RNA–Protein interactions for RNA: ENST00000600097.1

SMG9-210, Transcript of SMG9, nonsense mediated mRNA decay factor, humanhuman

TSL 2

Gene SMG9, Length 538 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG9-210ENST00000600097 DNAJC6O75061 913 aa17.04■□□□□ 0.32
SMG9-210ENST00000600097 TCF4P15884 667 aa17.04■□□□□ 0.32
SMG9-210ENST00000600097 CA4P22748 312 aa17.04■□□□□ 0.32
SMG9-210ENST00000600097 ABHD18Q0P651 414 aa17.04■□□□□ 0.32
SMG9-210ENST00000600097 CDC20Q12834 499 aa17.04■□□□□ 0.32
SMG9-210ENST00000600097 SKIDA1Q1XH10 827 aa17.04■□□□□ 0.32
SMG9-210ENST00000600097 ALG1LQ6GMV1 187 aa17.04■□□□□ 0.32
SMG9-210ENST00000600097 IYDQ6PHW0 289 aa17.04■□□□□ 0.32
SMG9-210ENST00000600097 CHST15Q7LFX5 561 aaPredicted RBP17.04■□□□□ 0.32
SMG9-210ENST00000600097 SLC9B2Q86UD5 537 aa17.04■□□□□ 0.32
SMG9-210ENST00000600097 AVL9Q8NBF6 648 aa17.04■□□□□ 0.32
SMG9-210ENST00000600097 NCSTNQ92542 709 aa17.04■□□□□ 0.32
SMG9-210ENST00000600097 RMI1Q9H9A7 625 aa17.04■□□□□ 0.32
SMG9-210ENST00000600097 AMACRQ9UHK6 382 aa17.04■□□□□ 0.32
SMG9-210ENST00000600097 TMEM184BQ9Y519 407 aaPredicted RBP17.04■□□□□ 0.32
SMG9-210ENST00000600097 KIR2DS5A0A0G2JLQ3 304 aa17.03■□□□□ 0.32
SMG9-210ENST00000600097 A0A0G2JNG1 304 aa17.03■□□□□ 0.32
SMG9-210ENST00000600097 KIR2DS3K7RE56 304 aa17.03■□□□□ 0.32
SMG9-210ENST00000600097 STK17BO94768 372 aa17.03■□□□□ 0.32
SMG9-210ENST00000600097 EML2O95834 649 aa17.03■□□□□ 0.32
SMG9-210ENST00000600097 RPL26P61254 145 aaKnown RBP17.03■□□□□ 0.32
SMG9-210ENST00000600097 NFATC2Q13469 925 aa17.03■□□□□ 0.32
SMG9-210ENST00000600097 KRT81Q14533 505 aa17.03■□□□□ 0.32
SMG9-210ENST00000600097 KIR2DS5Q14953 304 aa17.03■□□□□ 0.32
SMG9-210ENST00000600097 CRTC2Q53ET0 693 aaPredicted RBP17.03■□□□□ 0.32
SMG9-210ENST00000600097 TIGD7Q6NT04 549 aaPredicted RBP17.03■□□□□ 0.32
SMG9-210ENST00000600097 KDELC2Q7Z4H8 507 aa17.03■□□□□ 0.32
SMG9-210ENST00000600097 AOPEPQ8N6M6 819 aa17.03■□□□□ 0.32
SMG9-210ENST00000600097 NIPA2Q8N8Q9 360 aa17.03■□□□□ 0.32
SMG9-210ENST00000600097 APOBEC4Q8WW27 367 aaKnown RBP17.03■□□□□ 0.32
SMG9-210ENST00000600097 LYSMD1Q96S90 227 aa17.03■□□□□ 0.32
SMG9-210ENST00000600097 CTRCQ99895 268 aa17.03■□□□□ 0.32
SMG9-210ENST00000600097 TDRD1Q9BXT4 1180 aaKnown RBP17.03■□□□□ 0.32
SMG9-210ENST00000600097 TBC1D29Q9UFV1 150 aa17.03■□□□□ 0.32
SMG9-210ENST00000600097 RPL26L1Q9UNX3 145 aaKnown RBP17.03■□□□□ 0.32
SMG9-210ENST00000600097 LOC101059948A0A1B0GTJ6 334 aa17.02■□□□□ 0.32
SMG9-210ENST00000600097 OR5K4A6NMS3 321 aa17.02■□□□□ 0.32
SMG9-210ENST00000600097 POLR1CO15160 346 aaPredicted RBP17.02■□□□□ 0.32
SMG9-210ENST00000600097 ATP1A1P05023 1023 aaKnown RBP17.02■□□□□ 0.32
SMG9-210ENST00000600097 PRKAR1AP10644 381 aa17.02■□□□□ 0.32
SMG9-210ENST00000600097 F3P13726 295 aa17.02■□□□□ 0.32
SMG9-210ENST00000600097 GARSP41250 739 aaKnown RBP17.02■□□□□ 0.32
SMG9-210ENST00000600097 ZNF165P49910 485 aa17.02■□□□□ 0.32
SMG9-210ENST00000600097 FOXK1P85037 733 aa17.02■□□□□ 0.32
SMG9-210ENST00000600097 UBAP2LQ14157 1087 aaKnown RBP17.02■□□□□ 0.32
SMG9-210ENST00000600097 FILIP1LQ4L180 1135 aa17.02■□□□□ 0.32
SMG9-210ENST00000600097 CCDC122Q5T0U0 273 aa17.02■□□□□ 0.32
SMG9-210ENST00000600097 E4F1Q66K89 784 aaPredicted RBP17.02■□□□□ 0.32
SMG9-210ENST00000600097 TXNRD3NBQ6F5E7 133 aa17.02■□□□□ 0.32
SMG9-210ENST00000600097 LYSMD3Q7Z3D4 306 aa17.02■□□□□ 0.32
SMG9-210ENST00000600097 TIPARPQ7Z3E1 657 aaKnown RBP17.02■□□□□ 0.32
SMG9-210ENST00000600097 PLXDC1Q8IUK5 500 aa17.02■□□□□ 0.32
SMG9-210ENST00000600097 ESX1Q8N693 406 aa17.02■□□□□ 0.32
SMG9-210ENST00000600097 MAML1Q92585 1016 aa17.02■□□□□ 0.32
SMG9-210ENST00000600097 FATE1Q969F0 183 aa17.02■□□□□ 0.32
SMG9-210ENST00000600097 SMIM14Q96QK8 99 aa17.02■□□□□ 0.32
SMG9-210ENST00000600097 NAT10Q9H0A0 1025 aaKnown RBP17.02■□□□□ 0.32
SMG9-210ENST00000600097 ANKMY1Q9P2S6 941 aa17.02■□□□□ 0.32
SMG9-210ENST00000600097 IP6K2Q9UHH9 426 aa17.02■□□□□ 0.32
SMG9-210ENST00000600097 CHKBQ9Y259 395 aa17.02■□□□□ 0.32
SMG9-210ENST00000600097 PRKAB1Q9Y478 270 aa17.02■□□□□ 0.32
SMG9-210ENST00000600097 RGSL1A5PLK6 1076 aa17.01■□□□□ 0.31
SMG9-210ENST00000600097 A6NCN8 305 aa17.01■□□□□ 0.31
SMG9-210ENST00000600097 MATN3O15232 486 aa17.01■□□□□ 0.31
SMG9-210ENST00000600097 CLDN7O95471 211 aa17.01■□□□□ 0.31
SMG9-210ENST00000600097 PRLP01236 227 aa17.01■□□□□ 0.31
SMG9-210ENST00000600097 ACP5P13686 325 aa17.01■□□□□ 0.31
SMG9-210ENST00000600097 IL4RP24394 825 aa17.01■□□□□ 0.31
SMG9-210ENST00000600097 DSC2Q02487 901 aa17.01■□□□□ 0.31
SMG9-210ENST00000600097 SLC25A11Q02978 314 aaKnown RBP17.01■□□□□ 0.31
SMG9-210ENST00000600097 GALNT2Q10471 571 aa17.01■□□□□ 0.31
SMG9-210ENST00000600097 SEPT6Q14141 434 aa17.01■□□□□ 0.31
SMG9-210ENST00000600097 MAP7Q14244 749 aa17.01■□□□□ 0.31
SMG9-210ENST00000600097 HENMT1Q5T8I9 393 aaKnown RBP17.01■□□□□ 0.31
SMG9-210ENST00000600097 UNC5BQ8IZJ1 945 aa17.01■□□□□ 0.31
SMG9-210ENST00000600097 STARD8Q92502 1023 aa17.01■□□□□ 0.31
SMG9-210ENST00000600097 FAM83DQ9H4H8 585 aa17.01■□□□□ 0.31
SMG9-210ENST00000600097 ZNF71Q9NQZ8 489 aaPredicted RBP17.01■□□□□ 0.31
SMG9-210ENST00000600097 RBM22Q9NW64 420 aaKnown RBP eCLIP17.01■□□□□ 0.31
SMG9-210ENST00000600097 TMEM63CQ9P1W3 806 aa17.01■□□□□ 0.31
SMG9-210ENST00000600097 CNOT6Q9ULM6 557 aaKnown RBP17.01■□□□□ 0.31
SMG9-210ENST00000600097 KCNK6Q9Y257 313 aa17.01■□□□□ 0.31
SMG9-210ENST00000600097 PCYT1BQ9Y5K3 369 aaPredicted RBP17.01■□□□□ 0.31
SMG9-210ENST00000600097 OAS3Q9Y6K5 1087 aaKnown RBP17.01■□□□□ 0.31
SMG9-210ENST00000600097 DOPEY2Q9Y3R5 2298 aa17.01■□□□□ 0.31
SMG9-210ENST00000600097 BSNQ9UPA5 3926 aa17.01■□□□□ 0.31
SMG9-210ENST00000600097 FLNCQ14315 2725 aa17.01■□□□□ 0.31
SMG9-210ENST00000600097 C1orf232A0A0U1RR37 186 aa17■□□□□ 0.31
SMG9-210ENST00000600097 LILRA5A6NI73 299 aa17■□□□□ 0.31
SMG9-210ENST00000600097 MFSD11O43934 449 aa17■□□□□ 0.31
SMG9-210ENST00000600097 DLGAP3O95886 979 aa17■□□□□ 0.31
SMG9-210ENST00000600097 NTRK1P04629 796 aa17■□□□□ 0.31
SMG9-210ENST00000600097 ANKRD34CP0C6C1 535 aa17■□□□□ 0.31
SMG9-210ENST00000600097 TCN2P20062 427 aa17■□□□□ 0.31
SMG9-210ENST00000600097 CCNCP24863 283 aa17■□□□□ 0.31
SMG9-210ENST00000600097 OAS2P29728 719 aaKnown RBP17■□□□□ 0.31
SMG9-210ENST00000600097 STAT5AP42229 794 aa17■□□□□ 0.31
SMG9-210ENST00000600097 MAPK9P45984 424 aa17■□□□□ 0.31
SMG9-210ENST00000600097 SPINT3P49223 89 aa17■□□□□ 0.31
SMG9-210ENST00000600097 IFI16Q16666 785 aaKnown RBP17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms