RNA–Protein interactions for RNA: ENST00000591534.5

BRCA1-226, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 1,282 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-226ENST00000591534 ECHDC3Q96DC8 303 aa9.43□□□□□ -0.9
BRCA1-226ENST00000591534 PDXPQ96GD0 296 aa9.43□□□□□ -0.9
BRCA1-226ENST00000591534 ZNF599Q96NL3 588 aa9.43□□□□□ -0.9
BRCA1-226ENST00000591534 SYT11Q9BT88 431 aa9.43□□□□□ -0.9
BRCA1-226ENST00000591534 TMEM168Q9H0V1 697 aa9.43□□□□□ -0.9
BRCA1-226ENST00000591534 DHX35Q9H5Z1 703 aaKnown RBP9.43□□□□□ -0.9
BRCA1-226ENST00000591534 CARS2Q9HA77 564 aaKnown RBP9.43□□□□□ -0.9
BRCA1-226ENST00000591534 PDFQ9HBH1 243 aa9.43□□□□□ -0.9
BRCA1-226ENST00000591534 LATS2Q9NRM7 1088 aa9.43□□□□□ -0.9
BRCA1-226ENST00000591534 STARD5Q9NSY2 213 aa9.43□□□□□ -0.9
BRCA1-226ENST00000591534 HAUS2Q9NVX0 235 aa9.43□□□□□ -0.9
BRCA1-226ENST00000591534 TRNAU1APQ9NX07 287 aaKnown RBP9.43□□□□□ -0.9
BRCA1-226ENST00000591534 IL17BQ9UHF5 180 aa9.43□□□□□ -0.9
BRCA1-226ENST00000591534 AP4E1Q9UPM8 1137 aa9.43□□□□□ -0.9
BRCA1-226ENST00000591534 CHD5Q8TDI0 1954 aa9.43□□□□□ -0.9
BRCA1-226ENST00000591534 TENM4Q6N022 2769 aa9.42□□□□□ -0.9
BRCA1-226ENST00000591534 TCRBV5S1A1TA0A578 114 aa9.42□□□□□ -0.9
BRCA1-226ENST00000591534 PRSS38A1L453 326 aa9.42□□□□□ -0.9
BRCA1-226ENST00000591534 IQCJ-SCHIP1C9J366 451 aaPredicted RBP9.42□□□□□ -0.9
BRCA1-226ENST00000591534 DFFAO00273 331 aa9.42□□□□□ -0.9
BRCA1-226ENST00000591534 NOBOXO60393 691 aa9.42□□□□□ -0.9
BRCA1-226ENST00000591534 SOCS5O75159 536 aa9.42□□□□□ -0.9
BRCA1-226ENST00000591534 CYP2A6P11509 494 aaPredicted RBP9.42□□□□□ -0.9
BRCA1-226ENST00000591534 GZMAP12544 262 aa9.42□□□□□ -0.9
BRCA1-226ENST00000591534 CCNB1P14635 433 aa9.42□□□□□ -0.9
BRCA1-226ENST00000591534 TNFAIP3P21580 790 aa9.42□□□□□ -0.9
BRCA1-226ENST00000591534 PSMA2P25787 234 aa9.42□□□□□ -0.9
BRCA1-226ENST00000591534 ALDH4A1P30038 563 aa9.42□□□□□ -0.9
BRCA1-226ENST00000591534 CSTF2P33240 577 aaKnown RBP eCLIP9.42□□□□□ -0.9
BRCA1-226ENST00000591534 MAN1A1P33908 653 aa9.42□□□□□ -0.9
BRCA1-226ENST00000591534 RPL7AP62424 266 aaKnown RBP9.42□□□□□ -0.9
BRCA1-226ENST00000591534 KIF5AQ12840 1032 aa9.42□□□□□ -0.9
BRCA1-226ENST00000591534 TUBB2AQ13885 445 aa9.42□□□□□ -0.9
BRCA1-226ENST00000591534 ZNF235Q14590 738 aa9.42□□□□□ -0.9
BRCA1-226ENST00000591534 TGIF1Q15583 401 aa9.42□□□□□ -0.9
BRCA1-226ENST00000591534 AMZ1Q400G9 498 aa9.42□□□□□ -0.9
BRCA1-226ENST00000591534 RALGPS1Q5JS13 557 aa9.42□□□□□ -0.9
BRCA1-226ENST00000591534 RFX8Q6ZV50 586 aa9.42□□□□□ -0.9
BRCA1-226ENST00000591534 KIAA1328Q86T90 577 aa9.42□□□□□ -0.9
BRCA1-226ENST00000591534 NETO2Q8NC67 525 aa9.42□□□□□ -0.9
BRCA1-226ENST00000591534 PLA2G15Q8NCC3 412 aa9.42□□□□□ -0.9
BRCA1-226ENST00000591534 AGBL5Q8NDL9 886 aa9.42□□□□□ -0.9
BRCA1-226ENST00000591534 EXTL1Q92935 676 aa9.42□□□□□ -0.9
BRCA1-226ENST00000591534 NUS1Q96E22 293 aa9.42□□□□□ -0.9
BRCA1-226ENST00000591534 CELF6Q96J87 481 aaKnown RBP9.42□□□□□ -0.9
BRCA1-226ENST00000591534 PSKH2Q96QS6 385 aa9.42□□□□□ -0.9
BRCA1-226ENST00000591534 TAAR9Q96RI9 348 aa9.42□□□□□ -0.9
BRCA1-226ENST00000591534 TUBB2BQ9BVA1 445 aa9.42□□□□□ -0.9
BRCA1-226ENST00000591534 ASPSCR1Q9BZE9 553 aa9.42□□□□□ -0.9
BRCA1-226ENST00000591534 SLC39A8Q9C0K1 460 aa9.42□□□□□ -0.9
BRCA1-226ENST00000591534 ADNPQ9H2P0 1102 aa9.42□□□□□ -0.9
BRCA1-226ENST00000591534 HAUS4Q9H6D7 363 aa9.42□□□□□ -0.9
BRCA1-226ENST00000591534 ZWILCHQ9H900 591 aa9.42□□□□□ -0.9
BRCA1-226ENST00000591534 FGF22Q9HCT0 170 aa9.42□□□□□ -0.9
BRCA1-226ENST00000591534 EPN1Q9Y6I3 576 aaPredicted RBP9.42□□□□□ -0.9
BRCA1-226ENST00000591534 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP9.42□□□□□ -0.9
BRCA1-226ENST00000591534 TDRD6O60522 2096 aaKnown RBP9.41□□□□□ -0.9
BRCA1-226ENST00000591534 PSMD11O00231 422 aa9.41□□□□□ -0.9
BRCA1-226ENST00000591534 KIF5CO60282 957 aa9.41□□□□□ -0.9
BRCA1-226ENST00000591534 ZNF500O60304 480 aaPredicted RBP9.41□□□□□ -0.9
BRCA1-226ENST00000591534 NDUFA10O95299 355 aa9.41□□□□□ -0.9
BRCA1-226ENST00000591534 PRKCGP05129 697 aa9.41□□□□□ -0.9
BRCA1-226ENST00000591534 PYGLP06737 847 aa9.41□□□□□ -0.9
BRCA1-226ENST00000591534 MYBL1P10243 752 aa9.41□□□□□ -0.9
BRCA1-226ENST00000591534 ERCC2P18074 760 aa9.41□□□□□ -0.9
BRCA1-226ENST00000591534 ITIH1P19827 911 aa9.41□□□□□ -0.9
BRCA1-226ENST00000591534 TEAD1P28347 426 aa9.41□□□□□ -0.9
BRCA1-226ENST00000591534 HCAR3P49019 387 aa9.41□□□□□ -0.9
BRCA1-226ENST00000591534 PPM1FP49593 454 aaPredicted RBP9.41□□□□□ -0.9
BRCA1-226ENST00000591534 GPLD1P80108 840 aa9.41□□□□□ -0.9
BRCA1-226ENST00000591534 B4GALNT1Q00973 533 aa9.41□□□□□ -0.9
BRCA1-226ENST00000591534 OGDHQ02218 1023 aa9.41□□□□□ -0.9
BRCA1-226ENST00000591534 SLC18A3Q16572 532 aa9.41□□□□□ -0.9
BRCA1-226ENST00000591534 LINC00303Q3SY05 128 aa9.41□□□□□ -0.9
BRCA1-226ENST00000591534 PPP6R3Q5H9R7 873 aaPredicted RBP9.41□□□□□ -0.9
BRCA1-226ENST00000591534 USP45Q70EL2 814 aa9.41□□□□□ -0.9
BRCA1-226ENST00000591534 ZFAND4Q86XD8 727 aa9.41□□□□□ -0.9
BRCA1-226ENST00000591534 DTX1Q86Y01 620 aa9.41□□□□□ -0.9
BRCA1-226ENST00000591534 SLITRK4Q8IW52 837 aa9.41□□□□□ -0.9
BRCA1-226ENST00000591534 GALNT12Q8IXK2 581 aa9.41□□□□□ -0.9
BRCA1-226ENST00000591534 MCOLN2Q8IZK6 566 aa9.41□□□□□ -0.9
BRCA1-226ENST00000591534 RNF10Q8N5U6 811 aaKnown RBP9.41□□□□□ -0.9
BRCA1-226ENST00000591534 IL22RA1Q8N6P7 574 aa9.41□□□□□ -0.9
BRCA1-226ENST00000591534 EXD3Q8N9H8 876 aa9.41□□□□□ -0.9
BRCA1-226ENST00000591534 PDCD6IPQ8WUM4 868 aaKnown RBP9.41□□□□□ -0.9
BRCA1-226ENST00000591534 AHCYL2Q96HN2 611 aaKnown RBP9.41□□□□□ -0.9
BRCA1-226ENST00000591534 CATSPER2Q96P56 530 aa9.41□□□□□ -0.9
BRCA1-226ENST00000591534 ALS2CR12Q96Q35 445 aa9.41□□□□□ -0.9
BRCA1-226ENST00000591534 EFHD1Q9BUP0 239 aa9.41□□□□□ -0.9
BRCA1-226ENST00000591534 CDH19Q9H159 772 aa9.41□□□□□ -0.9
BRCA1-226ENST00000591534 SLC25A18Q9H1K4 315 aa9.41□□□□□ -0.9
BRCA1-226ENST00000591534 STN1Q9H668 368 aaKnown RBP9.41□□□□□ -0.9
BRCA1-226ENST00000591534 NHEJ1Q9H9Q4 299 aaPredicted RBP9.41□□□□□ -0.9
BRCA1-226ENST00000591534 MRPL47Q9HD33 250 aaKnown RBP9.41□□□□□ -0.9
BRCA1-226ENST00000591534 MRPL40Q9NQ50 206 aaKnown RBP9.41□□□□□ -0.9
BRCA1-226ENST00000591534 GEMIN8Q9NWZ8 242 aaKnown RBP9.41□□□□□ -0.9
BRCA1-226ENST00000591534 PHTF1Q9UMS5 762 aa9.41□□□□□ -0.9
BRCA1-226ENST00000591534 PCDHGA3Q9Y5H0 932 aa9.41□□□□□ -0.9
BRCA1-226ENST00000591534 SCINQ9Y6U3 715 aa9.41□□□□□ -0.9
BRCA1-226ENST00000591534 COL6A6A6NMZ7 2263 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms