RNA–Protein interactions for RNA: ENST00000583363.5

CDK5RAP3-228, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 558 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-228ENST00000583363 FNDC3AQ9Y2H6 1198 aaKnown RBP16.26■□□□□ 0.19
CDK5RAP3-228ENST00000583363 SLC30A1Q9Y6M5 507 aa16.26■□□□□ 0.19
CDK5RAP3-228ENST00000583363 CACNA1BQ00975 2339 aa16.25■□□□□ 0.19
CDK5RAP3-228ENST00000583363 AGAP14A8MT82 685 aa16.25■□□□□ 0.19
CDK5RAP3-228ENST00000583363 UGT1A9O60656 530 aa16.25■□□□□ 0.19
CDK5RAP3-228ENST00000583363 TCEA3O75764 348 aa16.25■□□□□ 0.19
CDK5RAP3-228ENST00000583363 PIAS1O75925 651 aa16.25■□□□□ 0.19
CDK5RAP3-228ENST00000583363 PRAMEF1O95521 474 aa16.25■□□□□ 0.19
CDK5RAP3-228ENST00000583363 PRSS56P0CW18 603 aa16.25■□□□□ 0.19
CDK5RAP3-228ENST00000583363 UGT1A6P19224 532 aa16.25■□□□□ 0.19
CDK5RAP3-228ENST00000583363 UGT1A1P22309 533 aa16.25■□□□□ 0.19
CDK5RAP3-228ENST00000583363 UGT1A4P22310 534 aa16.25■□□□□ 0.19
CDK5RAP3-228ENST00000583363 TGM1P22735 817 aa16.25■□□□□ 0.19
CDK5RAP3-228ENST00000583363 CA5AP35218 305 aa16.25■□□□□ 0.19
CDK5RAP3-228ENST00000583363 UGT1A3P35503 534 aa16.25■□□□□ 0.19
CDK5RAP3-228ENST00000583363 UGT1A5P35504 534 aa16.25■□□□□ 0.19
CDK5RAP3-228ENST00000583363 CDKN1CP49918 316 aaPredicted RBP16.25■□□□□ 0.19
CDK5RAP3-228ENST00000583363 PPP2CBP62714 309 aa16.25■□□□□ 0.19
CDK5RAP3-228ENST00000583363 PPP2CAP67775 309 aa16.25■□□□□ 0.19
CDK5RAP3-228ENST00000583363 KLHL38Q2WGJ6 581 aa16.25■□□□□ 0.19
CDK5RAP3-228ENST00000583363 GPR33Q49SQ1 333 aa16.25■□□□□ 0.19
CDK5RAP3-228ENST00000583363 USP39Q53GS9 565 aaKnown RBP16.25■□□□□ 0.19
CDK5RAP3-228ENST00000583363 ZRANB3Q5FWF4 1079 aa16.25■□□□□ 0.19
CDK5RAP3-228ENST00000583363 FAM160A2Q8N612 972 aaPredicted RBP16.25■□□□□ 0.19
CDK5RAP3-228ENST00000583363 PPM1NQ8N819 430 aa16.25■□□□□ 0.19
CDK5RAP3-228ENST00000583363 C2CD4AQ8NCU7 369 aaPredicted RBP16.25■□□□□ 0.19
CDK5RAP3-228ENST00000583363 SCG3Q8WXD2 468 aaKnown RBP16.25■□□□□ 0.19
CDK5RAP3-228ENST00000583363 KLK6Q92876 244 aa16.25■□□□□ 0.19
CDK5RAP3-228ENST00000583363 FAM167BQ9BTA0 163 aa16.25■□□□□ 0.19
CDK5RAP3-228ENST00000583363 SPATA16Q9BXB7 569 aa16.25■□□□□ 0.19
CDK5RAP3-228ENST00000583363 GPR174Q9BXC1 333 aa16.25■□□□□ 0.19
CDK5RAP3-228ENST00000583363 C6orf106Q9H6K1 298 aaPredicted RBP16.25■□□□□ 0.19
CDK5RAP3-228ENST00000583363 ASB8Q9H765 288 aa16.25■□□□□ 0.19
CDK5RAP3-228ENST00000583363 UGT1A7Q9HAW7 530 aa16.25■□□□□ 0.19
CDK5RAP3-228ENST00000583363 UGT1A10Q9HAW8 530 aa16.25■□□□□ 0.19
CDK5RAP3-228ENST00000583363 UGT1A8Q9HAW9 530 aa16.25■□□□□ 0.19
CDK5RAP3-228ENST00000583363 MARCH4Q9P2E8 410 aaPredicted RBP16.25■□□□□ 0.19
CDK5RAP3-228ENST00000583363 FETUBQ9UGM5 382 aa16.25■□□□□ 0.19
CDK5RAP3-228ENST00000583363 MBD1Q9UIS9 605 aaPredicted RBP16.25■□□□□ 0.19
CDK5RAP3-228ENST00000583363 TPRP12270 2363 aaKnown RBP16.24■□□□□ 0.19
CDK5RAP3-228ENST00000583363 SCN8AQ9UQD0 1980 aa16.24■□□□□ 0.19
CDK5RAP3-228ENST00000583363 TRBV5-4A0A0C4DH59 114 aa16.24■□□□□ 0.19
CDK5RAP3-228ENST00000583363 MAP2K7O14733 419 aa16.24■□□□□ 0.19
CDK5RAP3-228ENST00000583363 ITGALP20701 1170 aa16.24■□□□□ 0.19
CDK5RAP3-228ENST00000583363 OGNP20774 298 aaKnown RBP16.24■□□□□ 0.19
CDK5RAP3-228ENST00000583363 GCAP28676 217 aa16.24■□□□□ 0.19
CDK5RAP3-228ENST00000583363 CCR5P51681 352 aa16.24■□□□□ 0.19
CDK5RAP3-228ENST00000583363 CTBP1Q13363 440 aa16.24■□□□□ 0.19
CDK5RAP3-228ENST00000583363 NFATC2Q13469 925 aa16.24■□□□□ 0.19
CDK5RAP3-228ENST00000583363 NAB1Q13506 487 aa16.24■□□□□ 0.19
CDK5RAP3-228ENST00000583363 ITGA9Q13797 1035 aa16.24■□□□□ 0.19
CDK5RAP3-228ENST00000583363 SEMA3AQ14563 771 aa16.24■□□□□ 0.19
CDK5RAP3-228ENST00000583363 EFTUD2Q15029 972 aaKnown RBP eCLIP16.24■□□□□ 0.197e-16■□□□□ 10
CDK5RAP3-228ENST00000583363 WSCD2Q2TBF2 565 aa16.24■□□□□ 0.19
CDK5RAP3-228ENST00000583363 ATP13A5Q4VNC0 1218 aa16.24■□□□□ 0.19
CDK5RAP3-228ENST00000583363 KIAA0895LQ68EN5 471 aa16.24■□□□□ 0.19
CDK5RAP3-228ENST00000583363 MRNIPQ6NTE8 343 aa16.24■□□□□ 0.19
CDK5RAP3-228ENST00000583363 PSAPL1Q6NUJ1 521 aa16.24■□□□□ 0.19
CDK5RAP3-228ENST00000583363 LRIG3Q6UXM1 1119 aa16.24■□□□□ 0.19
CDK5RAP3-228ENST00000583363 MARK2Q7KZI7 788 aaKnown RBP16.24■□□□□ 0.19
CDK5RAP3-228ENST00000583363 SDCCAG8Q86SQ7 713 aaPredicted RBP16.24■□□□□ 0.19
CDK5RAP3-228ENST00000583363 WDR5BQ86VZ2 330 aa16.24■□□□□ 0.19
CDK5RAP3-228ENST00000583363 SLC26A11Q86WA9 606 aa16.24■□□□□ 0.19
CDK5RAP3-228ENST00000583363 LRRC6Q86X45 466 aa16.24■□□□□ 0.19
CDK5RAP3-228ENST00000583363 CILP2Q8IUL8 1156 aa16.24■□□□□ 0.19
CDK5RAP3-228ENST00000583363 DENND6AQ8IWF6 608 aa16.24■□□□□ 0.19
CDK5RAP3-228ENST00000583363 CTAGE3PQ8IX95 158 aa16.24■□□□□ 0.19
CDK5RAP3-228ENST00000583363 PIANPQ8IYJ0 282 aa16.24■□□□□ 0.19
CDK5RAP3-228ENST00000583363 TP53I13Q8NBR0 393 aaPredicted RBP16.24■□□□□ 0.19
CDK5RAP3-228ENST00000583363 OR2W6PQ8NHA6 318 aa16.24■□□□□ 0.19
CDK5RAP3-228ENST00000583363 GABPB2Q8TAK5 448 aaPredicted RBP16.24■□□□□ 0.19
CDK5RAP3-228ENST00000583363 CENPTQ96BT3 561 aa16.24■□□□□ 0.19
CDK5RAP3-228ENST00000583363 CNTNAP3BQ96NU0 1288 aa16.24■□□□□ 0.19
CDK5RAP3-228ENST00000583363 ZIM3Q96PE6 472 aa16.24■□□□□ 0.19
CDK5RAP3-228ENST00000583363 LENG8Q96PV6 779 aaPredicted RBP16.24■□□□□ 0.19
CDK5RAP3-228ENST00000583363 DHRS4Q9BTZ2 278 aa16.24■□□□□ 0.19
CDK5RAP3-228ENST00000583363 ZSCAN5AQ9BUG6 496 aa16.24■□□□□ 0.19
CDK5RAP3-228ENST00000583363 TMEM109Q9BVC6 243 aa16.24■□□□□ 0.19
CDK5RAP3-228ENST00000583363 CNTNAP3Q9BZ76 1288 aa16.24■□□□□ 0.19
CDK5RAP3-228ENST00000583363 ROPN1BQ9BZX4 212 aaPredicted RBP16.24■□□□□ 0.19
CDK5RAP3-228ENST00000583363 ROPN1Q9HAT0 212 aaPredicted RBP16.24■□□□□ 0.19
CDK5RAP3-228ENST00000583363 ZNF446Q9NWS9 450 aa16.24■□□□□ 0.19
CDK5RAP3-228ENST00000583363 NSMCE4AQ9NXX6 385 aa16.24■□□□□ 0.19
CDK5RAP3-228ENST00000583363 ZFATQ9P243 1243 aa16.24■□□□□ 0.19
CDK5RAP3-228ENST00000583363 FBXO5Q9UKT4 447 aa16.24■□□□□ 0.19
CDK5RAP3-228ENST00000583363 TMPRSS11EQ9UL52 423 aa16.24■□□□□ 0.19
CDK5RAP3-228ENST00000583363 INVSQ9Y283 1065 aa16.24■□□□□ 0.19
CDK5RAP3-228ENST00000583363 DOCK9Q9BZ29 2069 aa16.23■□□□□ 0.19
CDK5RAP3-228ENST00000583363 EPG5Q9HCE0 2579 aa16.23■□□□□ 0.19
CDK5RAP3-228ENST00000583363 EXOC1LA0A1B0GW35 172 aa16.23■□□□□ 0.19
CDK5RAP3-228ENST00000583363 POC1B-GALNT4F8VUJ3 575 aa16.23■□□□□ 0.19
CDK5RAP3-228ENST00000583363 LATO43561 262 aa16.23■□□□□ 0.19
CDK5RAP3-228ENST00000583363 S1PR4O95977 384 aa16.23■□□□□ 0.19
CDK5RAP3-228ENST00000583363 AHSGP02765 367 aa16.23■□□□□ 0.19
CDK5RAP3-228ENST00000583363 GABRB3P28472 473 aa16.23■□□□□ 0.19
CDK5RAP3-228ENST00000583363 MAT2AP31153 395 aaKnown RBP16.23■□□□□ 0.19
CDK5RAP3-228ENST00000583363 SLC1A2P43004 574 aa16.23■□□□□ 0.19
CDK5RAP3-228ENST00000583363 MSH2P43246 934 aa16.23■□□□□ 0.19
CDK5RAP3-228ENST00000583363 FNTBP49356 437 aa16.23■□□□□ 0.19
CDK5RAP3-228ENST00000583363 EIF3BP55884 814 aaKnown RBP16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms