RNA–Protein interactions for RNA: ENST00000598359.5

SCAF1-203, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 662 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-203ENST00000598359 CCDC187A0A096LP49 1063 aa13.66□□□□□ -0.22
SCAF1-203ENST00000598359 B4GAT1O43505 415 aa13.66□□□□□ -0.22
SCAF1-203ENST00000598359 PSTPIP1O43586 416 aa13.66□□□□□ -0.22
SCAF1-203ENST00000598359 PMPCBO75439 489 aa13.66□□□□□ -0.22
SCAF1-203ENST00000598359 C1QL1O75973 258 aa13.66□□□□□ -0.22
SCAF1-203ENST00000598359 TNFSF15O95150 251 aa13.66□□□□□ -0.22
SCAF1-203ENST00000598359 EML2O95834 649 aa13.66□□□□□ -0.22
SCAF1-203ENST00000598359 PTPN3P26045 913 aa13.66□□□□□ -0.22
SCAF1-203ENST00000598359 HADHBP55084 474 aaKnown RBP13.66□□□□□ -0.22
SCAF1-203ENST00000598359 INHBCP55103 352 aa13.66□□□□□ -0.22
SCAF1-203ENST00000598359 PRKD1Q15139 912 aaPredicted RBP13.66□□□□□ -0.22
SCAF1-203ENST00000598359 NOMO1Q15155 1222 aa13.66□□□□□ -0.22
SCAF1-203ENST00000598359 SPA17Q15506 151 aa13.66□□□□□ -0.22
SCAF1-203ENST00000598359 AMZ1Q400G9 498 aa13.66□□□□□ -0.22
SCAF1-203ENST00000598359 PYCR3Q53H96 274 aa13.66□□□□□ -0.22
SCAF1-203ENST00000598359 ZNF648Q5T619 568 aaPredicted RBP13.66□□□□□ -0.22
SCAF1-203ENST00000598359 RAD9BQ6WBX8 426 aa13.66□□□□□ -0.22
SCAF1-203ENST00000598359 ZC3H18Q86VM9 953 aaKnown RBP13.66□□□□□ -0.22
SCAF1-203ENST00000598359 CCDC50Q8IVM0 306 aa13.66□□□□□ -0.22
SCAF1-203ENST00000598359 LSMEM2Q8N112 164 aa13.66□□□□□ -0.22
SCAF1-203ENST00000598359 ARL14Q8N4G2 192 aa13.66□□□□□ -0.22
SCAF1-203ENST00000598359 ZNF248Q8NDW4 579 aa13.66□□□□□ -0.22
SCAF1-203ENST00000598359 OR6C4Q8NGE1 309 aa13.66□□□□□ -0.22
SCAF1-203ENST00000598359 EXD1Q8NHP7 514 aa13.66□□□□□ -0.22
SCAF1-203ENST00000598359 TADA1Q96BN2 335 aa13.66□□□□□ -0.22
SCAF1-203ENST00000598359 SCARF2Q96GP6 870 aaPredicted RBP13.66□□□□□ -0.22
SCAF1-203ENST00000598359 OR2M4Q96R27 311 aa13.66□□□□□ -0.22
SCAF1-203ENST00000598359 UBL7Q96S82 380 aaPredicted RBP13.66□□□□□ -0.22
SCAF1-203ENST00000598359 HEMGNQ9BXL5 484 aa13.66□□□□□ -0.22
SCAF1-203ENST00000598359 ADGRE3Q9BY15 652 aa13.66□□□□□ -0.22
SCAF1-203ENST00000598359 SLC25A51Q9H1U9 297 aa13.66□□□□□ -0.22
SCAF1-203ENST00000598359 FAM83DQ9H4H8 585 aa13.66□□□□□ -0.22
SCAF1-203ENST00000598359 C10orf88Q9H8K7 445 aa13.66□□□□□ -0.22
SCAF1-203ENST00000598359 RDH14Q9HBH5 336 aa13.66□□□□□ -0.22
SCAF1-203ENST00000598359 THSD1Q9NS62 852 aa13.66□□□□□ -0.22
SCAF1-203ENST00000598359 TRMT1Q9NXH9 659 aaKnown RBP13.66□□□□□ -0.22
SCAF1-203ENST00000598359 DNPEPQ9ULA0 475 aa13.66□□□□□ -0.22
SCAF1-203ENST00000598359 DUSP10Q9Y6W6 482 aa13.66□□□□□ -0.22
SCAF1-203ENST00000598359 MYO18BQ8IUG5 2567 aa13.65□□□□□ -0.22
SCAF1-203ENST00000598359 hCG_1818297A0A087WSY0 165 aa13.65□□□□□ -0.22
SCAF1-203ENST00000598359 RHPN2P1A8MT19 583 aa13.65□□□□□ -0.22
SCAF1-203ENST00000598359 NUDT21O43809 227 aaKnown RBP13.65□□□□□ -0.22
SCAF1-203ENST00000598359 CCDC175P0C221 793 aa13.65□□□□□ -0.22
SCAF1-203ENST00000598359 PLA2G2AP14555 144 aa13.65□□□□□ -0.22
SCAF1-203ENST00000598359 ALDH4A1P30038 563 aa13.65□□□□□ -0.22
SCAF1-203ENST00000598359 CD68P34810 354 aaPredicted RBP13.65□□□□□ -0.22
SCAF1-203ENST00000598359 CYLC1P35663 651 aaPredicted RBP13.65□□□□□ -0.22
SCAF1-203ENST00000598359 ERVPABLB-1P60509 514 aa13.65□□□□□ -0.22
SCAF1-203ENST00000598359 B4GALNT1Q00973 533 aa13.65□□□□□ -0.22
SCAF1-203ENST00000598359 CDK18Q07002 472 aa13.65□□□□□ -0.22
SCAF1-203ENST00000598359 WASHC5Q12768 1159 aa13.65□□□□□ -0.22
SCAF1-203ENST00000598359 TFDP2Q14188 446 aa13.65□□□□□ -0.22
SCAF1-203ENST00000598359 TEX44Q53QW1 395 aa13.65□□□□□ -0.22
SCAF1-203ENST00000598359 HENMT1Q5T8I9 393 aaKnown RBP13.65□□□□□ -0.22
SCAF1-203ENST00000598359 USP53Q70EK8 1073 aa13.65□□□□□ -0.22
SCAF1-203ENST00000598359 RAB11FIP2Q7L804 512 aa13.65□□□□□ -0.22
SCAF1-203ENST00000598359 NLRP8Q86W28 1048 aa13.65□□□□□ -0.22
SCAF1-203ENST00000598359 C17orf82Q86X59 251 aaPredicted RBP13.65□□□□□ -0.22
SCAF1-203ENST00000598359 ZNF761Q86XN6 746 aaPredicted RBP13.65□□□□□ -0.22
SCAF1-203ENST00000598359 GALNT13Q8IUC8 556 aa13.65□□□□□ -0.22
SCAF1-203ENST00000598359 CCDC170Q8IYT3 715 aa13.65□□□□□ -0.22
SCAF1-203ENST00000598359 KATNAL2Q8IYT4 538 aa13.65□□□□□ -0.22
SCAF1-203ENST00000598359 NAGSQ8N159 534 aa13.65□□□□□ -0.22
SCAF1-203ENST00000598359 FBXO39Q8N4B4 442 aa13.65□□□□□ -0.22
SCAF1-203ENST00000598359 GPR26Q8NDV2 337 aa13.65□□□□□ -0.22
SCAF1-203ENST00000598359 CCHCR1Q8TD31 782 aa13.65□□□□□ -0.22
SCAF1-203ENST00000598359 TFB1MQ8WVM0 346 aaKnown RBP13.65□□□□□ -0.22
SCAF1-203ENST00000598359 KCNE4Q8WWG9 221 aa13.65□□□□□ -0.22
SCAF1-203ENST00000598359 SLC39A7Q92504 469 aa13.65□□□□□ -0.22
SCAF1-203ENST00000598359 GRAMD1AQ96CP6 724 aa13.65□□□□□ -0.22
SCAF1-203ENST00000598359 LIN37Q96GY3 246 aaPredicted RBP13.65□□□□□ -0.22
SCAF1-203ENST00000598359 TEKT5Q96M29 485 aa13.65□□□□□ -0.22
SCAF1-203ENST00000598359 FCRL3Q96P31 734 aaPredicted RBP13.65□□□□□ -0.22
SCAF1-203ENST00000598359 HERPUD2Q9BSE4 406 aa13.65□□□□□ -0.22
SCAF1-203ENST00000598359 CDH19Q9H159 772 aa13.65□□□□□ -0.22
SCAF1-203ENST00000598359 SEMA6CQ9H3T2 930 aa13.65□□□□□ -0.22
SCAF1-203ENST00000598359 PRORYQ9H606 182 aa13.65□□□□□ -0.22
SCAF1-203ENST00000598359 CPNE5Q9HCH3 593 aa13.65□□□□□ -0.22
SCAF1-203ENST00000598359 PKD2L2Q9NZM6 624 aa13.65□□□□□ -0.22
SCAF1-203ENST00000598359 ZNHIT2Q9UHR6 403 aa13.65□□□□□ -0.22
SCAF1-203ENST00000598359 REXO2Q9Y3B8 237 aaKnown RBP13.65□□□□□ -0.22
SCAF1-203ENST00000598359 ZNF711Q9Y462 761 aa13.65□□□□□ -0.22
SCAF1-203ENST00000598359 PCDHGA8Q9Y5G5 932 aa13.65□□□□□ -0.22
SCAF1-203ENST00000598359 SPO11Q9Y5K1 396 aa13.65□□□□□ -0.22
SCAF1-203ENST00000598359 ADGRG1Q9Y653 693 aa13.65□□□□□ -0.22
SCAF1-203ENST00000598359 ZNF462Q96JM2 2506 aa13.65□□□□□ -0.22
SCAF1-203ENST00000598359 UQCRHLA0A096LP55 91 aa13.64□□□□□ -0.23
SCAF1-203ENST00000598359 A0A0A6YYK5 440 aaPredicted RBP13.64□□□□□ -0.23
SCAF1-203ENST00000598359 CDRT15L2A8MXV6 281 aa13.64□□□□□ -0.23
SCAF1-203ENST00000598359 TK2O00142 265 aa13.64□□□□□ -0.23
SCAF1-203ENST00000598359 PLD2O14939 933 aa13.64□□□□□ -0.23
SCAF1-203ENST00000598359 AURKAO14965 403 aa13.64□□□□□ -0.23
SCAF1-203ENST00000598359 PPM1DO15297 605 aa13.64□□□□□ -0.23
SCAF1-203ENST00000598359 KLK10O43240 276 aa13.64□□□□□ -0.23
SCAF1-203ENST00000598359 DNAJC6O75061 913 aa13.64□□□□□ -0.23
SCAF1-203ENST00000598359 ZRANB2O95218 330 aaKnown RBP eCLIP13.64□□□□□ -0.23
SCAF1-203ENST00000598359 NDUFA10O95299 355 aa13.64□□□□□ -0.23
SCAF1-203ENST00000598359 UQCRHP07919 91 aa13.64□□□□□ -0.23
SCAF1-203ENST00000598359 ITIH1P19827 911 aa13.64□□□□□ -0.23
SCAF1-203ENST00000598359 NFKB1P19838 968 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms