RNA–Protein interactions for RNA: ENST00000583667.1

GGA3-217, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 4

Gene GGA3, Length 531 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-217ENST00000583667 C2orf81A6NN90 581 aa11.92□□□□□ -0.5
GGA3-217ENST00000583667 FOXO6A8MYZ6 492 aa11.92□□□□□ -0.5
GGA3-217ENST00000583667 AHSGP02765 367 aa11.92□□□□□ -0.5
GGA3-217ENST00000583667 CFIP05156 583 aa11.92□□□□□ -0.5
GGA3-217ENST00000583667 ATP5BP06576 529 aaKnown RBP11.92□□□□□ -0.5
GGA3-217ENST00000583667 DLDP09622 509 aaKnown RBP11.92□□□□□ -0.5
GGA3-217ENST00000583667 DHRS4L1P0CG22 281 aa11.92□□□□□ -0.5
GGA3-217ENST00000583667 DRD1P21728 446 aa11.92□□□□□ -0.5
GGA3-217ENST00000583667 LPOP22079 712 aaPredicted RBP11.92□□□□□ -0.5
GGA3-217ENST00000583667 SERPINA4P29622 427 aa11.92□□□□□ -0.5
GGA3-217ENST00000583667 NNMTP40261 264 aa11.92□□□□□ -0.5
GGA3-217ENST00000583667 CCT5P48643 541 aa11.92□□□□□ -0.5
GGA3-217ENST00000583667 DGKGP49619 791 aa11.92□□□□□ -0.5
GGA3-217ENST00000583667 ZNF140P52738 457 aaPredicted RBP11.92□□□□□ -0.5
GGA3-217ENST00000583667 WDR4P57081 412 aaKnown RBP11.92□□□□□ -0.5
GGA3-217ENST00000583667 RAD51Q06609 339 aa11.92□□□□□ -0.5
GGA3-217ENST00000583667 THOC5Q13769 683 aaKnown RBP11.92□□□□□ -0.5
GGA3-217ENST00000583667 DLG2Q15700 870 aa11.92□□□□□ -0.5
GGA3-217ENST00000583667 TMEM215Q68D42 235 aa11.92□□□□□ -0.5
GGA3-217ENST00000583667 C22orf39Q6P5X5 142 aa11.92□□□□□ -0.5
GGA3-217ENST00000583667 LPCAT2Q7L5N7 544 aa11.92□□□□□ -0.5
GGA3-217ENST00000583667 ZC3HC1Q86WB0 502 aaKnown RBP11.92□□□□□ -0.5
GGA3-217ENST00000583667 TTC30BQ8N4P2 665 aa11.92□□□□□ -0.5
GGA3-217ENST00000583667 MINDY1Q8N5J2 469 aa11.92□□□□□ -0.5
GGA3-217ENST00000583667 TSTD1Q8NFU3 115 aa11.92□□□□□ -0.5
GGA3-217ENST00000583667 FRS2Q8WU20 508 aa11.92□□□□□ -0.5
GGA3-217ENST00000583667 CDKN2AIPNLQ96HQ2 116 aa11.92□□□□□ -0.5
GGA3-217ENST00000583667 EXOC2Q96KP1 924 aa11.92□□□□□ -0.5
GGA3-217ENST00000583667 TCF12Q99081 682 aa11.92□□□□□ -0.5
GGA3-217ENST00000583667 AGAP2Q99490 1192 aa11.92□□□□□ -0.5
GGA3-217ENST00000583667 GPR22Q99680 433 aa11.92□□□□□ -0.5
GGA3-217ENST00000583667 VPS11Q9H270 941 aa11.92□□□□□ -0.5
GGA3-217ENST00000583667 ECT2Q9H8V3 914 aa11.92□□□□□ -0.5
GGA3-217ENST00000583667 IARS2Q9NSE4 1012 aaKnown RBP11.92□□□□□ -0.5
GGA3-217ENST00000583667 DNAAF2Q9NVR5 837 aaKnown RBP11.92□□□□□ -0.5
GGA3-217ENST00000583667 SLC2A6Q9UGQ3 507 aa11.92□□□□□ -0.5
GGA3-217ENST00000583667 DCDC2Q9UHG0 476 aa11.92□□□□□ -0.5
GGA3-217ENST00000583667 CORO1CQ9ULV4 474 aaPredicted RBP11.92□□□□□ -0.5
GGA3-217ENST00000583667 SPO11Q9Y5K1 396 aa11.92□□□□□ -0.5
GGA3-217ENST00000583667 KIF26AQ9ULI4 1882 aaPredicted RBP11.91□□□□□ -0.5
GGA3-217ENST00000583667 A0A0J9YYE9 177 aa11.91□□□□□ -0.5
GGA3-217ENST00000583667 TULP3O75386 442 aa11.91□□□□□ -0.5
GGA3-217ENST00000583667 WISP1O95388 367 aa11.91□□□□□ -0.5
GGA3-217ENST00000583667 TRBC1P01850 177 aa11.91□□□□□ -0.5
GGA3-217ENST00000583667 ALDOAP04075 364 aaKnown RBP11.91□□□□□ -0.5
GGA3-217ENST00000583667 NTRK1P04629 796 aa11.91□□□□□ -0.5
GGA3-217ENST00000583667 MPOP05164 745 aa11.91□□□□□ -0.5
GGA3-217ENST00000583667 GSTA1P08263 222 aa11.91□□□□□ -0.5
GGA3-217ENST00000583667 PYGBP11216 843 aa11.91□□□□□ -0.5
GGA3-217ENST00000583667 GABRB3P28472 473 aa11.91□□□□□ -0.5
GGA3-217ENST00000583667 RPA3P35244 121 aaPredicted RBP11.91□□□□□ -0.5
GGA3-217ENST00000583667 HMGCLP35914 325 aa11.91□□□□□ -0.5
GGA3-217ENST00000583667 CTSOP43234 321 aaPredicted RBP11.91□□□□□ -0.5
GGA3-217ENST00000583667 ETV4P43268 484 aa11.91□□□□□ -0.5
GGA3-217ENST00000583667 IL9RQ01113 521 aa11.91□□□□□ -0.5
GGA3-217ENST00000583667 CAMK2BQ13554 666 aa11.91□□□□□ -0.5
GGA3-217ENST00000583667 RUNX3Q13761 415 aa11.91□□□□□ -0.5
GGA3-217ENST00000583667 GALNT3Q14435 633 aa11.91□□□□□ -0.5
GGA3-217ENST00000583667 DBN1Q16643 649 aa11.91□□□□□ -0.5
GGA3-217ENST00000583667 CDKN3Q16667 212 aa11.91□□□□□ -0.5
GGA3-217ENST00000583667 GEN1Q17RS7 908 aa11.91□□□□□ -0.5
GGA3-217ENST00000583667 FBXO43Q4G163 708 aa11.91□□□□□ -0.5
GGA3-217ENST00000583667 PREPLQ4J6C6 727 aaPredicted RBP11.91□□□□□ -0.5
GGA3-217ENST00000583667 ATXN7L2Q5T6C5 722 aaPredicted RBP11.91□□□□□ -0.5
GGA3-217ENST00000583667 MROH9Q5TGP6 573 aa11.91□□□□□ -0.5
GGA3-217ENST00000583667 PEAR1Q5VY43 1037 aaPredicted RBP11.91□□□□□ -0.5
GGA3-217ENST00000583667 NAIF1Q69YI7 327 aaPredicted RBP11.91□□□□□ -0.5
GGA3-217ENST00000583667 KYAT3Q6YP21 454 aaKnown RBP11.91□□□□□ -0.5
GGA3-217ENST00000583667 CCDC91Q7Z6B0 441 aa11.91□□□□□ -0.5
GGA3-217ENST00000583667 NDUFAF2Q8N183 169 aa11.91□□□□□ -0.5
GGA3-217ENST00000583667 C4orf33Q8N1A6 199 aa11.91□□□□□ -0.5
GGA3-217ENST00000583667 CBARPQ8N350 705 aaPredicted RBP11.91□□□□□ -0.5
GGA3-217ENST00000583667 PHTF2Q8N3S3 785 aa11.91□□□□□ -0.5
GGA3-217ENST00000583667 CPA6Q8N4T0 437 aa11.91□□□□□ -0.5
GGA3-217ENST00000583667 FRMD1Q8N878 549 aa11.91□□□□□ -0.5
GGA3-217ENST00000583667 BLOC1S5Q8TDH9 187 aa11.91□□□□□ -0.5
GGA3-217ENST00000583667 EZH1Q92800 747 aaPredicted RBP11.91□□□□□ -0.5
GGA3-217ENST00000583667 PTPRN2Q92932 1015 aa11.91□□□□□ -0.5
GGA3-217ENST00000583667 HDAC10Q969S8 669 aa11.91□□□□□ -0.5
GGA3-217ENST00000583667 MYO19Q96H55 970 aa11.91□□□□□ -0.5
GGA3-217ENST00000583667 MAGEB18Q96M61 343 aa11.91□□□□□ -0.5
GGA3-217ENST00000583667 ZNF317Q96PQ6 595 aaPredicted RBP11.91□□□□□ -0.5
GGA3-217ENST00000583667 SUV39H2Q9H5I1 410 aa11.91□□□□□ -0.5
GGA3-217ENST00000583667 CAPN10Q9HC96 672 aa11.91□□□□□ -0.5
GGA3-217ENST00000583667 HPS4Q9NQG7 708 aa11.91□□□□□ -0.5
GGA3-217ENST00000583667 ELOVL2Q9NXB9 296 aa11.91□□□□□ -0.5
GGA3-217ENST00000583667 DEC1Q9P2X7 70 aa11.91□□□□□ -0.5
GGA3-217ENST00000583667 HECAQ9UBI9 543 aaPredicted RBP11.91□□□□□ -0.5
GGA3-217ENST00000583667 SLCO3A1Q9UIG8 710 aa11.91□□□□□ -0.5
GGA3-217ENST00000583667 FBXO5Q9UKT4 447 aa11.91□□□□□ -0.5
GGA3-217ENST00000583667 PHTF1Q9UMS5 762 aa11.91□□□□□ -0.5
GGA3-217ENST00000583667 PLLPQ9Y342 182 aa11.91□□□□□ -0.5
GGA3-217ENST00000583667 TEP1Q99973 2627 aaKnown RBP11.91□□□□□ -0.5
GGA3-217ENST00000583667 ATXN2Q99700 1313 aaKnown RBP11.9□□□□□ -0.5
GGA3-217ENST00000583667 TSPAN11A1L157 253 aa11.9□□□□□ -0.5
GGA3-217ENST00000583667 PALM2-AKAP2B1ALY0 433 aaPredicted RBP11.9□□□□□ -0.5
GGA3-217ENST00000583667 COPEO14579 308 aa11.9□□□□□ -0.5
GGA3-217ENST00000583667 COL6A2P12110 1019 aa11.9□□□□□ -0.5
GGA3-217ENST00000583667 ARSAP15289 507 aa11.9□□□□□ -0.5
GGA3-217ENST00000583667 OGNP20774 298 aaKnown RBP11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms