RNA–Protein interactions for RNA: ENST00000593168.5

VMP1-217, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-217ENST00000593168 BANPQ8N9N5 519 aa13.41□□□□□ -0.26
VMP1-217ENST00000593168 RSPH9Q9H1X1 276 aaPredicted RBP13.41□□□□□ -0.26
VMP1-217ENST00000593168 KCNK9Q9NPC2 374 aa13.41□□□□□ -0.26
VMP1-217ENST00000593168 PCDH12Q9NPG4 1184 aa13.41□□□□□ -0.26
VMP1-217ENST00000593168 ZDHHC4Q9NPG8 344 aa13.41□□□□□ -0.26
VMP1-217ENST00000593168 RAD18Q9NS91 495 aa13.41□□□□□ -0.26
VMP1-217ENST00000593168 MARCH4Q9P2E8 410 aaPredicted RBP13.41□□□□□ -0.26
VMP1-217ENST00000593168 ADAM21Q9UKJ8 722 aa13.41□□□□□ -0.26
VMP1-217ENST00000593168 CORO1CQ9ULV4 474 aaPredicted RBP13.41□□□□□ -0.26
VMP1-217ENST00000593168 VPS9D1Q9Y2B5 631 aa13.41□□□□□ -0.26
VMP1-217ENST00000593168 MTO1Q9Y2Z2 717 aaKnown RBP13.41□□□□□ -0.26
VMP1-217ENST00000593168 A0A0U1RQS6 177 aa13.4□□□□□ -0.26
VMP1-217ENST00000593168 TMEM120BA0PK00 339 aa13.4□□□□□ -0.26
VMP1-217ENST00000593168 FAM47DPA6NHR8 397 aa13.4□□□□□ -0.26
VMP1-217ENST00000593168 PFDN6O15212 129 aa13.4□□□□□ -0.26
VMP1-217ENST00000593168 SYNCRIPO60506 623 aaKnown RBP13.4□□□□□ -0.26
VMP1-217ENST00000593168 HAUS5O94927 633 aa13.4□□□□□ -0.26
VMP1-217ENST00000593168 IL1BP01584 269 aa13.4□□□□□ -0.26
VMP1-217ENST00000593168 ALDOAP04075 364 aaKnown RBP13.4□□□□□ -0.26
VMP1-217ENST00000593168 PYGBP11216 843 aa13.4□□□□□ -0.26
VMP1-217ENST00000593168 BPIP17213 487 aa13.4□□□□□ -0.26
VMP1-217ENST00000593168 SPAM1P38567 509 aa13.4□□□□□ -0.26
VMP1-217ENST00000593168 SERPINB8P50452 374 aa13.4□□□□□ -0.26
VMP1-217ENST00000593168 ATP1A2P50993 1020 aa13.4□□□□□ -0.26
VMP1-217ENST00000593168 STC1P52823 247 aa13.4□□□□□ -0.26
VMP1-217ENST00000593168 GYS2P54840 703 aa13.4□□□□□ -0.26
VMP1-217ENST00000593168 CBX1P83916 185 aa13.4□□□□□ -0.26
VMP1-217ENST00000593168 CACNG1Q06432 222 aa13.4□□□□□ -0.26
VMP1-217ENST00000593168 HSF5Q4G112 596 aaPredicted RBP13.4□□□□□ -0.26
VMP1-217ENST00000593168 AARS2Q5JTZ9 985 aaKnown RBP13.4□□□□□ -0.26
VMP1-217ENST00000593168 ERAP2Q6P179 960 aa13.4□□□□□ -0.26
VMP1-217ENST00000593168 CERS6Q6ZMG9 384 aa13.4□□□□□ -0.26
VMP1-217ENST00000593168 ERN2Q76MJ5 926 aaKnown RBP13.4□□□□□ -0.26
VMP1-217ENST00000593168 LONP2Q86WA8 852 aa13.4□□□□□ -0.26
VMP1-217ENST00000593168 FAM160A2Q8N612 972 aaPredicted RBP13.4□□□□□ -0.26
VMP1-217ENST00000593168 DTX3LQ8TDB6 740 aa13.4□□□□□ -0.26
VMP1-217ENST00000593168 ARRDC3Q96B67 414 aa13.4□□□□□ -0.26
VMP1-217ENST00000593168 CABS1Q96KC9 395 aa13.4□□□□□ -0.26
VMP1-217ENST00000593168 SELENOSQ9BQE4 189 aa13.4□□□□□ -0.26
VMP1-217ENST00000593168 HDAC8Q9BY41 377 aa13.4□□□□□ -0.26
VMP1-217ENST00000593168 FBRSQ9HAH7 460 aa13.4□□□□□ -0.26
VMP1-217ENST00000593168 IL26Q9NPH9 171 aa13.4□□□□□ -0.26
VMP1-217ENST00000593168 FBXO6Q9NRD1 293 aaPredicted RBP13.4□□□□□ -0.26
VMP1-217ENST00000593168 INTS10Q9NVR2 710 aaKnown RBP13.4□□□□□ -0.26
VMP1-217ENST00000593168 MKS1Q9NXB0 559 aa13.4□□□□□ -0.26
VMP1-217ENST00000593168 PKD2L2Q9NZM6 624 aa13.4□□□□□ -0.26
VMP1-217ENST00000593168 RALYQ9UKM9 306 aaKnown RBP13.4□□□□□ -0.26
VMP1-217ENST00000593168 SLC30A1Q9Y6M5 507 aa13.4□□□□□ -0.26
VMP1-217ENST00000593168 CKAP5Q14008 2032 aa13.4□□□□□ -0.26
VMP1-217ENST00000593168 EML5Q05BV3 1969 aa13.4□□□□□ -0.27
VMP1-217ENST00000593168 GLYATL1P3A0A0U1RQE8 302 aa13.39□□□□□ -0.27
VMP1-217ENST00000593168 AGAP14A8MT82 685 aa13.39□□□□□ -0.27
VMP1-217ENST00000593168 A8MX80 341 aa13.39□□□□□ -0.27
VMP1-217ENST00000593168 PSMD11O00231 422 aa13.39□□□□□ -0.27
VMP1-217ENST00000593168 AREL1O15033 823 aa13.39□□□□□ -0.27
VMP1-217ENST00000593168 RNASEH1O60930 286 aaKnown RBP13.39□□□□□ -0.27
VMP1-217ENST00000593168 SPAG7O75391 227 aa13.39□□□□□ -0.27
VMP1-217ENST00000593168 SRP72O76094 671 aaKnown RBP13.39□□□□□ -0.27
VMP1-217ENST00000593168 MPOP05164 745 aa13.39□□□□□ -0.27
VMP1-217ENST00000593168 C1SP09871 688 aa13.39□□□□□ -0.27
VMP1-217ENST00000593168 C7P10643 843 aa13.39□□□□□ -0.27
VMP1-217ENST00000593168 PMLP29590 882 aa13.39□□□□□ -0.27
VMP1-217ENST00000593168 TYK2P29597 1187 aa13.39□□□□□ -0.27
VMP1-217ENST00000593168 CNR2P34972 360 aa13.39□□□□□ -0.27
VMP1-217ENST00000593168 MDH1P40925 334 aaKnown RBP13.39□□□□□ -0.27
VMP1-217ENST00000593168 WASP42768 502 aa13.39□□□□□ -0.27
VMP1-217ENST00000593168 CCT5P48643 541 aa13.39□□□□□ -0.27
VMP1-217ENST00000593168 SPINT3P49223 89 aa13.39□□□□□ -0.27
VMP1-217ENST00000593168 TTPAP49638 278 aa13.39□□□□□ -0.27
VMP1-217ENST00000593168 CSRP3P50461 194 aa13.39□□□□□ -0.27
VMP1-217ENST00000593168 SEC13P55735 322 aa13.39□□□□□ -0.27
VMP1-217ENST00000593168 ELP6Q0PNE2 266 aa13.39□□□□□ -0.27
VMP1-217ENST00000593168 RALGDSQ12967 914 aa13.39□□□□□ -0.27
VMP1-217ENST00000593168 MPP2Q14168 576 aa13.39□□□□□ -0.27
VMP1-217ENST00000593168 LRRC32Q14392 662 aa13.39□□□□□ -0.27
VMP1-217ENST00000593168 SEMA3AQ14563 771 aa13.39□□□□□ -0.27
VMP1-217ENST00000593168 STARD3Q14849 445 aa13.39□□□□□ -0.27
VMP1-217ENST00000593168 GPR33Q49SQ1 333 aa13.39□□□□□ -0.27
VMP1-217ENST00000593168 C2orf27AQ580R0 203 aa13.39□□□□□ -0.27
VMP1-217ENST00000593168 RNF187Q5TA31 235 aaPredicted RBP13.39□□□□□ -0.27
VMP1-217ENST00000593168 FBXL19Q6PCT2 694 aa13.39□□□□□ -0.27
VMP1-217ENST00000593168 CNSTQ6PJW8 725 aa13.39□□□□□ -0.27
VMP1-217ENST00000593168 SNX20Q7Z614 316 aa13.39□□□□□ -0.27
VMP1-217ENST00000593168 MMAAQ8IVH4 418 aaKnown RBP13.39□□□□□ -0.27
VMP1-217ENST00000593168 IL17RCQ8NAC3 791 aa13.39□□□□□ -0.27
VMP1-217ENST00000593168 OR2T3Q8NH03 318 aa13.39□□□□□ -0.27
VMP1-217ENST00000593168 DENND1AQ8TEH3 1009 aa13.39□□□□□ -0.27
VMP1-217ENST00000593168 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.39□□□□□ -0.27
VMP1-217ENST00000593168 RAB7BQ96AH8 199 aa13.39□□□□□ -0.27
VMP1-217ENST00000593168 CENPTQ96BT3 561 aa13.39□□□□□ -0.27
VMP1-217ENST00000593168 APOPT1Q96IL0 206 aa13.39□□□□□ -0.27
VMP1-217ENST00000593168 PLEKHG4BQ96PX9 1271 aa13.39□□□□□ -0.27
VMP1-217ENST00000593168 KLF6Q99612 283 aaPredicted RBP13.39□□□□□ -0.27
VMP1-217ENST00000593168 CDH19Q9H159 772 aa13.39□□□□□ -0.27
VMP1-217ENST00000593168 DYRK4Q9NR20 520 aa13.39□□□□□ -0.27
VMP1-217ENST00000593168 NKIRAS1Q9NYS0 192 aa13.39□□□□□ -0.27
VMP1-217ENST00000593168 NFKBIL1Q9UBC1 381 aaPredicted RBP13.39□□□□□ -0.27
VMP1-217ENST00000593168 TRBV5-4A0A0C4DH59 114 aa13.38□□□□□ -0.27
VMP1-217ENST00000593168 FAM95CA0A1B0GW59 222 aa13.38□□□□□ -0.27
VMP1-217ENST00000593168 GOLGA8RI6L899 631 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 97.3 ms