RNA–Protein interactions for RNA: ENST00000612558.4

CCDC47-207, Transcript of coiled-coil domain containing 47, humanhuman

TSL 5 BASIC

Gene CCDC47, Length 1,586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-207ENST00000612558 KPNA2P52292 529 aaKnown RBP8.87□□□□□ -0.99
CCDC47-207ENST00000612558 CDKN2DP55273 166 aa8.87□□□□□ -0.99
CCDC47-207ENST00000612558 MESP2Q0VG99 397 aa8.87□□□□□ -0.99
CCDC47-207ENST00000612558 ZNF460Q14592 562 aa8.87□□□□□ -0.99
CCDC47-207ENST00000612558 ITIH4Q14624 930 aa8.87□□□□□ -0.99
CCDC47-207ENST00000612558 COL19A1Q14993 1142 aa8.87□□□□□ -0.99
CCDC47-207ENST00000612558 CHI3L2Q15782 390 aa8.87□□□□□ -0.99
CCDC47-207ENST00000612558 TUSC1Q2TAM9 212 aa8.87□□□□□ -0.99
CCDC47-207ENST00000612558 LRIT3Q3SXY7 679 aa8.87□□□□□ -0.99
CCDC47-207ENST00000612558 PSAPL1Q6NUJ1 521 aa8.87□□□□□ -0.99
CCDC47-207ENST00000612558 ZNF549Q6P9A3 640 aa8.87□□□□□ -0.99
CCDC47-207ENST00000612558 MTSS1LQ765P7 747 aa8.87□□□□□ -0.99
CCDC47-207ENST00000612558 SPATA21Q7Z572 469 aa8.87□□□□□ -0.99
CCDC47-207ENST00000612558 PIANPQ8IYJ0 282 aa8.87□□□□□ -0.99
CCDC47-207ENST00000612558 CENPLQ8N0S6 344 aaPredicted RBP8.87□□□□□ -0.99
CCDC47-207ENST00000612558 STK40Q8N2I9 435 aa8.87□□□□□ -0.99
CCDC47-207ENST00000612558 PHTF2Q8N3S3 785 aa8.87□□□□□ -0.99
CCDC47-207ENST00000612558 SVOPQ8N4V2 548 aa8.87□□□□□ -0.99
CCDC47-207ENST00000612558 TERB1Q8NA31 727 aa8.87□□□□□ -0.99
CCDC47-207ENST00000612558 RDH11Q8TC12 318 aa8.87□□□□□ -0.99
CCDC47-207ENST00000612558 GRIN3AQ8TCU5 1115 aa8.87□□□□□ -0.99
CCDC47-207ENST00000612558 UCMAQ8WVF2 138 aa8.87□□□□□ -0.99
CCDC47-207ENST00000612558 KCTD4Q8WVF5 259 aa8.87□□□□□ -0.99
CCDC47-207ENST00000612558 LPGAT1Q92604 370 aa8.87□□□□□ -0.99
CCDC47-207ENST00000612558 FGF14Q92915 247 aa8.87□□□□□ -0.99
CCDC47-207ENST00000612558 TBRG4Q969Z0 631 aaKnown RBP eCLIP8.87□□□□□ -0.99
CCDC47-207ENST00000612558 MSLNLQ96KJ4 702 aa8.87□□□□□ -0.99
CCDC47-207ENST00000612558 TTC1Q99614 292 aa8.87□□□□□ -0.99
CCDC47-207ENST00000612558 AARSD1Q9BTE6 412 aaKnown RBP8.87□□□□□ -0.99
CCDC47-207ENST00000612558 TRMT61BQ9BVS5 477 aaKnown RBP8.87□□□□□ -0.99
CCDC47-207ENST00000612558 TSSK1BQ9BXA7 367 aa8.87□□□□□ -0.99
CCDC47-207ENST00000612558 COL25A1Q9BXS0 654 aaPredicted RBP8.87□□□□□ -0.99
CCDC47-207ENST00000612558 CCDC68Q9H2F9 335 aa8.87□□□□□ -0.99
CCDC47-207ENST00000612558 POMKQ9H5K3 350 aa8.87□□□□□ -0.99
CCDC47-207ENST00000612558 POPDC3Q9HBV1 291 aa8.87□□□□□ -0.99
CCDC47-207ENST00000612558 GPAMQ9HCL2 828 aa8.87□□□□□ -0.99
CCDC47-207ENST00000612558 GTSE1Q9NYZ3 720 aa8.87□□□□□ -0.99
CCDC47-207ENST00000612558 DKK3Q9UBP4 350 aa8.87□□□□□ -0.99
CCDC47-207ENST00000612558 CDV3Q9UKY7 258 aaKnown RBP8.87□□□□□ -0.99
CCDC47-207ENST00000612558 USP15Q9Y4E8 981 aaPredicted RBP8.87□□□□□ -0.99
CCDC47-207ENST00000612558 EDDM13A0A1B0GTR0 161 aa8.86□□□□□ -0.99
CCDC47-207ENST00000612558 UBA6A0AVT1 1052 aaPredicted RBP8.86□□□□□ -0.99
CCDC47-207ENST00000612558 SRP72O76094 671 aaKnown RBP8.86□□□□□ -0.99
CCDC47-207ENST00000612558 IGHA1P01876 353 aa8.86□□□□□ -0.99
CCDC47-207ENST00000612558 LTA4HP09960 611 aaKnown RBP8.86□□□□□ -0.99
CCDC47-207ENST00000612558 CYP2A6P11509 494 aaPredicted RBP8.86□□□□□ -0.99
CCDC47-207ENST00000612558 BPIP17213 487 aa8.86□□□□□ -0.99
CCDC47-207ENST00000612558 ITGALP20701 1170 aa8.86□□□□□ -0.99
CCDC47-207ENST00000612558 FDXRP22570 491 aa8.86□□□□□ -0.99
CCDC47-207ENST00000612558 SP100P23497 879 aaPredicted RBP8.86□□□□□ -0.99
CCDC47-207ENST00000612558 ALDH3A1P30838 453 aa8.86□□□□□ -0.99
CCDC47-207ENST00000612558 SPAM1P38567 509 aa8.86□□□□□ -0.99
CCDC47-207ENST00000612558 PTGER3P43115 390 aa8.86□□□□□ -0.99
CCDC47-207ENST00000612558 CDKN1CP49918 316 aaPredicted RBP8.86□□□□□ -0.99
CCDC47-207ENST00000612558 SUOXP51687 545 aa8.86□□□□□ -0.99
CCDC47-207ENST00000612558 PGGT1BP53609 377 aa8.86□□□□□ -0.99
CCDC47-207ENST00000612558 ADARP55265 1226 aaKnown RBP8.86□□□□□ -0.99
CCDC47-207ENST00000612558 KDSRQ06136 332 aa8.86□□□□□ -0.99
CCDC47-207ENST00000612558 STX3Q13277 289 aa8.86□□□□□ -0.99
CCDC47-207ENST00000612558 PCLAFQ15004 111 aa8.86□□□□□ -0.99
CCDC47-207ENST00000612558 FAM83EQ2M2I3 478 aa8.86□□□□□ -0.99
CCDC47-207ENST00000612558 HNRNPA1L2Q32P51 320 aaKnown RBP8.86□□□□□ -0.99
CCDC47-207ENST00000612558 ITPRIPL2Q3MIP1 535 aa8.86□□□□□ -0.99
CCDC47-207ENST00000612558 FNDC3BQ53EP0 1204 aaKnown RBP8.86□□□□□ -0.99
CCDC47-207ENST00000612558 ZNF805Q5CZA5 627 aa8.86□□□□□ -0.99
CCDC47-207ENST00000612558 AGAP9Q5VTM2 703 aa8.86□□□□□ -0.99
CCDC47-207ENST00000612558 LYPLAL1Q5VWZ2 237 aa8.86□□□□□ -0.99
CCDC47-207ENST00000612558 ZDHHC20Q5W0Z9 365 aa8.86□□□□□ -0.99
CCDC47-207ENST00000612558 LRRC66Q68CR7 880 aa8.86□□□□□ -0.99
CCDC47-207ENST00000612558 CGB2Q6NT52 195 aa8.86□□□□□ -0.99
CCDC47-207ENST00000612558 KLC3Q6P597 504 aa8.86□□□□□ -0.99
CCDC47-207ENST00000612558 TAS2R42Q7RTR8 314 aa8.86□□□□□ -0.99
CCDC47-207ENST00000612558 OTOAQ7RTW8 1153 aa8.86□□□□□ -0.99
CCDC47-207ENST00000612558 SNX20Q7Z614 316 aa8.86□□□□□ -0.99
CCDC47-207ENST00000612558 TSPAN33Q86UF1 283 aa8.86□□□□□ -0.99
CCDC47-207ENST00000612558 PARP9Q8IXQ6 854 aa8.86□□□□□ -0.99
CCDC47-207ENST00000612558 FSTL5Q8N475 847 aaPredicted RBP8.86□□□□□ -0.99
CCDC47-207ENST00000612558 SMRP1Q8NCR6 262 aa8.86□□□□□ -0.99
CCDC47-207ENST00000612558 PPP1R14CQ8TAE6 165 aa8.86□□□□□ -0.99
CCDC47-207ENST00000612558 SREK1Q8WXA9 508 aaKnown RBP8.86□□□□□ -0.99
CCDC47-207ENST00000612558 NXNL1Q96CM4 212 aa8.86□□□□□ -0.99
CCDC47-207ENST00000612558 SCYL1Q96KG9 808 aa8.86□□□□□ -0.99
CCDC47-207ENST00000612558 UBXN10Q96LJ8 280 aa8.86□□□□□ -0.99
CCDC47-207ENST00000612558 GPR78Q96P69 363 aa8.86□□□□□ -0.99
CCDC47-207ENST00000612558 MRPL57Q9BQC6 102 aaKnown RBP8.86□□□□□ -0.99
CCDC47-207ENST00000612558 PLCD4Q9BRC7 762 aa8.86□□□□□ -0.99
CCDC47-207ENST00000612558 FAM96AQ9H5X1 160 aa8.86□□□□□ -0.99
CCDC47-207ENST00000612558 IL26Q9NPH9 171 aa8.86□□□□□ -0.99
CCDC47-207ENST00000612558 THAP1Q9NVV9 213 aa8.86□□□□□ -0.99
CCDC47-207ENST00000612558 EPS15L1Q9UBC2 864 aa8.86□□□□□ -0.99
CCDC47-207ENST00000612558 FNDC3AQ9Y2H6 1198 aaKnown RBP8.86□□□□□ -0.99
CCDC47-207ENST00000612558 COMMD10Q9Y6G5 202 aa8.86□□□□□ -0.99
CCDC47-207ENST00000612558 GLYATL1P3A0A0U1RQE8 302 aa8.86□□□□□ -0.99
CCDC47-207ENST00000612558 FIGNL2A6NMB9 653 aa8.86□□□□□ -0.99
CCDC47-207ENST00000612558 A8MX80 341 aa8.86□□□□□ -0.99
CCDC47-207ENST00000612558 UPK3BL1B0FP48 263 aa8.86□□□□□ -0.99
CCDC47-207ENST00000612558 UPK3BL2E5RIL1 263 aa8.86□□□□□ -0.99
CCDC47-207ENST00000612558 G3V2L1 256 aa8.86□□□□□ -0.99
CCDC47-207ENST00000612558 GAPDHSO14556 408 aaPredicted RBP8.86□□□□□ -0.99
CCDC47-207ENST00000612558 DNAJC6O75061 913 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms