RNA–Protein interactions for RNA: ENST00000612404.4

SREK1-216, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 1 (best) BASIC

Gene SREK1, Length 2,128 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-216ENST00000612404 ADPRHP54922 357 aa17.44■□□□□ 0.38
SREK1-216ENST00000612404 ITGA9Q13797 1035 aa17.44■□□□□ 0.38
SREK1-216ENST00000612404 GPR33Q49SQ1 333 aa17.44■□□□□ 0.38
SREK1-216ENST00000612404 RNF187Q5TA31 235 aaPredicted RBP17.44■□□□□ 0.38
SREK1-216ENST00000612404 USP30Q70CQ3 517 aa17.44■□□□□ 0.38
SREK1-216ENST00000612404 C4orf33Q8N1A6 199 aa17.44■□□□□ 0.38
SREK1-216ENST00000612404 ACVR1CQ8NER5 493 aa17.44■□□□□ 0.38
SREK1-216ENST00000612404 TSTD1Q8NFU3 115 aa17.44■□□□□ 0.38
SREK1-216ENST00000612404 SERAC1Q96JX3 654 aa17.44■□□□□ 0.38
SREK1-216ENST00000612404 HHIPQ96QV1 700 aa17.44■□□□□ 0.38
SREK1-216ENST00000612404 TTC1Q99614 292 aa17.44■□□□□ 0.38
SREK1-216ENST00000612404 OSBPL6Q9BZF3 934 aa17.44■□□□□ 0.38
SREK1-216ENST00000612404 FZD4Q9ULV1 537 aa17.44■□□□□ 0.38
SREK1-216ENST00000612404 SIT1Q9Y3P8 196 aa17.44■□□□□ 0.38
SREK1-216ENST00000612404 FAM95CA0A1B0GW59 222 aa17.43■□□□□ 0.38
SREK1-216ENST00000612404 KRT4P19013 534 aa17.43■□□□□ 0.38
SREK1-216ENST00000612404 CA5AP35218 305 aa17.43■□□□□ 0.38
SREK1-216ENST00000612404 PPARGP37231 505 aaPredicted RBP17.43■□□□□ 0.38
SREK1-216ENST00000612404 TPMTP51580 245 aa17.43■□□□□ 0.38
SREK1-216ENST00000612404 CERS6Q6ZMG9 384 aa17.43■□□□□ 0.38
SREK1-216ENST00000612404 FAM131CQ96AQ9 280 aa17.43■□□□□ 0.38
SREK1-216ENST00000612404 ELMO2Q96JJ3 720 aa17.43■□□□□ 0.38
SREK1-216ENST00000612404 SMC6Q96SB8 1091 aa17.43■□□□□ 0.38
SREK1-216ENST00000612404 NDNQ99608 321 aa17.43■□□□□ 0.38
SREK1-216ENST00000612404 GPR22Q99680 433 aa17.43■□□□□ 0.38
SREK1-216ENST00000612404 CAB39LQ9H9S4 337 aa17.43■□□□□ 0.38
SREK1-216ENST00000612404 VPS9D1Q9Y2B5 631 aa17.43■□□□□ 0.38
SREK1-216ENST00000612404 TRPM6Q9BX84 2022 aa17.43■□□□□ 0.38
SREK1-216ENST00000612404 TBC1D3DA0A087WVF3 549 aa17.42■□□□□ 0.38
SREK1-216ENST00000612404 TBC1D3IA0A087WXS9 549 aa17.42■□□□□ 0.38
SREK1-216ENST00000612404 TBC1D3EA0A087X179 549 aa17.42■□□□□ 0.38
SREK1-216ENST00000612404 TBC1D3KA0A087X1G2 549 aa17.42■□□□□ 0.38
SREK1-216ENST00000612404 TBC1D3FA6NER0 549 aaPredicted RBP17.42■□□□□ 0.38
SREK1-216ENST00000612404 TBC1D3LB9A6J9 549 aa17.42■□□□□ 0.38
SREK1-216ENST00000612404 TPP1O14773 563 aa17.42■□□□□ 0.38
SREK1-216ENST00000612404 OR1I1O60431 355 aa17.42■□□□□ 0.38
SREK1-216ENST00000612404 TM7SF2O76062 418 aa17.42■□□□□ 0.38
SREK1-216ENST00000612404 ALDOAP04075 364 aaKnown RBP17.42■□□□□ 0.38
SREK1-216ENST00000612404 DCNP07585 359 aaKnown RBP17.42■□□□□ 0.38
SREK1-216ENST00000612404 TBC1D3HP0C7X1 549 aa17.42■□□□□ 0.38
SREK1-216ENST00000612404 PYGBP11216 843 aa17.42■□□□□ 0.38
SREK1-216ENST00000612404 CREB1P16220 341 aa17.42■□□□□ 0.38
SREK1-216ENST00000612404 PPARDQ03181 441 aa17.42■□□□□ 0.38
SREK1-216ENST00000612404 DBN1Q16643 649 aa17.42■□□□□ 0.38
SREK1-216ENST00000612404 SETMARQ53H47 684 aaPredicted RBP17.42■□□□□ 0.38
SREK1-216ENST00000612404 HENMT1Q5T8I9 393 aaKnown RBP17.42■□□□□ 0.38
SREK1-216ENST00000612404 SEL1L3Q68CR1 1132 aa17.42■□□□□ 0.38
SREK1-216ENST00000612404 TBC1D3GQ6DHY5 549 aa17.42■□□□□ 0.38
SREK1-216ENST00000612404 TBC1D3CQ6IPX1 549 aa17.42■□□□□ 0.38
SREK1-216ENST00000612404 CYP2U1Q7Z449 544 aa17.42■□□□□ 0.38
SREK1-216ENST00000612404 SLC41A1Q8IVJ1 513 aa17.42■□□□□ 0.38
SREK1-216ENST00000612404 TBC1D3Q8IZP1 549 aaPredicted RBP17.42■□□□□ 0.38
SREK1-216ENST00000612404 KRT222Q8N1A0 295 aa17.42■□□□□ 0.38
SREK1-216ENST00000612404 TRAM1L1Q8N609 369 aa17.42■□□□□ 0.38
SREK1-216ENST00000612404 SCG3Q8WXD2 468 aaKnown RBP17.42■□□□□ 0.38
SREK1-216ENST00000612404 ZSCAN5AQ9BUG6 496 aa17.42■□□□□ 0.38
SREK1-216ENST00000612404 SENP1Q9P0U3 644 aa17.42■□□□□ 0.38
SREK1-216ENST00000612404 NFKBIL1Q9UBC1 381 aaPredicted RBP17.42■□□□□ 0.38
SREK1-216ENST00000612404 TRBV5-4A0A0C4DH59 114 aa17.42■□□□□ 0.38
SREK1-216ENST00000612404 RFPL1O75677 317 aa17.42■□□□□ 0.38
SREK1-216ENST00000612404 ACRV1P26436 265 aa17.42■□□□□ 0.38
SREK1-216ENST00000612404 FMO4P31512 558 aa17.42■□□□□ 0.38
SREK1-216ENST00000612404 SERPINB8P50452 374 aa17.42■□□□□ 0.38
SREK1-216ENST00000612404 CLCN5P51795 746 aa17.42■□□□□ 0.38
SREK1-216ENST00000612404 USP10Q14694 798 aaKnown RBP17.42■□□□□ 0.38
SREK1-216ENST00000612404 TMEM31Q5JXX7 168 aa17.42■□□□□ 0.38
SREK1-216ENST00000612404 RBM20Q5T481 1227 aaKnown RBP17.42■□□□□ 0.38
SREK1-216ENST00000612404 LYPLAL1Q5VWZ2 237 aa17.42■□□□□ 0.38
SREK1-216ENST00000612404 CMC1Q7Z7K0 106 aa17.42■□□□□ 0.38
SREK1-216ENST00000612404 RAVER1Q8IY67 606 aaKnown RBP17.42■□□□□ 0.38
SREK1-216ENST00000612404 NXPE1Q8N323 547 aa17.42■□□□□ 0.38
SREK1-216ENST00000612404 GDAP1Q8TB36 358 aa17.42■□□□□ 0.38
SREK1-216ENST00000612404 LPGAT1Q92604 370 aa17.42■□□□□ 0.38
SREK1-216ENST00000612404 CLDN23Q96B33 292 aa17.42■□□□□ 0.38
SREK1-216ENST00000612404 CHRDQ9H2X0 955 aa17.42■□□□□ 0.38
SREK1-216ENST00000612404 PLXNA2O75051 1894 aa17.42■□□□□ 0.38
SREK1-216ENST00000612404 C7P10643 843 aa17.41■□□□□ 0.38
SREK1-216ENST00000612404 BRAFP15056 766 aa17.41■□□□□ 0.38
SREK1-216ENST00000612404 TYK2P29597 1187 aa17.41■□□□□ 0.38
SREK1-216ENST00000612404 SLC12A2P55011 1212 aa17.41■□□□□ 0.38
SREK1-216ENST00000612404 RPS21P63220 83 aaKnown RBP17.41■□□□□ 0.38
SREK1-216ENST00000612404 DNAJC3Q13217 504 aa17.41■□□□□ 0.38
SREK1-216ENST00000612404 CNPY4Q8N129 248 aa17.41■□□□□ 0.38
SREK1-216ENST00000612404 KLK6Q92876 244 aa17.41■□□□□ 0.38
SREK1-216ENST00000612404 ULK4Q96C45 1275 aa17.41■□□□□ 0.38
SREK1-216ENST00000612404 SELENOSQ9BQE4 189 aa17.41■□□□□ 0.38
SREK1-216ENST00000612404 CCDC68Q9H2F9 335 aa17.41■□□□□ 0.38
SREK1-216ENST00000612404 KCNK9Q9NPC2 374 aa17.41■□□□□ 0.38
SREK1-216ENST00000612404 SNX15Q9NRS6 342 aa17.41■□□□□ 0.38
SREK1-216ENST00000612404 OGFRQ9NZT2 677 aa17.41■□□□□ 0.38
SREK1-216ENST00000612404 EBF1Q9UH73 591 aa17.41■□□□□ 0.38
SREK1-216ENST00000612404 ZFR2Q9UPR6 939 aaKnown RBP17.41■□□□□ 0.38
SREK1-216ENST00000612404 ACTL7BQ9Y614 415 aa17.41■□□□□ 0.38
SREK1-216ENST00000612404 A0A1W2PQU0 124 aa17.41■□□□□ 0.38
SREK1-216ENST00000612404 FADS2P1A8MWK0 482 aa17.41■□□□□ 0.38
SREK1-216ENST00000612404 RNGTTO60942 597 aaKnown RBP17.41■□□□□ 0.38
SREK1-216ENST00000612404 SPAG7O75391 227 aa17.41■□□□□ 0.38
SREK1-216ENST00000612404 NR1D1P20393 614 aa17.41■□□□□ 0.38
SREK1-216ENST00000612404 PTGER3P43115 390 aa17.41■□□□□ 0.38
SREK1-216ENST00000612404 RAET1GQ6H3X3 334 aa17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms