RNA–Protein interactions for RNA: ENST00000611068.1

RTN1-209, Transcript of reticulon 1, humanhuman

TSL 5 BASIC

Gene RTN1, Length 2,647 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-209ENST00000611068 FBXL22Q6P050 247 aa15.92■□□□□ 0.14
RTN1-209ENST00000611068 PDZD4Q76G19 769 aaPredicted RBP15.92■□□□□ 0.14
RTN1-209ENST00000611068 CTAGE3PQ8IX95 158 aa15.92■□□□□ 0.14
RTN1-209ENST00000611068 C7orf61Q8IZ16 206 aa15.92■□□□□ 0.14
RTN1-209ENST00000611068 OR52K1Q8NGK4 314 aa15.92■□□□□ 0.14
RTN1-209ENST00000611068 ZSCAN18Q8TBC5 510 aaPredicted RBP15.92■□□□□ 0.14
RTN1-209ENST00000611068 USP13Q92995 863 aaPredicted RBP15.92■□□□□ 0.14
RTN1-209ENST00000611068 WBP2Q969T9 261 aa15.92■□□□□ 0.14
RTN1-209ENST00000611068 CMTM5Q96DZ9 223 aa15.92■□□□□ 0.14
RTN1-209ENST00000611068 SLC39A13Q96H72 371 aa15.92■□□□□ 0.14
RTN1-209ENST00000611068 RPRD1AQ96P16 312 aaPredicted RBP15.92■□□□□ 0.14
RTN1-209ENST00000611068 NOL6Q9H6R4 1146 aaKnown RBP15.92■□□□□ 0.14
RTN1-209ENST00000611068 POLR1BQ9H9Y6 1135 aa15.92■□□□□ 0.14
RTN1-209ENST00000611068 IL37Q9NZH6 218 aa15.92■□□□□ 0.14
RTN1-209ENST00000611068 ARHGAP26Q9UNA1 814 aa15.92■□□□□ 0.14
RTN1-209ENST00000611068 SATB2Q9UPW6 733 aa15.92■□□□□ 0.14
RTN1-209ENST00000611068 TEX264Q9Y6I9 313 aa15.92■□□□□ 0.14
RTN1-209ENST00000611068 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP15.91■□□□□ 0.14
RTN1-209ENST00000611068 IQANK1A0A1B0GTG1 560 aa15.91■□□□□ 0.14
RTN1-209ENST00000611068 TCRBV9S1A1TA0A576 114 aa15.91■□□□□ 0.14
RTN1-209ENST00000611068 AIM2O14862 343 aa15.91■□□□□ 0.14
RTN1-209ENST00000611068 KIAA0355O15063 1070 aa15.91■□□□□ 0.14
RTN1-209ENST00000611068 FGF18O76093 207 aa15.91■□□□□ 0.14
RTN1-209ENST00000611068 SEC24DO94855 1032 aaPredicted RBP15.91■□□□□ 0.14
RTN1-209ENST00000611068 EFEMP2O95967 443 aa15.91■□□□□ 0.14
RTN1-209ENST00000611068 MGAT1P26572 445 aa15.91■□□□□ 0.14
RTN1-209ENST00000611068 HCAR3P49019 387 aa15.91■□□□□ 0.14
RTN1-209ENST00000611068 ZNF135P52742 658 aaPredicted RBP15.91■□□□□ 0.14
RTN1-209ENST00000611068 PHC1P78364 1004 aa15.91■□□□□ 0.14
RTN1-209ENST00000611068 CHRNEQ04844 493 aa15.91■□□□□ 0.14
RTN1-209ENST00000611068 PDPK2PQ6A1A2 396 aa15.91■□□□□ 0.14
RTN1-209ENST00000611068 ZFP1Q6P2D0 407 aa15.91■□□□□ 0.14
RTN1-209ENST00000611068 TRMT10BQ6PF06 316 aaKnown RBP15.91■□□□□ 0.14
RTN1-209ENST00000611068 FRA10AC1Q70Z53 315 aa15.91■□□□□ 0.14
RTN1-209ENST00000611068 ARHGAP12Q8IWW6 846 aa15.91■□□□□ 0.14
RTN1-209ENST00000611068 KLHL5Q96PQ7 755 aa15.91■□□□□ 0.14
RTN1-209ENST00000611068 RC3H2Q9HBD1 1191 aaKnown RBP15.91■□□□□ 0.14
RTN1-209ENST00000611068 CCDC177Q9NQR7 707 aaPredicted RBP15.91■□□□□ 0.14
RTN1-209ENST00000611068 PATJQ8NI35 1801 aa15.91■□□□□ 0.14
RTN1-209ENST00000611068 CXorf49A8MYA2 514 aaPredicted RBP15.91■□□□□ 0.14
RTN1-209ENST00000611068 CLPXO76031 633 aa15.91■□□□□ 0.14
RTN1-209ENST00000611068 MT-CYBP00156 380 aaPredicted RBP15.91■□□□□ 0.14
RTN1-209ENST00000611068 GJA1P17302 382 aa15.91■□□□□ 0.14
RTN1-209ENST00000611068 MAP4P27816 1152 aaKnown RBP15.91■□□□□ 0.14
RTN1-209ENST00000611068 ATG14Q6ZNE5 492 aa15.91■□□□□ 0.14
RTN1-209ENST00000611068 PRR23BQ6ZRT6 265 aa15.91■□□□□ 0.14
RTN1-209ENST00000611068 DENND1CQ8IV53 801 aa15.91■□□□□ 0.14
RTN1-209ENST00000611068 ATPAF2Q8N5M1 289 aa15.91■□□□□ 0.14
RTN1-209ENST00000611068 LSMEM1Q8N8F7 131 aa15.91■□□□□ 0.14
RTN1-209ENST00000611068 CDRT15Q96T59 188 aa15.91■□□□□ 0.14
RTN1-209ENST00000611068 ATXN3LQ9H3M9 355 aa15.91■□□□□ 0.14
RTN1-209ENST00000611068 STN1Q9H668 368 aaKnown RBP15.91■□□□□ 0.14
RTN1-209ENST00000611068 THAP1Q9NVV9 213 aa15.91■□□□□ 0.14
RTN1-209ENST00000611068 PRKAG2Q9UGJ0 569 aa15.91■□□□□ 0.14
RTN1-209ENST00000611068 YIPF1Q9Y548 306 aa15.91■□□□□ 0.14
RTN1-209ENST00000611068 ACTL7AQ9Y615 435 aa15.91■□□□□ 0.14
RTN1-209ENST00000611068 CENPBD1B2RD01 187 aa15.9■□□□□ 0.14
RTN1-209ENST00000611068 TRIM49D1C9J1S8 452 aa15.9■□□□□ 0.14
RTN1-209ENST00000611068 E7ESA3 106 aa15.9■□□□□ 0.14
RTN1-209ENST00000611068 J3KR12 359 aa15.9■□□□□ 0.14
RTN1-209ENST00000611068 COCHO43405 550 aa15.9■□□□□ 0.14
RTN1-209ENST00000611068 TSPAN3O60637 253 aa15.9■□□□□ 0.14
RTN1-209ENST00000611068 FGBP02675 491 aa15.9■□□□□ 0.14
RTN1-209ENST00000611068 HMGA1P17096 107 aaKnown RBP15.9■□□□□ 0.14
RTN1-209ENST00000611068 RFC2P35250 354 aa15.9■□□□□ 0.14
RTN1-209ENST00000611068 P2RX3P56373 397 aa15.9■□□□□ 0.14
RTN1-209ENST00000611068 CDK18Q07002 472 aa15.9■□□□□ 0.14
RTN1-209ENST00000611068 NADSYN1Q6IA69 706 aa15.9■□□□□ 0.14
RTN1-209ENST00000611068 C16orf46Q6P387 395 aa15.9■□□□□ 0.14
RTN1-209ENST00000611068 CNTD1Q8N815 330 aa15.9■□□□□ 0.14
RTN1-209ENST00000611068 SLC22A12Q96S37 553 aa15.9■□□□□ 0.14
RTN1-209ENST00000611068 PLAC1Q9HBJ0 212 aa15.9■□□□□ 0.14
RTN1-209ENST00000611068 MRPL17Q9NRX2 175 aaKnown RBP15.9■□□□□ 0.14
RTN1-209ENST00000611068 FAM92AA1XBS5 289 aa15.9■□□□□ 0.14
RTN1-209ENST00000611068 ZBTB14O43829 449 aa15.9■□□□□ 0.14
RTN1-209ENST00000611068 SPAG6O75602 509 aa15.9■□□□□ 0.14
RTN1-209ENST00000611068 BCL10O95999 233 aa15.9■□□□□ 0.14
RTN1-209ENST00000611068 ATP5BP06576 529 aaKnown RBP15.9■□□□□ 0.14
RTN1-209ENST00000611068 MYOGP15173 224 aa15.9■□□□□ 0.14
RTN1-209ENST00000611068 MATN1P21941 496 aa15.9■□□□□ 0.14
RTN1-209ENST00000611068 IDH3AP50213 366 aa15.9■□□□□ 0.14
RTN1-209ENST00000611068 NUDT2P50583 147 aa15.9■□□□□ 0.14
RTN1-209ENST00000611068 MAXP61244 160 aa15.9■□□□□ 0.14
RTN1-209ENST00000611068 CTAG1AP78358 180 aa15.9■□□□□ 0.14
RTN1-209ENST00000611068 CLCQ05315 142 aa15.9■□□□□ 0.14
RTN1-209ENST00000611068 LRIT3Q3SXY7 679 aa15.9■□□□□ 0.14
RTN1-209ENST00000611068 TTC33Q6PID6 262 aaPredicted RBP15.9■□□□□ 0.14
RTN1-209ENST00000611068 ANKRD13BQ86YJ7 626 aa15.9■□□□□ 0.14
RTN1-209ENST00000611068 PPM1NQ8N819 430 aa15.9■□□□□ 0.14
RTN1-209ENST00000611068 ATP6V1E2Q96A05 226 aa15.9■□□□□ 0.14
RTN1-209ENST00000611068 ZUFSPQ96AP4 578 aa15.9■□□□□ 0.14
RTN1-209ENST00000611068 C1orf50Q9BV19 199 aa15.9■□□□□ 0.14
RTN1-209ENST00000611068 IL23AQ9NPF7 189 aa15.9■□□□□ 0.14
RTN1-209ENST00000611068 AFF4Q9UHB7 1163 aaKnown RBP15.9■□□□□ 0.14
RTN1-209ENST00000611068 CNOT11Q9UKZ1 510 aaKnown RBP15.9■□□□□ 0.14
RTN1-209ENST00000611068 BACE2Q9Y5Z0 518 aa15.9■□□□□ 0.14
RTN1-209ENST00000611068 ZNF840PA6NDX5 716 aa15.89■□□□□ 0.13
RTN1-209ENST00000611068 STX16-NPEPL1H3BU86 382 aa15.89■□□□□ 0.13
RTN1-209ENST00000611068 TAF4O00268 1085 aa15.89■□□□□ 0.13
RTN1-209ENST00000611068 AURKAO14965 403 aa15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 74.1 ms