RNA–Protein interactions for RNA: ENST00000600718.5

SHKBP1-224, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-224ENST00000600718 GRAMD1AQ96CP6 724 aa17.55■□□□□ 0.4
SHKBP1-224ENST00000600718 UBXN10Q96LJ8 280 aa17.55■□□□□ 0.4
SHKBP1-224ENST00000600718 BIRC8Q96P09 236 aa17.55■□□□□ 0.4
SHKBP1-224ENST00000600718 GPR78Q96P69 363 aa17.55■□□□□ 0.4
SHKBP1-224ENST00000600718 MECRQ9BV79 373 aa17.55■□□□□ 0.4
SHKBP1-224ENST00000600718 PHF7Q9BWX1 381 aaPredicted RBP17.55■□□□□ 0.4
SHKBP1-224ENST00000600718 KCNK12Q9HB15 430 aa17.55■□□□□ 0.4
SHKBP1-224ENST00000600718 DYRK4Q9NR20 520 aa17.55■□□□□ 0.4
SHKBP1-224ENST00000600718 TAS2R13Q9NYV9 303 aa17.55■□□□□ 0.4
SHKBP1-224ENST00000600718 COPG2Q9UBF2 871 aa17.55■□□□□ 0.4
SHKBP1-224ENST00000600718 LIMD1Q9UGP4 676 aa17.55■□□□□ 0.4
SHKBP1-224ENST00000600718 PCDHB1Q9Y5F3 818 aa17.55■□□□□ 0.4
SHKBP1-224ENST00000600718 RHOBTB1O94844 696 aa17.54■□□□□ 0.4
SHKBP1-224ENST00000600718 LTA4HP09960 611 aaKnown RBP17.54■□□□□ 0.4
SHKBP1-224ENST00000600718 ZNF7P17097 686 aaPredicted RBP17.54■□□□□ 0.4
SHKBP1-224ENST00000600718 UGT1A6P19224 532 aa17.54■□□□□ 0.4
SHKBP1-224ENST00000600718 BGNP21810 368 aa17.54■□□□□ 0.4
SHKBP1-224ENST00000600718 UGT1A1P22309 533 aa17.54■□□□□ 0.4
SHKBP1-224ENST00000600718 UGT1A4P22310 534 aa17.54■□□□□ 0.4
SHKBP1-224ENST00000600718 ALDH3A1P30838 453 aa17.54■□□□□ 0.4
SHKBP1-224ENST00000600718 UGT1A3P35503 534 aa17.54■□□□□ 0.4
SHKBP1-224ENST00000600718 UGT1A5P35504 534 aa17.54■□□□□ 0.4
SHKBP1-224ENST00000600718 MMP12P39900 470 aa17.54■□□□□ 0.4
SHKBP1-224ENST00000600718 TIAL1Q01085 375 aaKnown RBP eCLIP17.54■□□□□ 0.4
SHKBP1-224ENST00000600718 SKIV2LQ15477 1246 aaKnown RBP17.54■□□□□ 0.4
SHKBP1-224ENST00000600718 FBXL19Q6PCT2 694 aa17.54■□□□□ 0.4
SHKBP1-224ENST00000600718 RAVER1Q8IY67 606 aaKnown RBP17.54■□□□□ 0.4
SHKBP1-224ENST00000600718 CHPFQ8IZ52 775 aa17.54■□□□□ 0.4
SHKBP1-224ENST00000600718 RBFAQ8N0V3 343 aa17.54■□□□□ 0.4
SHKBP1-224ENST00000600718 DTX3LQ8TDB6 740 aa17.54■□□□□ 0.4
SHKBP1-224ENST00000600718 DNASE1L2Q92874 299 aa17.54■□□□□ 0.4
SHKBP1-224ENST00000600718 SCYL1Q96KG9 808 aa17.54■□□□□ 0.4
SHKBP1-224ENST00000600718 CDH19Q9H159 772 aa17.54■□□□□ 0.4
SHKBP1-224ENST00000600718 CRLS1Q9UJA2 301 aa17.54■□□□□ 0.4
SHKBP1-224ENST00000600718 ANTXRLA6NF34 631 aa17.53■□□□□ 0.4
SHKBP1-224ENST00000600718 PRMT5O14744 637 aaPredicted RBP17.53■□□□□ 0.4
SHKBP1-224ENST00000600718 OR1I1O60431 355 aa17.53■□□□□ 0.4
SHKBP1-224ENST00000600718 EDF1O60869 148 aaKnown RBP17.53■□□□□ 0.4
SHKBP1-224ENST00000600718 DNAJC6O75061 913 aa17.53■□□□□ 0.4
SHKBP1-224ENST00000600718 CCDC166P0CW27 439 aa17.53■□□□□ 0.4
SHKBP1-224ENST00000600718 RPS3P23396 243 aaKnown RBP eCLIP17.53■□□□□ 0.4
SHKBP1-224ENST00000600718 ACRV1P26436 265 aa17.53■□□□□ 0.4
SHKBP1-224ENST00000600718 KIR2DL1P43626 348 aaPredicted RBP17.53■□□□□ 0.4
SHKBP1-224ENST00000600718 DCDC1P59894 354 aa17.53■□□□□ 0.4
SHKBP1-224ENST00000600718 ELP6Q0PNE2 266 aa17.53■□□□□ 0.4
SHKBP1-224ENST00000600718 DLG1Q12959 904 aa17.53■□□□□ 0.4
SHKBP1-224ENST00000600718 RALGDSQ12967 914 aa17.53■□□□□ 0.4
SHKBP1-224ENST00000600718 ITGA9Q13797 1035 aa17.53■□□□□ 0.4
SHKBP1-224ENST00000600718 GKAP1Q5VSY0 366 aaPredicted RBP17.53■□□□□ 0.4
SHKBP1-224ENST00000600718 FAM46CQ5VWP2 391 aa17.53■□□□□ 0.4
SHKBP1-224ENST00000600718 PIGWQ7Z7B1 504 aa17.53■□□□□ 0.4
SHKBP1-224ENST00000600718 KCNV2Q8TDN2 545 aa17.53■□□□□ 0.4
SHKBP1-224ENST00000600718 ULK4Q96C45 1275 aa17.53■□□□□ 0.4
SHKBP1-224ENST00000600718 P2RY12Q9H244 342 aa17.53■□□□□ 0.4
SHKBP1-224ENST00000600718 ZDHHC4Q9NPG8 344 aa17.53■□□□□ 0.4
SHKBP1-224ENST00000600718 IGSF5Q9NSI5 407 aa17.53■□□□□ 0.4
SHKBP1-224ENST00000600718 GOLGA8CPA6NN73 597 aa17.53■□□□□ 0.4
SHKBP1-224ENST00000600718 PSMD11O00231 422 aa17.53■□□□□ 0.4
SHKBP1-224ENST00000600718 VPS26AO75436 327 aa17.53■□□□□ 0.4
SHKBP1-224ENST00000600718 PYGLP06737 847 aa17.53■□□□□ 0.4
SHKBP1-224ENST00000600718 PDAP1Q13442 181 aaKnown RBP17.53■□□□□ 0.4
SHKBP1-224ENST00000600718 CAMK2GQ13555 558 aaPredicted RBP17.53■□□□□ 0.4
SHKBP1-224ENST00000600718 CSHL1Q14406 222 aa17.53■□□□□ 0.4
SHKBP1-224ENST00000600718 PCLAFQ15004 111 aa17.53■□□□□ 0.4
SHKBP1-224ENST00000600718 CHI3L2Q15782 390 aa17.53■□□□□ 0.4
SHKBP1-224ENST00000600718 SWT1Q5T5J6 900 aaKnown RBP17.53■□□□□ 0.4
SHKBP1-224ENST00000600718 LRRC8EQ6NSJ5 796 aa17.53■□□□□ 0.4
SHKBP1-224ENST00000600718 KLC3Q6P597 504 aa17.53■□□□□ 0.4
SHKBP1-224ENST00000600718 RFLNAQ6ZTI6 216 aa17.53■□□□□ 0.4
SHKBP1-224ENST00000600718 FAM47EQ6ZV65 393 aa17.53■□□□□ 0.4
SHKBP1-224ENST00000600718 HSD11B1LQ7Z5J1 315 aa17.53■□□□□ 0.4
SHKBP1-224ENST00000600718 MMAAQ8IVH4 418 aaKnown RBP17.53■□□□□ 0.4
SHKBP1-224ENST00000600718 NXPE1Q8N323 547 aa17.53■□□□□ 0.4
SHKBP1-224ENST00000600718 FSTL5Q8N475 847 aaPredicted RBP17.53■□□□□ 0.4
SHKBP1-224ENST00000600718 HEXDCQ8WVB3 486 aa17.53■□□□□ 0.4
SHKBP1-224ENST00000600718 ELAC2Q9BQ52 826 aaKnown RBP17.53■□□□□ 0.4
SHKBP1-224ENST00000600718 FAM83DQ9H4H8 585 aa17.53■□□□□ 0.4
SHKBP1-224ENST00000600718 SYTL2Q9HCH5 934 aa17.53■□□□□ 0.4
SHKBP1-224ENST00000600718 NFKBIL1Q9UBC1 381 aaPredicted RBP17.53■□□□□ 0.4
SHKBP1-224ENST00000600718 G3V2L1 256 aa17.52■□□□□ 0.4
SHKBP1-224ENST00000600718 H0Y858 1186 aa17.52■□□□□ 0.4
SHKBP1-224ENST00000600718 EBAG9O00559 213 aa17.52■□□□□ 0.4
SHKBP1-224ENST00000600718 GPR39O43194 453 aa17.52■□□□□ 0.4
SHKBP1-224ENST00000600718 SKIV2L2P42285 1042 aaKnown RBP17.52■□□□□ 0.4
SHKBP1-224ENST00000600718 ITIH4Q14624 930 aa17.52■□□□□ 0.4
SHKBP1-224ENST00000600718 ACAP2Q15057 778 aa17.52■□□□□ 0.4
SHKBP1-224ENST00000600718 CTSL3PQ5NE16 218 aa17.52■□□□□ 0.4
SHKBP1-224ENST00000600718 TXNDC11Q6PKC3 985 aa17.52■□□□□ 0.4
SHKBP1-224ENST00000600718 TMEM207Q6UWW9 146 aa17.52■□□□□ 0.4
SHKBP1-224ENST00000600718 LIPIQ6XZB0 460 aa17.52■□□□□ 0.4
SHKBP1-224ENST00000600718 ERN2Q76MJ5 926 aaKnown RBP17.52■□□□□ 0.4
SHKBP1-224ENST00000600718 PIM3Q86V86 326 aa17.52■□□□□ 0.4
SHKBP1-224ENST00000600718 NRSN1Q8IZ57 195 aa17.52■□□□□ 0.4
SHKBP1-224ENST00000600718 TMEM151AQ8N4L1 468 aa17.52■□□□□ 0.4
SHKBP1-224ENST00000600718 SREK1Q8WXA9 508 aaKnown RBP17.52■□□□□ 0.4
SHKBP1-224ENST00000600718 EZH1Q92800 747 aaPredicted RBP17.52■□□□□ 0.4
SHKBP1-224ENST00000600718 MRPL57Q9BQC6 102 aaKnown RBP17.52■□□□□ 0.4
SHKBP1-224ENST00000600718 HDAC8Q9BY41 377 aa17.52■□□□□ 0.4
SHKBP1-224ENST00000600718 CLPBQ9H078 707 aa17.52■□□□□ 0.4
SHKBP1-224ENST00000600718 SLCO1B3Q9NPD5 702 aa17.52■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms