RNA–Protein interactions for RNA: ENST00000587604.1

DNMT1-213, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 513 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-213ENST00000587604 RMI1Q9H9A7 625 aa13.94□□□□□ -0.18
DNMT1-213ENST00000587604 RCOR3Q9P2K3 495 aaPredicted RBP13.94□□□□□ -0.18
DNMT1-213ENST00000587604 TBC1D29Q9UFV1 150 aa13.94□□□□□ -0.18
DNMT1-213ENST00000587604 ANAPC2Q9UJX6 822 aa13.94□□□□□ -0.18
DNMT1-213ENST00000587604 CNOT6Q9ULM6 557 aaKnown RBP13.94□□□□□ -0.18
DNMT1-213ENST00000587604 USP9YO00507 2555 aaPredicted RBP13.93□□□□□ -0.18
DNMT1-213ENST00000587604 LOC101059948A0A1B0GTJ6 334 aa13.93□□□□□ -0.18
DNMT1-213ENST00000587604 CLDN7O95471 211 aa13.93□□□□□ -0.18
DNMT1-213ENST00000587604 ATP1A1P05023 1023 aaKnown RBP13.93□□□□□ -0.18
DNMT1-213ENST00000587604 IL4RP24394 825 aa13.93□□□□□ -0.18
DNMT1-213ENST00000587604 CASRP41180 1078 aa13.93□□□□□ -0.18
DNMT1-213ENST00000587604 GARSP41250 739 aaKnown RBP13.93□□□□□ -0.18
DNMT1-213ENST00000587604 EPHA4P54764 986 aa13.93□□□□□ -0.18
DNMT1-213ENST00000587604 SLC25A11Q02978 314 aaKnown RBP13.93□□□□□ -0.18
DNMT1-213ENST00000587604 ABHD18Q0P651 414 aa13.93□□□□□ -0.18
DNMT1-213ENST00000587604 NFATC2Q13469 925 aa13.93□□□□□ -0.18
DNMT1-213ENST00000587604 KRT81Q14533 505 aa13.93□□□□□ -0.18
DNMT1-213ENST00000587604 IHHQ14623 411 aa13.93□□□□□ -0.18
DNMT1-213ENST00000587604 CCDC122Q5T0U0 273 aa13.93□□□□□ -0.18
DNMT1-213ENST00000587604 ALG1LQ6GMV1 187 aa13.93□□□□□ -0.18
DNMT1-213ENST00000587604 CHST15Q7LFX5 561 aaPredicted RBP13.93□□□□□ -0.18
DNMT1-213ENST00000587604 TIPARPQ7Z3E1 657 aaKnown RBP13.93□□□□□ -0.18
DNMT1-213ENST00000587604 SLC9B2Q86UD5 537 aa13.93□□□□□ -0.18
DNMT1-213ENST00000587604 AOPEPQ8N6M6 819 aa13.93□□□□□ -0.18
DNMT1-213ENST00000587604 NIPA2Q8N8Q9 360 aa13.93□□□□□ -0.18
DNMT1-213ENST00000587604 MAML1Q92585 1016 aa13.93□□□□□ -0.18
DNMT1-213ENST00000587604 HERPUD2Q9BSE4 406 aa13.93□□□□□ -0.18
DNMT1-213ENST00000587604 TDRD1Q9BXT4 1180 aaKnown RBP13.93□□□□□ -0.18
DNMT1-213ENST00000587604 LDHAL6BQ9BYZ2 381 aaPredicted RBP13.93□□□□□ -0.18
DNMT1-213ENST00000587604 EPB41L1Q9H4G0 881 aa13.93□□□□□ -0.18
DNMT1-213ENST00000587604 AMACRQ9UHK6 382 aa13.93□□□□□ -0.18
DNMT1-213ENST00000587604 CHKBQ9Y259 395 aa13.93□□□□□ -0.18
DNMT1-213ENST00000587604 TMEM184BQ9Y519 407 aaPredicted RBP13.93□□□□□ -0.18
DNMT1-213ENST00000587604 PCYT1BQ9Y5K3 369 aaPredicted RBP13.93□□□□□ -0.18
DNMT1-213ENST00000587604 SPTBN1Q01082 2364 aaKnown RBP13.92□□□□□ -0.18
DNMT1-213ENST00000587604 KIR2DS5A0A0G2JLQ3 304 aa13.92□□□□□ -0.18
DNMT1-213ENST00000587604 A0A0G2JNG1 304 aa13.92□□□□□ -0.18
DNMT1-213ENST00000587604 A6NCN8 305 aa13.92□□□□□ -0.18
DNMT1-213ENST00000587604 KIR2DS3K7RE56 304 aa13.92□□□□□ -0.18
DNMT1-213ENST00000587604 MATN3O15232 486 aa13.92□□□□□ -0.18
DNMT1-213ENST00000587604 STK17BO94768 372 aa13.92□□□□□ -0.18
DNMT1-213ENST00000587604 PRLP01236 227 aa13.92□□□□□ -0.18
DNMT1-213ENST00000587604 SKILP12757 684 aa13.92□□□□□ -0.18
DNMT1-213ENST00000587604 SLC2A4P14672 509 aa13.92□□□□□ -0.18
DNMT1-213ENST00000587604 CA4P22748 312 aa13.92□□□□□ -0.18
DNMT1-213ENST00000587604 ZNF165P49910 485 aa13.92□□□□□ -0.18
DNMT1-213ENST00000587604 RPL26P61254 145 aaKnown RBP13.92□□□□□ -0.18
DNMT1-213ENST00000587604 MC1RQ01726 317 aa13.92□□□□□ -0.18
DNMT1-213ENST00000587604 DSC2Q02487 901 aa13.92□□□□□ -0.18
DNMT1-213ENST00000587604 GALNT2Q10471 571 aa13.92□□□□□ -0.18
DNMT1-213ENST00000587604 CDC20Q12834 499 aa13.92□□□□□ -0.18
DNMT1-213ENST00000587604 UBAP2LQ14157 1087 aaKnown RBP13.92□□□□□ -0.18
DNMT1-213ENST00000587604 KIR2DS5Q14953 304 aa13.92□□□□□ -0.18
DNMT1-213ENST00000587604 FILIP1LQ4L180 1135 aa13.92□□□□□ -0.18
DNMT1-213ENST00000587604 CRTC2Q53ET0 693 aaPredicted RBP13.92□□□□□ -0.18
DNMT1-213ENST00000587604 TIGD7Q6NT04 549 aaPredicted RBP13.92□□□□□ -0.18
DNMT1-213ENST00000587604 LYSMD3Q7Z3D4 306 aa13.92□□□□□ -0.18
DNMT1-213ENST00000587604 KDELC2Q7Z4H8 507 aa13.92□□□□□ -0.18
DNMT1-213ENST00000587604 UNC5BQ8IZJ1 945 aa13.92□□□□□ -0.18
DNMT1-213ENST00000587604 C9orf43Q8TAL5 461 aaPredicted RBP13.92□□□□□ -0.18
DNMT1-213ENST00000587604 FAM71BQ8TC56 605 aa13.92□□□□□ -0.18
DNMT1-213ENST00000587604 APOBEC4Q8WW27 367 aaKnown RBP13.92□□□□□ -0.18
DNMT1-213ENST00000587604 FATE1Q969F0 183 aa13.92□□□□□ -0.18
DNMT1-213ENST00000587604 WDR24Q96S15 920 aa13.92□□□□□ -0.18
DNMT1-213ENST00000587604 LYSMD1Q96S90 227 aa13.92□□□□□ -0.18
DNMT1-213ENST00000587604 NAT10Q9H0A0 1025 aaKnown RBP13.92□□□□□ -0.18
DNMT1-213ENST00000587604 APMAPQ9HDC9 416 aa13.92□□□□□ -0.18
DNMT1-213ENST00000587604 ZNF71Q9NQZ8 489 aaPredicted RBP13.92□□□□□ -0.18
DNMT1-213ENST00000587604 HAUS2Q9NVX0 235 aa13.92□□□□□ -0.18
DNMT1-213ENST00000587604 RBM22Q9NW64 420 aaKnown RBP eCLIP13.92□□□□□ -0.18
DNMT1-213ENST00000587604 ANKMY1Q9P2S6 941 aa13.92□□□□□ -0.18
DNMT1-213ENST00000587604 IP6K2Q9UHH9 426 aa13.92□□□□□ -0.18
DNMT1-213ENST00000587604 RPL26L1Q9UNX3 145 aaKnown RBP13.92□□□□□ -0.18
DNMT1-213ENST00000587604 PRKAB1Q9Y478 270 aa13.92□□□□□ -0.18
DNMT1-213ENST00000587604 OAS3Q9Y6K5 1087 aaKnown RBP13.92□□□□□ -0.18
DNMT1-213ENST00000587604 SPTAN1Q13813 2472 aaKnown RBP13.91□□□□□ -0.18
DNMT1-213ENST00000587604 RGSL1A5PLK6 1076 aa13.91□□□□□ -0.18
DNMT1-213ENST00000587604 OR5K4A6NMS3 321 aa13.91□□□□□ -0.18
DNMT1-213ENST00000587604 POLR1CO15160 346 aaPredicted RBP13.91□□□□□ -0.18
DNMT1-213ENST00000587604 PRKAR1AP10644 381 aa13.91□□□□□ -0.18
DNMT1-213ENST00000587604 ACP5P13686 325 aa13.91□□□□□ -0.18
DNMT1-213ENST00000587604 F3P13726 295 aa13.91□□□□□ -0.18
DNMT1-213ENST00000587604 CCNCP24863 283 aa13.91□□□□□ -0.18
DNMT1-213ENST00000587604 SPINT3P49223 89 aa13.91□□□□□ -0.18
DNMT1-213ENST00000587604 FOXK1P85037 733 aa13.91□□□□□ -0.18
DNMT1-213ENST00000587604 MMRN1Q13201 1228 aa13.91□□□□□ -0.18
DNMT1-213ENST00000587604 PAFAH1B3Q15102 231 aaKnown RBP13.91□□□□□ -0.18
DNMT1-213ENST00000587604 IFI16Q16666 785 aaKnown RBP13.91□□□□□ -0.18
DNMT1-213ENST00000587604 HENMT1Q5T8I9 393 aaKnown RBP13.91□□□□□ -0.18
DNMT1-213ENST00000587604 PLXDC1Q8IUK5 500 aa13.91□□□□□ -0.18
DNMT1-213ENST00000587604 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.91□□□□□ -0.18
DNMT1-213ENST00000587604 AVL9Q8NBF6 648 aa13.91□□□□□ -0.18
DNMT1-213ENST00000587604 ARRDC2Q8TBH0 407 aa13.91□□□□□ -0.18
DNMT1-213ENST00000587604 ABHD17AQ96GS6 310 aa13.91□□□□□ -0.18
DNMT1-213ENST00000587604 TSGA13Q96PP4 275 aa13.91□□□□□ -0.18
DNMT1-213ENST00000587604 FAM83DQ9H4H8 585 aa13.91□□□□□ -0.18
DNMT1-213ENST00000587604 PCDH9Q9HC56 1237 aa13.91□□□□□ -0.18
DNMT1-213ENST00000587604 CPNE7Q9UBL6 633 aa13.91□□□□□ -0.18
DNMT1-213ENST00000587604 KCNK6Q9Y257 313 aa13.91□□□□□ -0.18
DNMT1-213ENST00000587604 USP9XQ93008 2570 aaPredicted RBP13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms