RNA–Protein interactions for RNA: ENST00000601291.5

IRF3-228, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 1,556 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-228ENST00000601291 KCNK9Q9NPC2 374 aa22.45■■□□□ 1.18
IRF3-228ENST00000601291 SNX15Q9NRS6 342 aa22.45■■□□□ 1.18
IRF3-228ENST00000601291 SERGEFQ9UGK8 458 aa22.45■■□□□ 1.18
IRF3-228ENST00000601291 FZD4Q9ULV1 537 aa22.45■■□□□ 1.18
IRF3-228ENST00000601291 CRYL1Q9Y2S2 319 aa22.45■■□□□ 1.18
IRF3-228ENST00000601291 GPR39O43194 453 aa22.44■■□□□ 1.18
IRF3-228ENST00000601291 MMP20O60882 483 aa22.44■■□□□ 1.18
IRF3-228ENST00000601291 CREB1P16220 341 aa22.44■■□□□ 1.18
IRF3-228ENST00000601291 ACRV1P26436 265 aa22.44■■□□□ 1.18
IRF3-228ENST00000601291 PTGER3P43115 390 aa22.44■■□□□ 1.18
IRF3-228ENST00000601291 POU4F1Q01851 419 aa22.44■■□□□ 1.18
IRF3-228ENST00000601291 HENMT1Q5T8I9 393 aaKnown RBP22.44■■□□□ 1.18
IRF3-228ENST00000601291 FAM45BPQ6NSW5 357 aa22.44■■□□□ 1.18
IRF3-228ENST00000601291 ZNF765Q7L2R6 523 aa22.44■■□□□ 1.18
IRF3-228ENST00000601291 SERPINA9Q86WD7 417 aa22.44■■□□□ 1.18
IRF3-228ENST00000601291 GJD3Q8N144 294 aa22.44■■□□□ 1.18
IRF3-228ENST00000601291 TRAM1L1Q8N609 369 aa22.44■■□□□ 1.18
IRF3-228ENST00000601291 PNPLA1Q8N8W4 532 aa22.44■■□□□ 1.18
IRF3-228ENST00000601291 FAM45AQ8TCE6 357 aa22.44■■□□□ 1.18
IRF3-228ENST00000601291 NUS1Q96E22 293 aa22.44■■□□□ 1.18
IRF3-228ENST00000601291 TSPAN17Q96FV3 270 aa22.44■■□□□ 1.18
IRF3-228ENST00000601291 CABS1Q96KC9 395 aa22.44■■□□□ 1.18
IRF3-228ENST00000601291 KCTD5Q9NXV2 234 aa22.44■■□□□ 1.18
IRF3-228ENST00000601291 MTF2Q9Y483 593 aaPredicted RBP22.44■■□□□ 1.18
IRF3-228ENST00000601291 AGAP14A8MT82 685 aa22.43■■□□□ 1.18
IRF3-228ENST00000601291 PCDH8O95206 1070 aa22.43■■□□□ 1.18
IRF3-228ENST00000601291 MPOP05164 745 aa22.43■■□□□ 1.18
IRF3-228ENST00000601291 UGT1A6P19224 532 aa22.43■■□□□ 1.18
IRF3-228ENST00000601291 NDUFV2P19404 249 aa22.43■■□□□ 1.18
IRF3-228ENST00000601291 SAT1P21673 171 aa22.43■■□□□ 1.18
IRF3-228ENST00000601291 UGT1A1P22309 533 aa22.43■■□□□ 1.18
IRF3-228ENST00000601291 UGT1A4P22310 534 aa22.43■■□□□ 1.18
IRF3-228ENST00000601291 UGT1A3P35503 534 aa22.43■■□□□ 1.18
IRF3-228ENST00000601291 UGT1A5P35504 534 aa22.43■■□□□ 1.18
IRF3-228ENST00000601291 CCNFP41002 786 aa22.43■■□□□ 1.18
IRF3-228ENST00000601291 TAS2R38P59533 333 aa22.43■■□□□ 1.18
IRF3-228ENST00000601291 SLC18A2Q05940 514 aa22.43■■□□□ 1.18
IRF3-228ENST00000601291 DBN1Q16643 649 aa22.43■■□□□ 1.18
IRF3-228ENST00000601291 ATP13A5Q4VNC0 1218 aa22.43■■□□□ 1.18
IRF3-228ENST00000601291 SLC41A1Q8IVJ1 513 aa22.43■■□□□ 1.18
IRF3-228ENST00000601291 RBFAQ8N0V3 343 aa22.43■■□□□ 1.18
IRF3-228ENST00000601291 NXPE1Q8N323 547 aa22.43■■□□□ 1.18
IRF3-228ENST00000601291 SCAMP4Q969E2 229 aa22.43■■□□□ 1.18
IRF3-228ENST00000601291 AP2M1Q96CW1 435 aa22.43■■□□□ 1.18
IRF3-228ENST00000601291 APOPT1Q96IL0 206 aa22.43■■□□□ 1.18
IRF3-228ENST00000601291 NDNQ99608 321 aa22.43■■□□□ 1.18
IRF3-228ENST00000601291 RIOK2Q9BVS4 552 aaKnown RBP22.43■■□□□ 1.18
IRF3-228ENST00000601291 FOXQ1Q9C009 403 aa22.43■■□□□ 1.18
IRF3-228ENST00000601291 ABCG8Q9H221 673 aa22.43■■□□□ 1.18
IRF3-228ENST00000601291 PCMTD2Q9NV79 361 aa22.43■■□□□ 1.18
IRF3-228ENST00000601291 TMEM120BA0PK00 339 aa22.42■■□□□ 1.18
IRF3-228ENST00000601291 COPEO14579 308 aa22.42■■□□□ 1.18
IRF3-228ENST00000601291 PRPF4O43172 522 aaKnown RBP eCLIP22.42■■□□□ 1.189e-7■■□□□ 13.2
IRF3-228ENST00000601291 PLRG1O43660 514 aaKnown RBP22.42■■□□□ 1.18
IRF3-228ENST00000601291 SPAG7O75391 227 aa22.42■■□□□ 1.18
IRF3-228ENST00000601291 RECQL5O94762 991 aaPredicted RBP22.42■■□□□ 1.18
IRF3-228ENST00000601291 STMN1P16949 149 aa22.42■■□□□ 1.18
IRF3-228ENST00000601291 ZNF7P17097 686 aaPredicted RBP22.42■■□□□ 1.18
IRF3-228ENST00000601291 GM2AP17900 193 aa22.42■■□□□ 1.18
IRF3-228ENST00000601291 MAGEA12P43365 314 aa22.42■■□□□ 1.18
IRF3-228ENST00000601291 ADARP55265 1226 aaKnown RBP22.42■■□□□ 1.18
IRF3-228ENST00000601291 CREB5Q02930 508 aa22.42■■□□□ 1.18
IRF3-228ENST00000601291 TAF1BQ53T94 588 aaPredicted RBP22.42■■□□□ 1.18
IRF3-228ENST00000601291 RBM20Q5T481 1227 aaKnown RBP22.42■■□□□ 1.18
IRF3-228ENST00000601291 HECTD2Q5U5R9 776 aa22.42■■□□□ 1.18
IRF3-228ENST00000601291 RAPH1Q70E73 1250 aa22.42■■□□□ 1.18
IRF3-228ENST00000601291 CMC1Q7Z7K0 106 aa22.42■■□□□ 1.18
IRF3-228ENST00000601291 BANPQ8N9N5 519 aa22.42■■□□□ 1.18
IRF3-228ENST00000601291 FLCNQ8NFG4 579 aa22.42■■□□□ 1.18
IRF3-228ENST00000601291 OR14C36Q8NHC7 312 aa22.42■■□□□ 1.18
IRF3-228ENST00000601291 IQCGQ9H095 443 aaKnown RBP22.42■■□□□ 1.18
IRF3-228ENST00000601291 CAB39LQ9H9S4 337 aa22.42■■□□□ 1.18
IRF3-228ENST00000601291 TBC1D17Q9HA65 648 aa22.42■■□□□ 1.18
IRF3-228ENST00000601291 SMOXQ9NWM0 555 aa22.42■■□□□ 1.18
IRF3-228ENST00000601291 MUTYHQ9UIF7 546 aa22.42■■□□□ 1.18
IRF3-228ENST00000601291 COQ6Q9Y2Z9 468 aa22.42■■□□□ 1.18
IRF3-228ENST00000601291 FAM47DPA6NHR8 397 aa22.42■■□□□ 1.18
IRF3-228ENST00000601291 GABRG2P18507 467 aa22.42■■□□□ 1.18
IRF3-228ENST00000601291 ATP1A2P50993 1020 aa22.42■■□□□ 1.18
IRF3-228ENST00000601291 RAB10P61026 200 aa22.42■■□□□ 1.18
IRF3-228ENST00000601291 ITIH4Q14624 930 aa22.42■■□□□ 1.18
IRF3-228ENST00000601291 SETMARQ53H47 684 aaPredicted RBP22.42■■□□□ 1.18
IRF3-228ENST00000601291 TRIM67Q6ZTA4 783 aa22.42■■□□□ 1.18
IRF3-228ENST00000601291 SH2D5Q6ZV89 423 aa22.42■■□□□ 1.18
IRF3-228ENST00000601291 ACVR1CQ8NER5 493 aa22.42■■□□□ 1.18
IRF3-228ENST00000601291 HMGB4Q8WW32 186 aa22.42■■□□□ 1.18
IRF3-228ENST00000601291 MKS1Q9NXB0 559 aa22.42■■□□□ 1.18
IRF3-228ENST00000601291 NKIRAS1Q9NYS0 192 aa22.42■■□□□ 1.18
IRF3-228ENST00000601291 TLK1Q9UKI8 766 aa22.42■■□□□ 1.18
IRF3-228ENST00000601291 PCDHB1Q9Y5F3 818 aa22.42■■□□□ 1.18
IRF3-228ENST00000601291 COMMD10Q9Y6G5 202 aa22.42■■□□□ 1.18
IRF3-228ENST00000601291 STK25O00506 426 aa22.41■■□□□ 1.18
IRF3-228ENST00000601291 PRMT5O14744 637 aaPredicted RBP22.41■■□□□ 1.18
IRF3-228ENST00000601291 TYROBPO43914 113 aa22.41■■□□□ 1.18
IRF3-228ENST00000601291 TM7SF2O76062 418 aa22.41■■□□□ 1.18
IRF3-228ENST00000601291 ESR1P03372 595 aa22.41■■□□□ 1.18
IRF3-228ENST00000601291 CRABP2P29373 138 aa22.41■■□□□ 1.18
IRF3-228ENST00000601291 FMO4P31512 558 aa22.41■■□□□ 1.18
IRF3-228ENST00000601291 CCT5P48643 541 aa22.41■■□□□ 1.18
IRF3-228ENST00000601291 KIAA1161Q6NSJ0 714 aa22.41■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms