDD9-216ENST00000620854 LRIG2O94898 1065 aa6.93□□□□□ -1.3
NEDD9-216ENST00000620854 ASGR1P07306 291 aa6.93□□□□□ -1.3
NEDD9-216ENST00000620854 IRF1P10914 325 aa6.93□□□□□ -1.3
NEDD9-216ENST00000620854 BMP2P12643 396 aa6.93□□□□□ -1.3
NEDD9-216ENST00000620854 NOS2P35228 1153 aa6.93□□□□□ -1.3
NEDD9-216ENST00000620854 GGT5P36269 586 aa6.93□□□□□ -1.3
NEDD9-216ENST00000620854 OPRL1P41146 370 aa6.93□□□□□ -1.3
NEDD9-216ENST00000620854 CRYBB1P53674 252 aaPredicted RBP6.93□□□□□ -1.3
NEDD9-216ENST00000620854 HERC3Q15034 1050 aa6.93□□□□□ -1.3
NEDD9-216ENST00000620854 PYCR3Q53H96 274 aa6.93□□□□□ -1.3
NEDD9-216ENST00000620854 PAGE2BQ5JRK9 111 aa6.93□□□□□ -1.3
NEDD9-216ENST00000620854 STRADAQ7RTN6 431 aa6.93□□□□□ -1.3
NEDD9-216ENST00000620854 TFAP2DQ7Z6R9 452 aa6.93□□□□□ -1.3
NEDD9-216ENST00000620854 ITIH5Q86UX2 942 aa6.93□□□□□ -1.3
NEDD9-216ENST00000620854 P3H2Q8IVL5 708 aa6.93□□□□□ -1.3
NEDD9-216ENST00000620854 TNIP2Q8NFZ5 429 aa6.93□□□□□ -1.3
NEDD9-216ENST00000620854 WNT8BQ93098 351 aa6.93□□□□□ -1.3
NEDD9-216ENST00000620854 C19orf60Q96EN9 201 aa6.93□□□□□ -1.3
NEDD9-216ENST00000620854 DEFB118Q96PH6 123 aa6.93□□□□□ -1.3
NEDD9-216ENST00000620854 C9orf16Q9BUW7 83 aa6.93□□□□□ -1.3
NEDD9-216ENST00000620854 TRIM54Q9BYV2 358 aa6.93□□□□□ -1.3
NEDD9-216ENST00000620854 LHPPQ9H008 270 aa6.93□□□□□ -1.3
NEDD9-216ENST00000620854 RNF39Q9H2S5 420 aa6.93□□□□□ -1.3
NEDD9-216ENST00000620854 TBCCD1Q9NVR7 557 aa6.93□□□□□ -1.3
NEDD9-216ENST00000620854 RBM22Q9NW64 420 aaKnown RBP eCLIP6.93□□□□□ -1.33e-8■■■■□ 25.4
NEDD9-216ENST00000620854 TMEM161AQ9NX61 479 aa6.93□□□□□ -1.3
NEDD9-216ENST00000620854 GJD2Q9UKL4 321 aa6.93□□□□□ -1.3
NEDD9-216ENST00000620854 KRBA1A5PL33 1030 aa6.93□□□□□ -1.3
NEDD9-216ENST00000620854 PIP5K1BO14986 540 aa6.93□□□□□ -1.3
NEDD9-216ENST00000620854 AOC2O75106 756 aa6.93□□□□□ -1.3
NEDD9-216ENST00000620854 PRKACGP22612 351 aa6.93□□□□□ -1.3
NEDD9-216ENST00000620854 FSHRP23945 695 aa6.93□□□□□ -1.3
NEDD9-216ENST00000620854 ADSLP30566 484 aaPredicted RBP6.93□□□□□ -1.3
NEDD9-216ENST00000620854 NPY2RP49146 381 aa6.93□□□□□ -1.3
NEDD9-216ENST00000620854 SH3BP2P78314 561 aa6.93□□□□□ -1.3
NEDD9-216ENST00000620854 CCL14Q16627 93 aa6.93□□□□□ -1.3
NEDD9-216ENST00000620854 SLC36A3Q495N2 470 aa6.93□□□□□ -1.3
NEDD9-216ENST00000620854 RNF219Q5W0B1 726 aaPredicted RBP6.93□□□□□ -1.3
NEDD9-216ENST00000620854 PKN3Q6P5Z2 889 aa6.93□□□□□ -1.3
NEDD9-216ENST00000620854 PELI3Q8N2H9 469 aa6.93□□□□□ -1.3
NEDD9-216ENST00000620854 SLAIN1Q8ND83 568 aa6.93□□□□□ -1.3
NEDD9-216ENST00000620854 RDH11Q8TC12 318 aa6.93□□□□□ -1.3
NEDD9-216ENST00000620854 ELMO1Q92556 727 aa6.93□□□□□ -1.3
NEDD9-216ENST00000620854 KCTD14Q9BQ13 255 aaPredicted RBP6.93□□□□□ -1.3
NEDD9-216ENST00000620854 BRD8Q9H0E9 1235 aa6.93□□□□□ -1.3
NEDD9-216ENST00000620854 GBA3Q9H227 469 aa6.93□□□□□ -1.3
NEDD9-216ENST00000620854 PRDM8Q9NQV8 689 aa6.93□□□□□ -1.3
NEDD9-216ENST00000620854 A0A1B0GTL3 188 aa6.92□□□□□ -1.3
NEDD9-216ENST00000620854 MAGEB16A2A368 324 aa6.92□□□□□ -1.3
NEDD9-216ENST00000620854 A6NL46 340 aa6.92□□□□□ -1.3
NEDD9-216ENST00000620854 PRRG1O14668 218 aa6.92□□□□□ -1.3
NEDD9-216ENST00000620854 DCLK1O15075 740 aa6.92□□□□□ -1.3
NEDD9-216ENST00000620854 LSM1O15116 133 aaKnown RBP6.92□□□□□ -1.3
NEDD9-216ENST00000620854 MTSS1O43312 755 aa6.92□□□□□ -1.3
NEDD9-216ENST00000620854 ANXA9O76027 345 aa6.92□□□□□ -1.3
NEDD9-216ENST00000620854 OXSR1O95747 527 aaPredicted RBP6.92□□□□□ -1.3
NEDD9-216ENST00000620854 LDLRP01130 860 aa6.92□□□□□ -1.3
NEDD9-216ENST00000620854 MYF6P23409 242 aa6.92□□□□□ -1.3
NEDD9-216ENST00000620854 JAK1P23458 1154 aa6.92□□□□□ -1.3
NEDD9-216ENST00000620854 AKT1P31749 480 aa6.92□□□□□ -1.3
NEDD9-216ENST00000620854 CLCQ05315 142 aa6.92□□□□□ -1.3
NEDD9-216ENST00000620854 BTG3Q14201 252 aaPredicted RBP6.92□□□□□ -1.3
NEDD9-216ENST00000620854 KRT33BQ14525 404 aa6.92□□□□□ -1.3
NEDD9-216ENST00000620854 MEP1AQ16819 746 aa6.92□□□□□ -1.3
NEDD9-216ENST00000620854 TIGD2Q4W5G0 525 aa6.92□□□□□ -1.3
NEDD9-216ENST00000620854 CYBRD1Q53TN4 286 aa6.92□□□□□ -1.3
NEDD9-216ENST00000620854 ZC3H12BQ5HYM0 836 aaKnown RBP6.92□□□□□ -1.3
NEDD9-216ENST00000620854 C10orf120Q5SQS8 335 aa6.92□□□□□ -1.3
NEDD9-216ENST00000620854 ZNF362Q5T0B9 420 aaPredicted RBP6.92□□□□□ -1.3
NEDD9-216ENST00000620854 CRTC3Q6UUV7 619 aa6.92□□□□□ -1.3
NEDD9-216ENST00000620854 HEATR4Q86WZ0 1026 aa6.92□□□□□ -1.3
NEDD9-216ENST00000620854 ANKFN1Q8N957 763 aa6.92□□□□□ -1.3
NEDD9-216ENST00000620854 Q8N9G6 341 aaPredicted RBP6.92□□□□□ -1.3
NEDD9-216ENST00000620854 TEX37Q96LM6 180 aa6.92□□□□□ -1.3
NEDD9-216ENST00000620854 TEKT5Q96M29 485 aa6.92□□□□□ -1.3
NEDD9-216ENST00000620854 PPM1MQ96MI6 270 aa6.92□□□□□ -1.3
NEDD9-216ENST00000620854 SMAD5Q99717 465 aaKnown RBP6.92□□□□□ -1.3
NEDD9-216ENST00000620854 CHID1Q9BWS9 393 aa6.92□□□□□ -1.3
NEDD9-216ENST00000620854 GPR63Q9BZJ6 419 aa6.92□□□□□ -1.3
NEDD9-216ENST00000620854 MARCH7Q9H992 704 aa6.92□□□□□ -1.3
NEDD9-216ENST00000620854 SMURF2Q9HAU4 748 aa6.92□□□□□ -1.3
NEDD9-216ENST00000620854 NT5MQ9NPB1 228 aa6.92□□□□□ -1.3
NEDD9-216ENST00000620854 ANKRD6Q9Y2G4 727 aa6.92□□□□□ -1.3
NEDD9-216ENST00000620854 DNAJC15Q9Y5T4 150 aa6.92□□□□□ -1.3
NEDD9-216ENST00000620854 C11orf97A0A1B0GVM6 126 aaPredicted RBP6.92□□□□□ -1.3
NEDD9-216ENST00000620854 TREHO43280 583 aa6.92□□□□□ -1.3
NEDD9-216ENST00000620854 ALDH2P05091 517 aa6.92□□□□□ -1.3
NEDD9-216ENST00000620854 ZNF12P17014 697 aa6.92□□□□□ -1.3
NEDD9-216ENST00000620854 SLC6A2P23975 617 aa6.92□□□□□ -1.3
NEDD9-216ENST00000620854 ARNTP27540 789 aa6.92□□□□□ -1.3
NEDD9-216ENST00000620854 IDUAP35475 653 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms