RNA–Protein interactions for RNA: ENST00000620789.4

LITAF-220, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 5 BASIC

Gene LITAF, Length 692 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-220ENST00000620789 PTPRCAPQ14761 206 aa18.14■□□□□ 0.49
LITAF-220ENST00000620789 KCTD19Q17RG1 926 aaPredicted RBP18.14■□□□□ 0.49
LITAF-220ENST00000620789 HS1BP3Q53T59 392 aa18.14■□□□□ 0.49
LITAF-220ENST00000620789 DNAAF3Q8N9W5 541 aa18.14■□□□□ 0.49
LITAF-220ENST00000620789 OR4K2Q8NGD2 314 aa18.14■□□□□ 0.49
LITAF-220ENST00000620789 PTCD2Q8WV60 388 aaKnown RBP18.14■□□□□ 0.49
LITAF-220ENST00000620789 GLYATL1Q969I3 302 aa18.14■□□□□ 0.49
LITAF-220ENST00000620789 SCARF2Q96GP6 870 aaPredicted RBP18.14■□□□□ 0.49
LITAF-220ENST00000620789 CNDP2Q96KP4 475 aaKnown RBP18.14■□□□□ 0.49
LITAF-220ENST00000620789 VPS35Q96QK1 796 aa18.14■□□□□ 0.49
LITAF-220ENST00000620789 C19orf43Q9BQ61 176 aa18.14■□□□□ 0.49
LITAF-220ENST00000620789 DUSP23Q9BVJ7 150 aa18.14■□□□□ 0.49
LITAF-220ENST00000620789 VPS18Q9P253 973 aa18.14■□□□□ 0.49
LITAF-220ENST00000620789 SUFUQ9UMX1 484 aa18.14■□□□□ 0.49
LITAF-220ENST00000620789 OAS3Q9Y6K5 1087 aaKnown RBP18.14■□□□□ 0.49
LITAF-220ENST00000620789 PCNX2A6NKB5 2137 aa18.14■□□□□ 0.49
LITAF-220ENST00000620789 ZNF106Q9H2Y7 1883 aaKnown RBP18.14■□□□□ 0.49
LITAF-220ENST00000620789 MYLKQ15746 1914 aa18.13■□□□□ 0.49
LITAF-220ENST00000620789 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP18.13■□□□□ 0.49
LITAF-220ENST00000620789 GAPDHSO14556 408 aaPredicted RBP18.13■□□□□ 0.49
LITAF-220ENST00000620789 TPP1O14773 563 aa18.13■□□□□ 0.49
LITAF-220ENST00000620789 TNFSF14O43557 240 aa18.13■□□□□ 0.49
LITAF-220ENST00000620789 SLC25A14O95258 325 aaPredicted RBP18.13■□□□□ 0.49
LITAF-220ENST00000620789 ASMTLO95671 621 aa18.13■□□□□ 0.49
LITAF-220ENST00000620789 LDOC1O95751 146 aaPredicted RBP18.13■□□□□ 0.49
LITAF-220ENST00000620789 GAS8O95995 478 aa18.13■□□□□ 0.49
LITAF-220ENST00000620789 CELA2BP08218 269 aaPredicted RBP18.13■□□□□ 0.49
LITAF-220ENST00000620789 GRIA1P42261 906 aa18.13■□□□□ 0.49
LITAF-220ENST00000620789 VPS41P49754 854 aa18.13■□□□□ 0.49
LITAF-220ENST00000620789 ZNF140P52738 457 aaPredicted RBP18.13■□□□□ 0.49
LITAF-220ENST00000620789 GPS1Q13098 491 aa18.13■□□□□ 0.49
LITAF-220ENST00000620789 POU6F1Q14863 301 aa18.13■□□□□ 0.49
LITAF-220ENST00000620789 DEFB133Q30KQ1 61 aa18.13■□□□□ 0.49
LITAF-220ENST00000620789 PROX2Q3B8N5 592 aa18.13■□□□□ 0.49
LITAF-220ENST00000620789 ATP13A5Q4VNC0 1218 aa18.13■□□□□ 0.49
LITAF-220ENST00000620789 FAM151BQ6UXP7 276 aa18.13■□□□□ 0.49
LITAF-220ENST00000620789 SYT10Q6XYQ8 523 aa18.13■□□□□ 0.49
LITAF-220ENST00000620789 ERMP1Q7Z2K6 904 aa18.13■□□□□ 0.49
LITAF-220ENST00000620789 PHYKPLQ8IUZ5 450 aa18.13■□□□□ 0.49
LITAF-220ENST00000620789 SDR16C5Q8N3Y7 309 aa18.13■□□□□ 0.49
LITAF-220ENST00000620789 OR13C4Q8NGS5 318 aa18.13■□□□□ 0.49
LITAF-220ENST00000620789 TMEM168Q9H0V1 697 aa18.13■□□□□ 0.49
LITAF-220ENST00000620789 CASS4Q9NQ75 786 aa18.13■□□□□ 0.49
LITAF-220ENST00000620789 RNF14Q9UBS8 474 aa18.13■□□□□ 0.49
LITAF-220ENST00000620789 NEU2Q9Y3R4 380 aa18.13■□□□□ 0.49
LITAF-220ENST00000620789 ARID1BQ8NFD5 2236 aaPredicted RBP18.13■□□□□ 0.49
LITAF-220ENST00000620789 YY2O15391 372 aa18.12■□□□□ 0.49
LITAF-220ENST00000620789 ECEL1O95672 775 aa18.12■□□□□ 0.49
LITAF-220ENST00000620789 ANXA6P08133 673 aa18.12■□□□□ 0.49
LITAF-220ENST00000620789 TPSB2P20231 275 aa18.12■□□□□ 0.49
LITAF-220ENST00000620789 HADHAP40939 763 aa18.12■□□□□ 0.49
LITAF-220ENST00000620789 PAFAH1B1P43034 410 aa18.12■□□□□ 0.49
LITAF-220ENST00000620789 GNPDA1P46926 289 aa18.12■□□□□ 0.49
LITAF-220ENST00000620789 ITGA9Q13797 1035 aa18.12■□□□□ 0.49
LITAF-220ENST00000620789 SEPT6Q14141 434 aa18.12■□□□□ 0.49
LITAF-220ENST00000620789 TCEA2Q15560 299 aa18.12■□□□□ 0.49
LITAF-220ENST00000620789 TPSAB1Q15661 275 aa18.12■□□□□ 0.49
LITAF-220ENST00000620789 CHRNA6Q15825 494 aa18.12■□□□□ 0.49
LITAF-220ENST00000620789 CERCAMQ5T4B2 595 aa18.12■□□□□ 0.49
LITAF-220ENST00000620789 ZCCHC8Q6NZY4 707 aaKnown RBP18.12■□□□□ 0.49
LITAF-220ENST00000620789 MARK2Q7KZI7 788 aaKnown RBP18.12■□□□□ 0.49
LITAF-220ENST00000620789 GKN2Q86XP6 184 aa18.12■□□□□ 0.49
LITAF-220ENST00000620789 DDX47Q9H0S4 455 aaKnown RBP18.12■□□□□ 0.49
LITAF-220ENST00000620789 SUDS3Q9H7L9 328 aaPredicted RBP18.12■□□□□ 0.49
LITAF-220ENST00000620789 TRNAU1APQ9NX07 287 aaKnown RBP18.12■□□□□ 0.49
LITAF-220ENST00000620789 FKBPLQ9UIM3 349 aa18.12■□□□□ 0.49
LITAF-220ENST00000620789 APPL1Q9UKG1 709 aa18.12■□□□□ 0.49
LITAF-220ENST00000620789 TMPRSS11EQ9UL52 423 aa18.12■□□□□ 0.49
LITAF-220ENST00000620789 DOLKQ9UPQ8 538 aa18.12■□□□□ 0.49
LITAF-220ENST00000620789 DNAJC6O75061 913 aa18.11■□□□□ 0.49
LITAF-220ENST00000620789 PRAMEF1O95521 474 aa18.11■□□□□ 0.49
LITAF-220ENST00000620789 CDK16Q00536 496 aa18.11■□□□□ 0.49
LITAF-220ENST00000620789 N4BP2L1Q5TBK1 243 aaPredicted RBP18.11■□□□□ 0.49
LITAF-220ENST00000620789 LVRNQ6Q4G3 990 aa18.11■□□□□ 0.49
LITAF-220ENST00000620789 FAM181AQ8N9Y4 354 aa18.11■□□□□ 0.49
LITAF-220ENST00000620789 SLCO2A1Q92959 643 aa18.11■□□□□ 0.49
LITAF-220ENST00000620789 TRIM44Q96DX7 344 aaPredicted RBP18.11■□□□□ 0.49
LITAF-220ENST00000620789 RMI1Q9H9A7 625 aa18.11■□□□□ 0.49
LITAF-220ENST00000620789 TRIM39Q9HCM9 518 aa18.11■□□□□ 0.49
LITAF-220ENST00000620789 ARFGAP3Q9NP61 516 aa18.11■□□□□ 0.49
LITAF-220ENST00000620789 NLE1Q9NVX2 485 aaPredicted RBP18.11■□□□□ 0.49
LITAF-220ENST00000620789 TOR4AQ9NXH8 423 aa18.11■□□□□ 0.49
LITAF-220ENST00000620789 EIF2AK3Q9NZJ5 1116 aaKnown RBP18.11■□□□□ 0.49
LITAF-220ENST00000620789 ATXN10Q9UBB4 475 aa18.11■□□□□ 0.49
LITAF-220ENST00000620789 PCYOX1Q9UHG3 505 aa18.11■□□□□ 0.49
LITAF-220ENST00000620789 HEATR9A2RTY3 570 aa18.1■□□□□ 0.49
LITAF-220ENST00000620789 MROH6A6NGR9 719 aa18.1■□□□□ 0.49
LITAF-220ENST00000620789 AP3B1O00203 1094 aa18.1■□□□□ 0.49
LITAF-220ENST00000620789 GPR39O43194 453 aa18.1■□□□□ 0.49
LITAF-220ENST00000620789 UGT1A9O60656 530 aa18.1■□□□□ 0.49
LITAF-220ENST00000620789 SRP72O76094 671 aaKnown RBP18.1■□□□□ 0.49
LITAF-220ENST00000620789 FTH1P19P0C7X4 201 aa18.1■□□□□ 0.49
LITAF-220ENST00000620789 UGT1A6P19224 532 aa18.1■□□□□ 0.49
LITAF-220ENST00000620789 UGT1A1P22309 533 aa18.1■□□□□ 0.49
LITAF-220ENST00000620789 UGT1A4P22310 534 aa18.1■□□□□ 0.49
LITAF-220ENST00000620789 UGT1A3P35503 534 aa18.1■□□□□ 0.49
LITAF-220ENST00000620789 UGT1A5P35504 534 aa18.1■□□□□ 0.49
LITAF-220ENST00000620789 ADCY8P40145 1251 aa18.1■□□□□ 0.49
LITAF-220ENST00000620789 MAGEA6P43360 314 aa18.1■□□□□ 0.49
LITAF-220ENST00000620789 TMPRSS15P98073 1019 aa18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms