RNA–Protein interactions for RNA: ENST00000586417.5

ATG4D-204, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 2

Gene ATG4D, Length 1,752 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-204ENST00000586417 HEXDCQ8WVB3 486 aa20.34■□□□□ 0.85
ATG4D-204ENST00000586417 ERLEC1Q96DZ1 483 aa20.34■□□□□ 0.85
ATG4D-204ENST00000586417 RMDN2Q96LZ7 410 aa20.34■□□□□ 0.85
ATG4D-204ENST00000586417 FAM96AQ9H5X1 160 aa20.34■□□□□ 0.85
ATG4D-204ENST00000586417 GPAMQ9HCL2 828 aa20.34■□□□□ 0.85
ATG4D-204ENST00000586417 NPHS2Q9NP85 383 aa20.34■□□□□ 0.85
ATG4D-204ENST00000586417 CACNA2D2Q9NY47 1150 aa20.34■□□□□ 0.85
ATG4D-204ENST00000586417 CPSF2Q9P2I0 782 aaKnown RBP20.34■□□□□ 0.85
ATG4D-204ENST00000586417 THAP10Q9P2Z0 257 aaPredicted RBP20.34■□□□□ 0.85
ATG4D-204ENST00000586417 WNT16Q9UBV4 365 aa20.34■□□□□ 0.85
ATG4D-204ENST00000586417 FBXL21Q9UKT6 434 aa20.34■□□□□ 0.85
ATG4D-204ENST00000586417 SERPINE1P05121 402 aa20.33■□□□□ 0.84
ATG4D-204ENST00000586417 NNMTP40261 264 aa20.33■□□□□ 0.84
ATG4D-204ENST00000586417 IL12RB1P42701 662 aa20.33■□□□□ 0.84
ATG4D-204ENST00000586417 WASP42768 502 aa20.33■□□□□ 0.84
ATG4D-204ENST00000586417 C2orf27AQ580R0 203 aa20.33■□□□□ 0.84
ATG4D-204ENST00000586417 ZRANB3Q5FWF4 1079 aa20.33■□□□□ 0.84
ATG4D-204ENST00000586417 GDPD4Q6W3E5 623 aa20.33■□□□□ 0.84
ATG4D-204ENST00000586417 ZYG11AQ6WRX3 759 aa20.33■□□□□ 0.84
ATG4D-204ENST00000586417 NUDT18Q6ZVK8 323 aa20.33■□□□□ 0.84
ATG4D-204ENST00000586417 CCDC91Q7Z6B0 441 aa20.33■□□□□ 0.84
ATG4D-204ENST00000586417 TBC1D1Q86TI0 1168 aaPredicted RBP20.33■□□□□ 0.84
ATG4D-204ENST00000586417 ZNF513Q8N8E2 541 aaPredicted RBP20.33■□□□□ 0.84
ATG4D-204ENST00000586417 ANKRD49Q8WVL7 239 aa20.33■□□□□ 0.84
ATG4D-204ENST00000586417 HEPHQ9BQS7 1158 aa20.33■□□□□ 0.84
ATG4D-204ENST00000586417 TMEM245Q9H330 911 aa20.33■□□□□ 0.84
ATG4D-204ENST00000586417 XPR1Q9UBH6 696 aa20.33■□□□□ 0.84
ATG4D-204ENST00000586417 MID2Q9UJV3 735 aa20.33■□□□□ 0.84
ATG4D-204ENST00000586417 FNDC3AQ9Y2H6 1198 aaKnown RBP20.33■□□□□ 0.84
ATG4D-204ENST00000586417 MED16Q9Y2X0 877 aa20.33■□□□□ 0.84
ATG4D-204ENST00000586417 CCT8L1PA6NM43 557 aa20.32■□□□□ 0.84
ATG4D-204ENST00000586417 GPR39O43194 453 aa20.32■□□□□ 0.84
ATG4D-204ENST00000586417 NDUFS3O75489 264 aa20.32■□□□□ 0.84
ATG4D-204ENST00000586417 TROVE2P10155 538 aaKnown RBP eCLIP20.32■□□□□ 0.84
ATG4D-204ENST00000586417 RALBP11234 206 aa20.32■□□□□ 0.84
ATG4D-204ENST00000586417 DRD1P21728 446 aa20.32■□□□□ 0.84
ATG4D-204ENST00000586417 RECQLP46063 649 aaPredicted RBP20.32■□□□□ 0.84
ATG4D-204ENST00000586417 TTPAP49638 278 aa20.32■□□□□ 0.84
ATG4D-204ENST00000586417 ST8SIA6P61647 398 aa20.32■□□□□ 0.84
ATG4D-204ENST00000586417 CCINQ13939 588 aa20.32■□□□□ 0.84
ATG4D-204ENST00000586417 ATG14Q6ZNE5 492 aa20.32■□□□□ 0.84
ATG4D-204ENST00000586417 PHF6Q8IWS0 365 aaKnown RBP eCLIP20.32■□□□□ 0.84
ATG4D-204ENST00000586417 SIX5Q8N196 739 aa20.32■□□□□ 0.84
ATG4D-204ENST00000586417 RFWD2Q8NHY2 731 aa20.32■□□□□ 0.84
ATG4D-204ENST00000586417 GRIN3AQ8TCU5 1115 aa20.32■□□□□ 0.84
ATG4D-204ENST00000586417 UCMAQ8WVF2 138 aa20.32■□□□□ 0.84
ATG4D-204ENST00000586417 CCT6BQ92526 530 aa20.32■□□□□ 0.84
ATG4D-204ENST00000586417 KLHL32Q96NJ5 620 aa20.32■□□□□ 0.84
ATG4D-204ENST00000586417 PLCD4Q9BRC7 762 aa20.32■□□□□ 0.84
ATG4D-204ENST00000586417 UNKQ9C0B0 810 aaKnown RBP20.32■□□□□ 0.84
ATG4D-204ENST00000586417 THAP1Q9NVV9 213 aa20.32■□□□□ 0.84
ATG4D-204ENST00000586417 SLC8A2Q9UPR5 921 aa20.32■□□□□ 0.84
ATG4D-204ENST00000586417 A0A1W2PQ67 120 aa20.31■□□□□ 0.84
ATG4D-204ENST00000586417 UBA6A0AVT1 1052 aaPredicted RBP20.31■□□□□ 0.84
ATG4D-204ENST00000586417 ITM2AO43736 263 aa20.31■□□□□ 0.84
ATG4D-204ENST00000586417 HNRNPLP14866 589 aaKnown RBP eCLIP20.31■□□□□ 0.84
ATG4D-204ENST00000586417 BPIP17213 487 aa20.31■□□□□ 0.84
ATG4D-204ENST00000586417 LHCGRP22888 699 aa20.31■□□□□ 0.84
ATG4D-204ENST00000586417 GRK2P25098 689 aa20.31■□□□□ 0.84
ATG4D-204ENST00000586417 ARRB2P32121 409 aa20.31■□□□□ 0.84
ATG4D-204ENST00000586417 SLC26A3P40879 764 aa20.31■□□□□ 0.84
ATG4D-204ENST00000586417 CACNG1Q06432 222 aa20.31■□□□□ 0.84
ATG4D-204ENST00000586417 ITGA9Q13797 1035 aa20.31■□□□□ 0.84
ATG4D-204ENST00000586417 CSHL1Q14406 222 aa20.31■□□□□ 0.84
ATG4D-204ENST00000586417 RNF187Q5TA31 235 aaPredicted RBP20.31■□□□□ 0.84
ATG4D-204ENST00000586417 SERPINA13PQ6UXR4 307 aa20.31■□□□□ 0.84
ATG4D-204ENST00000586417 ZNF852Q6ZMS4 543 aa20.31■□□□□ 0.84
ATG4D-204ENST00000586417 USP45Q70EL2 814 aa20.31■□□□□ 0.84
ATG4D-204ENST00000586417 PPP1R14CQ8TAE6 165 aa20.31■□□□□ 0.84
ATG4D-204ENST00000586417 ZNF398Q8TD17 642 aa20.31■□□□□ 0.84
ATG4D-204ENST00000586417 MSANTD3Q96H12 275 aa20.31■□□□□ 0.84
ATG4D-204ENST00000586417 SCYL1Q96KG9 808 aa20.31■□□□□ 0.84
ATG4D-204ENST00000586417 BIRC8Q96P09 236 aa20.31■□□□□ 0.84
ATG4D-204ENST00000586417 POPDC3Q9HBV1 291 aa20.31■□□□□ 0.84
ATG4D-204ENST00000586417 IL26Q9NPH9 171 aa20.31■□□□□ 0.84
ATG4D-204ENST00000586417 ABCF3Q9NUQ8 709 aa20.31■□□□□ 0.84
ATG4D-204ENST00000586417 OXSMQ9NWU1 459 aa20.31■□□□□ 0.84
ATG4D-204ENST00000586417 VPS9D1Q9Y2B5 631 aa20.31■□□□□ 0.84
ATG4D-204ENST00000586417 TSPAN11A1L157 253 aa20.31■□□□□ 0.84
ATG4D-204ENST00000586417 A8MX80 341 aa20.31■□□□□ 0.84
ATG4D-204ENST00000586417 CTSLP07711 333 aa20.31■□□□□ 0.84
ATG4D-204ENST00000586417 LTA4HP09960 611 aaKnown RBP20.31■□□□□ 0.84
ATG4D-204ENST00000586417 CCDC166P0CW27 439 aa20.31■□□□□ 0.84
ATG4D-204ENST00000586417 MYL2P10916 166 aa20.31■□□□□ 0.84
ATG4D-204ENST00000586417 SEMG2Q02383 582 aa20.31■□□□□ 0.84
ATG4D-204ENST00000586417 FAM83EQ2M2I3 478 aa20.31■□□□□ 0.84
ATG4D-204ENST00000586417 SETMARQ53H47 684 aaPredicted RBP20.31■□□□□ 0.84
ATG4D-204ENST00000586417 AARS2Q5JTZ9 985 aaKnown RBP20.31■□□□□ 0.84
ATG4D-204ENST00000586417 TRPM8Q7Z2W7 1104 aa20.31■□□□□ 0.84
ATG4D-204ENST00000586417 UBALD2Q8IYN6 164 aa20.31■□□□□ 0.84
ATG4D-204ENST00000586417 ZNF687Q8N1G0 1237 aa20.31■□□□□ 0.84
ATG4D-204ENST00000586417 CBARPQ8N350 705 aaPredicted RBP20.31■□□□□ 0.84
ATG4D-204ENST00000586417 TRIM55Q9BYV6 548 aa20.31■□□□□ 0.84
ATG4D-204ENST00000586417 MRPL46Q9H2W6 279 aaKnown RBP20.31■□□□□ 0.84
ATG4D-204ENST00000586417 KCNK13Q9HB14 408 aa20.31■□□□□ 0.84
ATG4D-204ENST00000586417 SLC30A1Q9Y6M5 507 aa20.31■□□□□ 0.84
ATG4D-204ENST00000586417 TTC28Q96AY4 2481 aa20.3■□□□□ 0.84
ATG4D-204ENST00000586417 MAN2B1O00754 1011 aa20.3■□□□□ 0.84
ATG4D-204ENST00000586417 OR1I1O60431 355 aa20.3■□□□□ 0.84
ATG4D-204ENST00000586417 LYPLA1O75608 230 aaPredicted RBP20.3■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms