RNA–Protein interactions for RNA: ENST00000618217.4

CBWD3-213, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene CBWD3, Length 1,611 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-213ENST00000618217 FBXO36Q8NEA4 188 aa22.52■■□□□ 1.2
CBWD3-213ENST00000618217 ZNF398Q8TD17 642 aa22.52■■□□□ 1.2
CBWD3-213ENST00000618217 RUBCNQ92622 972 aa22.52■■□□□ 1.2
CBWD3-213ENST00000618217 FUBP1Q96AE4 644 aaKnown RBP22.52■■□□□ 1.2
CBWD3-213ENST00000618217 LGR4Q9BXB1 951 aa22.52■■□□□ 1.2
CBWD3-213ENST00000618217 UGT1A7Q9HAW7 530 aa22.52■■□□□ 1.2
CBWD3-213ENST00000618217 UGT1A10Q9HAW8 530 aa22.52■■□□□ 1.2
CBWD3-213ENST00000618217 UGT1A8Q9HAW9 530 aa22.52■■□□□ 1.2
CBWD3-213ENST00000618217 SUSD2Q9UGT4 822 aa22.52■■□□□ 1.2
CBWD3-213ENST00000618217 FAM169AQ9Y6X4 670 aa22.52■■□□□ 1.2
CBWD3-213ENST00000618217 RALGAPA1Q6GYQ0 2036 aa22.52■■□□□ 1.2
CBWD3-213ENST00000618217 TP53BP1Q12888 1972 aaPredicted RBP22.52■■□□□ 1.19
CBWD3-213ENST00000618217 OTOGLQ3ZCN5 2332 aa22.51■■□□□ 1.19
CBWD3-213ENST00000618217 OR51F1A6NGY5 319 aa22.51■■□□□ 1.19
CBWD3-213ENST00000618217 PRR5-ARHGAP8B1AHC4 643 aa22.51■■□□□ 1.19
CBWD3-213ENST00000618217 VILLO15195 856 aa22.51■■□□□ 1.19
CBWD3-213ENST00000618217 POLBP06746 335 aa22.51■■□□□ 1.19
CBWD3-213ENST00000618217 GNSP15586 552 aa22.51■■□□□ 1.19
CBWD3-213ENST00000618217 TNFRSF8P28908 595 aa22.51■■□□□ 1.19
CBWD3-213ENST00000618217 MC4RP32245 332 aa22.51■■□□□ 1.19
CBWD3-213ENST00000618217 CSNK1EP49674 416 aaKnown RBP22.51■■□□□ 1.19
CBWD3-213ENST00000618217 OVGP1Q12889 678 aa22.51■■□□□ 1.19
CBWD3-213ENST00000618217 NFATC2Q13469 925 aa22.51■■□□□ 1.19
CBWD3-213ENST00000618217 KIAA0930Q6ICG6 404 aaPredicted RBP22.51■■□□□ 1.19
CBWD3-213ENST00000618217 SLC22A18ASQ8N1D0 253 aa22.51■■□□□ 1.19
CBWD3-213ENST00000618217 ZNF669Q96BR6 464 aaPredicted RBP22.51■■□□□ 1.19
CBWD3-213ENST00000618217 COX14Q96I36 57 aa22.51■■□□□ 1.19
CBWD3-213ENST00000618217 VPS35Q96QK1 796 aa22.51■■□□□ 1.19
CBWD3-213ENST00000618217 FMO2Q99518 471 aa22.51■■□□□ 1.19
CBWD3-213ENST00000618217 WDR26Q9H7D7 661 aa22.51■■□□□ 1.19
CBWD3-213ENST00000618217 SMOXQ9NWM0 555 aa22.51■■□□□ 1.19
CBWD3-213ENST00000618217 MTRF1LQ9UGC7 380 aaKnown RBP22.51■■□□□ 1.19
CBWD3-213ENST00000618217 ZC3H7BQ9UGR2 993 aaKnown RBP22.51■■□□□ 1.19
CBWD3-213ENST00000618217 TRBV5-4A0A0C4DH59 114 aa22.5■■□□□ 1.19
CBWD3-213ENST00000618217 PROB1E7EW31 1015 aa22.5■■□□□ 1.19
CBWD3-213ENST00000618217 VAPBO95292 243 aa22.5■■□□□ 1.19
CBWD3-213ENST00000618217 TTC4O95801 387 aa22.5■■□□□ 1.19
CBWD3-213ENST00000618217 FOXN2P32314 431 aa22.5■■□□□ 1.19
CBWD3-213ENST00000618217 RABIFP47224 123 aa22.5■■□□□ 1.19
CBWD3-213ENST00000618217 CDK3Q00526 305 aa22.5■■□□□ 1.19
CBWD3-213ENST00000618217 ITGA9Q13797 1035 aa22.5■■□□□ 1.19
CBWD3-213ENST00000618217 CRYMQ14894 314 aa22.5■■□□□ 1.19
CBWD3-213ENST00000618217 PLA2G2CQ5R387 149 aa22.5■■□□□ 1.19
CBWD3-213ENST00000618217 UNC5AQ6ZN44 842 aa22.5■■□□□ 1.19
CBWD3-213ENST00000618217 CCDC25Q86WR0 208 aa22.5■■□□□ 1.19
CBWD3-213ENST00000618217 RELL1Q8IUW5 271 aa22.5■■□□□ 1.19
CBWD3-213ENST00000618217 BTN2A2Q8WVV5 523 aa22.5■■□□□ 1.19
CBWD3-213ENST00000618217 GLYATL1Q969I3 302 aa22.5■■□□□ 1.19
CBWD3-213ENST00000618217 KLHDC7BQ96G42 594 aa22.5■■□□□ 1.19
CBWD3-213ENST00000618217 HIC2Q96JB3 615 aa22.5■■□□□ 1.19
CBWD3-213ENST00000618217 ARRDC1-AS1Q9H2J1 176 aa22.5■■□□□ 1.19
CBWD3-213ENST00000618217 LAMA1P25391 3075 aa22.5■■□□□ 1.19
CBWD3-213ENST00000618217 TLR4O00206 839 aa22.49■■□□□ 1.19
CBWD3-213ENST00000618217 GOT2P00505 430 aaKnown RBP22.49■■□□□ 1.19
CBWD3-213ENST00000618217 RETP07949 1114 aa22.49■■□□□ 1.19
CBWD3-213ENST00000618217 THEGLP0DJG4 465 aa22.49■■□□□ 1.19
CBWD3-213ENST00000618217 MYBL2P10244 700 aa22.49■■□□□ 1.19
CBWD3-213ENST00000618217 MAGEA4P43358 317 aa22.49■■□□□ 1.19
CBWD3-213ENST00000618217 CDKN1CP49918 316 aaPredicted RBP22.49■■□□□ 1.19
CBWD3-213ENST00000618217 BNC1Q01954 994 aa22.49■■□□□ 1.19
CBWD3-213ENST00000618217 DUOXA1Q1HG43 343 aa22.49■■□□□ 1.19
CBWD3-213ENST00000618217 GPR33Q49SQ1 333 aa22.49■■□□□ 1.19
CBWD3-213ENST00000618217 AFTPHQ6ULP2 937 aa22.49■■□□□ 1.19
CBWD3-213ENST00000618217 SNX20Q7Z614 316 aa22.49■■□□□ 1.19
CBWD3-213ENST00000618217 PTAR1Q7Z6K3 402 aaPredicted RBP22.49■■□□□ 1.19
CBWD3-213ENST00000618217 PIANPQ8IYJ0 282 aa22.49■■□□□ 1.19
CBWD3-213ENST00000618217 OR6P1Q8NGX9 317 aa22.49■■□□□ 1.19
CBWD3-213ENST00000618217 OR4L1Q8NH43 312 aa22.49■■□□□ 1.19
CBWD3-213ENST00000618217 TSPYL1Q9H0U9 437 aa22.49■■□□□ 1.19
CBWD3-213ENST00000618217 ASB8Q9H765 288 aa22.49■■□□□ 1.19
CBWD3-213ENST00000618217 INPP4BO15327 924 aa22.49■■□□□ 1.19
CBWD3-213ENST00000618217 PRSS56P0CW18 603 aa22.49■■□□□ 1.19
CBWD3-213ENST00000618217 MYCLP1P12525 358 aaPredicted RBP22.49■■□□□ 1.19
CBWD3-213ENST00000618217 MPLP40238 635 aa22.49■■□□□ 1.19
CBWD3-213ENST00000618217 KIAA1024LP59773 190 aa22.49■■□□□ 1.19
CBWD3-213ENST00000618217 PRAMEP78395 509 aa22.49■■□□□ 1.19
CBWD3-213ENST00000618217 CACNG1Q06432 222 aa22.49■■□□□ 1.19
CBWD3-213ENST00000618217 SPANXN3Q5MJ09 141 aa22.49■■□□□ 1.19
CBWD3-213ENST00000618217 CCNI2Q6ZMN8 369 aaPredicted RBP22.49■■□□□ 1.19
CBWD3-213ENST00000618217 SPATS2Q86XZ4 545 aaKnown RBP22.49■■□□□ 1.19
CBWD3-213ENST00000618217 CEP76Q8TAP6 659 aa22.49■■□□□ 1.19
CBWD3-213ENST00000618217 PYROXD1Q8WU10 500 aa22.49■■□□□ 1.19
CBWD3-213ENST00000618217 FAM96AQ9H5X1 160 aa22.49■■□□□ 1.19
CBWD3-213ENST00000618217 CAPN10Q9HC96 672 aa22.49■■□□□ 1.19
CBWD3-213ENST00000618217 PHPT1Q9NRX4 125 aaPredicted RBP22.49■■□□□ 1.19
CBWD3-213ENST00000618217 SLC30A1Q9Y6M5 507 aa22.49■■□□□ 1.19
CBWD3-213ENST00000618217 PCDH15Q96QU1 1955 aa22.48■■□□□ 1.19
CBWD3-213ENST00000618217 PATE3B3GLJ2 98 aa22.48■■□□□ 1.19
CBWD3-213ENST00000618217 LMNAP02545 664 aaKnown RBP22.48■■□□□ 1.19
CBWD3-213ENST00000618217 ITGALP20701 1170 aa22.48■■□□□ 1.19
CBWD3-213ENST00000618217 NAA30Q147X3 362 aaPredicted RBP22.48■■□□□ 1.19
CBWD3-213ENST00000618217 NFATC4Q14934 902 aa22.48■■□□□ 1.19
CBWD3-213ENST00000618217 PSAPL1Q6NUJ1 521 aa22.48■■□□□ 1.19
CBWD3-213ENST00000618217 SLC23A3Q6PIS1 610 aa22.48■■□□□ 1.19
CBWD3-213ENST00000618217 RABEPKQ7Z6M1 372 aa22.48■■□□□ 1.19
CBWD3-213ENST00000618217 DCP2Q8IU60 420 aaKnown RBP22.48■■□□□ 1.19
CBWD3-213ENST00000618217 UNC5BQ8IZJ1 945 aa22.48■■□□□ 1.19
CBWD3-213ENST00000618217 SERBP1Q8NC51 408 aaKnown RBP eCLIP22.48■■□□□ 1.19
CBWD3-213ENST00000618217 CFAP36Q96G28 342 aa22.48■■□□□ 1.19
CBWD3-213ENST00000618217 MARCH4Q9P2E8 410 aaPredicted RBP22.48■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms