RNA–Protein interactions for RNA: ENST00000577625.5

RNF43-202, Transcript of ring finger protein 43, humanhuman

TSL 2 BASIC

Gene RNF43, Length 2,198 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-202ENST00000577625 C2orf16Q68DN1 1984 aa13.77□□□□□ -0.21
RNF43-202ENST00000577625 NUP210Q8TEM1 1887 aaPredicted RBP13.76□□□□□ -0.21
RNF43-202ENST00000577625 LDB2O43679 373 aa13.76□□□□□ -0.21
RNF43-202ENST00000577625 CCNT2O60583 730 aaKnown RBP13.76□□□□□ -0.21
RNF43-202ENST00000577625 ADAM23O75077 832 aa13.76□□□□□ -0.21
RNF43-202ENST00000577625 FGF19O95750 216 aa13.76□□□□□ -0.21
RNF43-202ENST00000577625 NDST3O95803 873 aa13.76□□□□□ -0.21
RNF43-202ENST00000577625 ZNF12P17014 697 aa13.76□□□□□ -0.21
RNF43-202ENST00000577625 NFKBIAP25963 317 aa13.76□□□□□ -0.21
RNF43-202ENST00000577625 DDX6P26196 483 aaKnown RBP eCLIP13.76□□□□□ -0.212e-6■■■■□ 22.1
RNF43-202ENST00000577625 PPARGP37231 505 aaPredicted RBP13.76□□□□□ -0.21
RNF43-202ENST00000577625 NUP107P57740 925 aa13.76□□□□□ -0.21
RNF43-202ENST00000577625 KDSRQ06136 332 aa13.76□□□□□ -0.21
RNF43-202ENST00000577625 C16orf72Q14CZ0 275 aa13.76□□□□□ -0.21
RNF43-202ENST00000577625 GRAMD1BQ3KR37 738 aa13.76□□□□□ -0.21
RNF43-202ENST00000577625 MPPE1Q53F39 396 aa13.76□□□□□ -0.21
RNF43-202ENST00000577625 FASTKD1Q53R41 847 aaKnown RBP13.76□□□□□ -0.21
RNF43-202ENST00000577625 MPP7Q5T2T1 576 aa13.76□□□□□ -0.21
RNF43-202ENST00000577625 OGFRL1Q5TC84 451 aaPredicted RBP13.76□□□□□ -0.21
RNF43-202ENST00000577625 TPGS1Q6ZTW0 290 aa13.76□□□□□ -0.21
RNF43-202ENST00000577625 HTATIP2Q9BUP3 242 aa13.76□□□□□ -0.21
RNF43-202ENST00000577625 SCUBE2Q9NQ36 999 aa13.76□□□□□ -0.21
RNF43-202ENST00000577625 TBC1D23Q9NUY8 699 aa13.76□□□□□ -0.21
RNF43-202ENST00000577625 LHX3Q9UBR4 397 aa13.76□□□□□ -0.21
RNF43-202ENST00000577625 FBXO5Q9UKT4 447 aa13.76□□□□□ -0.21
RNF43-202ENST00000577625 SLC39A10Q9ULF5 831 aa13.76□□□□□ -0.21
RNF43-202ENST00000577625 CLEC4EQ9ULY5 219 aa13.76□□□□□ -0.21
RNF43-202ENST00000577625 SLC7A4O43246 635 aa13.76□□□□□ -0.21
RNF43-202ENST00000577625 ITM2AO43736 263 aa13.76□□□□□ -0.21
RNF43-202ENST00000577625 DNAJA2O60884 412 aa13.76□□□□□ -0.21
RNF43-202ENST00000577625 ATP5BP06576 529 aaKnown RBP13.76□□□□□ -0.21
RNF43-202ENST00000577625 HNRNPA1P09651 372 aaKnown RBP eCLIP13.76□□□□□ -0.21
RNF43-202ENST00000577625 GMPRP36959 345 aa13.76□□□□□ -0.21
RNF43-202ENST00000577625 AVPR1AP37288 418 aa13.76□□□□□ -0.21
RNF43-202ENST00000577625 BCAP31P51572 246 aa13.76□□□□□ -0.21
RNF43-202ENST00000577625 ACVR1Q04771 509 aa13.76□□□□□ -0.21
RNF43-202ENST00000577625 DLG2Q15700 870 aa13.76□□□□□ -0.21
RNF43-202ENST00000577625 GALNT7Q86SF2 657 aa13.76□□□□□ -0.21
RNF43-202ENST00000577625 APCDD1Q8J025 514 aa13.76□□□□□ -0.21
RNF43-202ENST00000577625 PLD6Q8N2A8 252 aaKnown RBP13.76□□□□□ -0.21
RNF43-202ENST00000577625 TDRD1Q9BXT4 1180 aaKnown RBP13.76□□□□□ -0.21
RNF43-202ENST00000577625 TASP1Q9H6P5 420 aa13.76□□□□□ -0.21
RNF43-202ENST00000577625 ANKRD6Q9Y2G4 727 aa13.76□□□□□ -0.21
RNF43-202ENST00000577625 ARIH1Q9Y4X5 557 aaPredicted RBP13.76□□□□□ -0.21
RNF43-202ENST00000577625 KCTD3Q9Y597 815 aa13.76□□□□□ -0.21
RNF43-202ENST00000577625 E2F8A0AVK6 867 aa13.75□□□□□ -0.21
RNF43-202ENST00000577625 SNNO75324 88 aaPredicted RBP13.75□□□□□ -0.21
RNF43-202ENST00000577625 PRLP01236 227 aa13.75□□□□□ -0.21
RNF43-202ENST00000577625 RXRGP48443 463 aa13.75□□□□□ -0.21
RNF43-202ENST00000577625 NTHL1P78549 312 aa13.75□□□□□ -0.21
RNF43-202ENST00000577625 MYBPC1Q00872 1141 aa13.75□□□□□ -0.21
RNF43-202ENST00000577625 CCNIQ14094 377 aa13.75□□□□□ -0.21
RNF43-202ENST00000577625 USP10Q14694 798 aaKnown RBP13.75□□□□□ -0.21
RNF43-202ENST00000577625 PCLAFQ15004 111 aa13.75□□□□□ -0.21
RNF43-202ENST00000577625 INO80DQ53TQ3 878 aaPredicted RBP13.75□□□□□ -0.21
RNF43-202ENST00000577625 PRSS36Q5K4E3 855 aa13.75□□□□□ -0.21
RNF43-202ENST00000577625 CES4AQ5XG92 561 aa13.75□□□□□ -0.21
RNF43-202ENST00000577625 BRSK1Q8TDC3 778 aa13.75□□□□□ -0.21
RNF43-202ENST00000577625 BLOC1S5Q8TDH9 187 aa13.75□□□□□ -0.21
RNF43-202ENST00000577625 USP13Q92995 863 aaPredicted RBP13.75□□□□□ -0.21
RNF43-202ENST00000577625 MFSD1Q9H3U5 465 aa13.75□□□□□ -0.21
RNF43-202ENST00000577625 ZNF358Q9NW07 568 aa13.75□□□□□ -0.21
RNF43-202ENST00000577625 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.75□□□□□ -0.21
RNF43-202ENST00000577625 SCHIP1Q9P0W5 487 aaPredicted RBP13.75□□□□□ -0.21
RNF43-202ENST00000577625 COPG2Q9UBF2 871 aa13.75□□□□□ -0.21
RNF43-202ENST00000577625 RIMKLBQ9ULI2 386 aa13.75□□□□□ -0.21
RNF43-202ENST00000577625 ARL5AQ9Y689 179 aa13.75□□□□□ -0.21
RNF43-202ENST00000577625 CCDC195A0A1B0GUA6 201 aa13.75□□□□□ -0.21
RNF43-202ENST00000577625 FAM95CA0A1B0GW59 222 aa13.75□□□□□ -0.21
RNF43-202ENST00000577625 PER2O15055 1255 aa13.75□□□□□ -0.21
RNF43-202ENST00000577625 XYLBO75191 536 aa13.75□□□□□ -0.21
RNF43-202ENST00000577625 MT-CO1P00395 513 aa13.75□□□□□ -0.21
RNF43-202ENST00000577625 PIRTP0C851 137 aa13.75□□□□□ -0.21
RNF43-202ENST00000577625 ENTPD1P49961 510 aa13.75□□□□□ -0.21
RNF43-202ENST00000577625 ARSDP51689 593 aa13.75□□□□□ -0.21
RNF43-202ENST00000577625 NSUN2Q08J23 767 aaKnown RBP eCLIP13.75□□□□□ -0.21
RNF43-202ENST00000577625 LMAN2Q12907 356 aa13.75□□□□□ -0.21
RNF43-202ENST00000577625 ARHGAP15Q53QZ3 475 aa13.75□□□□□ -0.21
RNF43-202ENST00000577625 DEPDC1Q5TB30 811 aa13.75□□□□□ -0.21
RNF43-202ENST00000577625 ZNF697Q5TEC3 545 aa13.75□□□□□ -0.21
RNF43-202ENST00000577625 MBLAC2Q68D91 279 aa13.75□□□□□ -0.21
RNF43-202ENST00000577625 TRPC4APQ8TEL6 797 aa13.75□□□□□ -0.21
RNF43-202ENST00000577625 DCUN1D1Q96GG9 259 aa13.75□□□□□ -0.21
RNF43-202ENST00000577625 PRPF18Q99633 342 aaKnown RBP13.75□□□□□ -0.21
RNF43-202ENST00000577625 HAUS8Q9BT25 410 aa13.75□□□□□ -0.21
RNF43-202ENST00000577625 FCF1Q9Y324 198 aaKnown RBP13.75□□□□□ -0.21
RNF43-202ENST00000577625 CAPN8A6NHC0 703 aa13.74□□□□□ -0.21
RNF43-202ENST00000577625 PRAMEF12O95522 483 aa13.74□□□□□ -0.21
RNF43-202ENST00000577625 OXSR1O95747 527 aaPredicted RBP13.74□□□□□ -0.21
RNF43-202ENST00000577625 FAM58BPP0C7Q3 252 aa13.74□□□□□ -0.21
RNF43-202ENST00000577625 OCM2P0CE71 109 aa13.74□□□□□ -0.21
RNF43-202ENST00000577625 OCMP0CE72 109 aaPredicted RBP13.74□□□□□ -0.21
RNF43-202ENST00000577625 FGF3P11487 239 aaPredicted RBP13.74□□□□□ -0.21
RNF43-202ENST00000577625 CPOXP36551 454 aa13.74□□□□□ -0.21
RNF43-202ENST00000577625 STT3AP46977 705 aa13.74□□□□□ -0.21
RNF43-202ENST00000577625 LEPRP48357 1165 aaKnown RBP13.74□□□□□ -0.21
RNF43-202ENST00000577625 PRAMEP78395 509 aa13.74□□□□□ -0.21
RNF43-202ENST00000577625 IRF9Q00978 393 aa13.74□□□□□ -0.21
RNF43-202ENST00000577625 BTKQ06187 659 aa13.74□□□□□ -0.21
RNF43-202ENST00000577625 STX3Q13277 289 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms