RNA–Protein interactions for RNA: ENST00000574755.5

VPS33B-208, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2

Gene VPS33B, Length 2,356 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-208ENST00000574755 XIAPP98170 497 aa13.96□□□□□ -0.17
VPS33B-208ENST00000574755 CACNG1Q06432 222 aa13.96□□□□□ -0.17
VPS33B-208ENST00000574755 TAF11Q15544 211 aa13.96□□□□□ -0.17
VPS33B-208ENST00000574755 PPP1R3AQ16821 1122 aa13.96□□□□□ -0.17
VPS33B-208ENST00000574755 TCHHL1Q5QJ38 904 aaPredicted RBP13.96□□□□□ -0.17
VPS33B-208ENST00000574755 FBXO46Q6PJ61 603 aaPredicted RBP13.96□□□□□ -0.17
VPS33B-208ENST00000574755 HPS6Q86YV9 775 aa13.96□□□□□ -0.17
VPS33B-208ENST00000574755 CMTM8Q8IZV2 173 aa13.96□□□□□ -0.17
VPS33B-208ENST00000574755 FBXW8Q8N3Y1 598 aa13.96□□□□□ -0.17
VPS33B-208ENST00000574755 FBXO39Q8N4B4 442 aa13.96□□□□□ -0.17
VPS33B-208ENST00000574755 EFCAB3Q8N7B9 438 aa13.96□□□□□ -0.17
VPS33B-208ENST00000574755 KCNJ9Q92806 393 aa13.96□□□□□ -0.17
VPS33B-208ENST00000574755 RCN3Q96D15 328 aa13.96□□□□□ -0.17
VPS33B-208ENST00000574755 RPL10LQ96L21 214 aaKnown RBP13.96□□□□□ -0.17
VPS33B-208ENST00000574755 EMILIN2Q9BXX0 1053 aa13.96□□□□□ -0.17
VPS33B-208ENST00000574755 ZFYVE1Q9HBF4 777 aa13.96□□□□□ -0.17
VPS33B-208ENST00000574755 MID1IP1Q9NPA3 183 aa13.96□□□□□ -0.17
VPS33B-208ENST00000574755 ABCB8Q9NUT2 735 aa13.96□□□□□ -0.17
VPS33B-208ENST00000574755 HCFC1R1Q9NWW0 138 aa13.96□□□□□ -0.17
VPS33B-208ENST00000574755 WBP1LQ9NX94 342 aa13.96□□□□□ -0.17
VPS33B-208ENST00000574755 IKZF3Q9UKT9 509 aa13.96□□□□□ -0.17
VPS33B-208ENST00000574755 INSL6Q9Y581 213 aa13.96□□□□□ -0.17
VPS33B-208ENST00000574755 C1orf232A0A0U1RR37 186 aa13.96□□□□□ -0.18
VPS33B-208ENST00000574755 NPEPPSL1A6NEC2 478 aa13.96□□□□□ -0.18
VPS33B-208ENST00000574755 SYCE1LA8MT33 242 aa13.96□□□□□ -0.18
VPS33B-208ENST00000574755 CDC7O00311 574 aa13.96□□□□□ -0.18
VPS33B-208ENST00000574755 IGSF6O95976 241 aa13.96□□□□□ -0.18
VPS33B-208ENST00000574755 ESR1P03372 595 aa13.96□□□□□ -0.18
VPS33B-208ENST00000574755 BMP1P13497 986 aa13.96□□□□□ -0.18
VPS33B-208ENST00000574755 ARSAP15289 507 aa13.96□□□□□ -0.18
VPS33B-208ENST00000574755 VHLP40337 213 aa13.96□□□□□ -0.18
VPS33B-208ENST00000574755 INHBCP55103 352 aa13.96□□□□□ -0.18
VPS33B-208ENST00000574755 FAM219BQ5XKK7 198 aa13.96□□□□□ -0.18
VPS33B-208ENST00000574755 C16orf89Q6UX73 402 aa13.96□□□□□ -0.18
VPS33B-208ENST00000574755 FAM151BQ6UXP7 276 aa13.96□□□□□ -0.18
VPS33B-208ENST00000574755 LRRC74BQ6ZQY2 392 aa13.96□□□□□ -0.18
VPS33B-208ENST00000574755 METTL3Q86U44 580 aaKnown RBP13.96□□□□□ -0.18
VPS33B-208ENST00000574755 MYLK4Q86YV6 388 aaPredicted RBP13.96□□□□□ -0.18
VPS33B-208ENST00000574755 STK40Q8N2I9 435 aa13.96□□□□□ -0.18
VPS33B-208ENST00000574755 CLP1Q92989 425 aaKnown RBP13.96□□□□□ -0.18
VPS33B-208ENST00000574755 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.96□□□□□ -0.18
VPS33B-208ENST00000574755 ZNF570Q96NI8 536 aa13.96□□□□□ -0.18
VPS33B-208ENST00000574755 ANKRD27Q96NW4 1050 aa13.96□□□□□ -0.18
VPS33B-208ENST00000574755 ATP13A3Q9H7F0 1226 aa13.96□□□□□ -0.18
VPS33B-208ENST00000574755 SARS2Q9NP81 518 aaKnown RBP13.96□□□□□ -0.18
VPS33B-208ENST00000574755 MRGBPQ9NV56 204 aa13.96□□□□□ -0.18
VPS33B-208ENST00000574755 INTS6Q9UL03 887 aaKnown RBP13.96□□□□□ -0.18
VPS33B-208ENST00000574755 WASF2Q9Y6W5 498 aa13.96□□□□□ -0.18
VPS33B-208ENST00000574755 A0A0J9YYE9 177 aa13.95□□□□□ -0.18
VPS33B-208ENST00000574755 ATP6AP2A0A1C7CYW4 349 aa13.95□□□□□ -0.18
VPS33B-208ENST00000574755 NCF1BA6NI72 391 aaPredicted RBP13.95□□□□□ -0.18
VPS33B-208ENST00000574755 NCF1CA8MVU1 366 aaPredicted RBP13.95□□□□□ -0.18
VPS33B-208ENST00000574755 PPP6CO00743 305 aa13.95□□□□□ -0.18
VPS33B-208ENST00000574755 UBDO15205 165 aa13.95□□□□□ -0.18
VPS33B-208ENST00000574755 CLASP2O75122 1294 aaKnown RBP13.95□□□□□ -0.18
VPS33B-208ENST00000574755 GPC4O75487 556 aa13.95□□□□□ -0.18
VPS33B-208ENST00000574755 ECI2O75521 394 aa13.95□□□□□ -0.18
VPS33B-208ENST00000574755 ATP6AP2O75787 350 aa13.95□□□□□ -0.18
VPS33B-208ENST00000574755 CDK14O94921 469 aa13.95□□□□□ -0.18
VPS33B-208ENST00000574755 PRAMEF1O95521 474 aa13.95□□□□□ -0.18
VPS33B-208ENST00000574755 TRBC1P01850 177 aa13.95□□□□□ -0.18
VPS33B-208ENST00000574755 NCF1P14598 390 aaPredicted RBP13.95□□□□□ -0.18
VPS33B-208ENST00000574755 EEF1DP29692 281 aaKnown RBP13.95□□□□□ -0.18
VPS33B-208ENST00000574755 CCR2P41597 374 aa13.95□□□□□ -0.18
VPS33B-208ENST00000574755 ADARP55265 1226 aaKnown RBP13.95□□□□□ -0.18
VPS33B-208ENST00000574755 ERVFC1P60507 584 aa13.95□□□□□ -0.18
VPS33B-208ENST00000574755 IL2P60568 153 aa13.95□□□□□ -0.18
VPS33B-208ENST00000574755 RPL26P61254 145 aaKnown RBP13.95□□□□□ -0.18
VPS33B-208ENST00000574755 HERC3Q15034 1050 aa13.95□□□□□ -0.18
VPS33B-208ENST00000574755 MUM1Q2TAK8 710 aa13.95□□□□□ -0.18
VPS33B-208ENST00000574755 PLPP4Q5VZY2 271 aa13.95□□□□□ -0.18
VPS33B-208ENST00000574755 CHSY3Q70JA7 882 aa13.95□□□□□ -0.18
VPS33B-208ENST00000574755 DSELQ8IZU8 1212 aa13.95□□□□□ -0.18
VPS33B-208ENST00000574755 CLYBLQ8N0X4 340 aa13.95□□□□□ -0.18
VPS33B-208ENST00000574755 CD200R1Q8TD46 325 aa13.95□□□□□ -0.18
VPS33B-208ENST00000574755 EEF1AKMT1Q8WVE0 214 aa13.95□□□□□ -0.18
VPS33B-208ENST00000574755 FUBP1Q96AE4 644 aaKnown RBP13.95□□□□□ -0.18
VPS33B-208ENST00000574755 C19orf60Q96EN9 201 aa13.95□□□□□ -0.18
VPS33B-208ENST00000574755 NSUN5Q96P11 429 aaKnown RBP13.95□□□□□ -0.18
VPS33B-208ENST00000574755 ANGPTL2Q9UKU9 493 aa13.95□□□□□ -0.18
VPS33B-208ENST00000574755 POMPQ9Y244 141 aa13.95□□□□□ -0.18
VPS33B-208ENST00000574755 CCL26Q9Y258 94 aa13.95□□□□□ -0.18
VPS33B-208ENST00000574755 COMMD10Q9Y6G5 202 aa13.95□□□□□ -0.18
VPS33B-208ENST00000574755 IQCF5A8MTL0 148 aa13.95□□□□□ -0.18
VPS33B-208ENST00000574755 HIDE1A8MVS5 230 aa13.95□□□□□ -0.18
VPS33B-208ENST00000574755 HTRA2O43464 458 aaPredicted RBP13.95□□□□□ -0.18
VPS33B-208ENST00000574755 SOCS5O75159 536 aa13.95□□□□□ -0.18
VPS33B-208ENST00000574755 FGBP02675 491 aa13.95□□□□□ -0.18
VPS33B-208ENST00000574755 MTTPP55157 894 aa13.95□□□□□ -0.18
VPS33B-208ENST00000574755 ART3Q13508 389 aa13.95□□□□□ -0.18
VPS33B-208ENST00000574755 FBXO48Q5FWF7 155 aa13.95□□□□□ -0.18
VPS33B-208ENST00000574755 DGKKQ5KSL6 1271 aa13.95□□□□□ -0.18
VPS33B-208ENST00000574755 TLDC1Q6P9B6 456 aa13.95□□□□□ -0.18
VPS33B-208ENST00000574755 GIMAP7Q8NHV1 300 aa13.95□□□□□ -0.18
VPS33B-208ENST00000574755 TRPC4APQ8TEL6 797 aa13.95□□□□□ -0.18
VPS33B-208ENST00000574755 NRG4Q8WWG1 115 aa13.95□□□□□ -0.18
VPS33B-208ENST00000574755 ARMC5Q96C12 935 aa13.95□□□□□ -0.18
VPS33B-208ENST00000574755 LINGO1Q96FE5 620 aa13.95□□□□□ -0.18
VPS33B-208ENST00000574755 EFCAB1Q9HAE3 211 aa13.95□□□□□ -0.18
VPS33B-208ENST00000574755 ANKRD12Q6UB98 2062 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms