RNA–Protein interactions for RNA: ENST00000574205.5

CTDNEP1-209, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 5

Gene CTDNEP1, Length 1,506 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-209ENST00000574205 UAP1L1Q3KQV9 507 aa32.87■■■□□ 2.85
CTDNEP1-209ENST00000574205 ATP13A5Q4VNC0 1218 aa32.87■■■□□ 2.85
CTDNEP1-209ENST00000574205 PCID2Q5JVF3 399 aa32.87■■■□□ 2.85
CTDNEP1-209ENST00000574205 BTN2A2Q8WVV5 523 aa32.87■■■□□ 2.85
CTDNEP1-209ENST00000574205 PEX13Q92968 403 aa32.87■■■□□ 2.85
CTDNEP1-209ENST00000574205 GLYATL1Q969I3 302 aa32.87■■■□□ 2.85
CTDNEP1-209ENST00000574205 FRMD8Q9BZ67 464 aaPredicted RBP32.87■■■□□ 2.85
CTDNEP1-209ENST00000574205 FGF22Q9HCT0 170 aa32.87■■■□□ 2.85
CTDNEP1-209ENST00000574205 PCDHGB2Q9Y5G2 931 aa32.87■■■□□ 2.85
CTDNEP1-209ENST00000574205 DMXL1Q9Y485 3027 aa32.86■■■□□ 2.85
CTDNEP1-209ENST00000574205 GOLGA8MH3BSY2 632 aa32.86■■■□□ 2.85
CTDNEP1-209ENST00000574205 PRAMEF1O95521 474 aa32.86■■■□□ 2.85
CTDNEP1-209ENST00000574205 JUNDP17535 347 aa32.86■■■□□ 2.85
CTDNEP1-209ENST00000574205 SRP54P61011 504 aaKnown RBP32.86■■■□□ 2.85
CTDNEP1-209ENST00000574205 IL9RQ01113 521 aa32.86■■■□□ 2.85
CTDNEP1-209ENST00000574205 CHRNA6Q15825 494 aa32.86■■■□□ 2.85
CTDNEP1-209ENST00000574205 TRIM74Q86UV6 250 aa32.86■■■□□ 2.85
CTDNEP1-209ENST00000574205 PHACTR4Q8IZ21 702 aa32.86■■■□□ 2.85
CTDNEP1-209ENST00000574205 TSACCQ96A04 125 aaPredicted RBP32.86■■■□□ 2.85
CTDNEP1-209ENST00000574205 SNF8Q96H20 258 aa32.86■■■□□ 2.85
CTDNEP1-209ENST00000574205 SLC17A4Q9Y2C5 497 aa32.86■■■□□ 2.85
CTDNEP1-209ENST00000574205 DGKBQ9Y6T7 804 aa32.86■■■□□ 2.85
CTDNEP1-209ENST00000574205 SRP72O76094 671 aaKnown RBP32.85■■■□□ 2.85
CTDNEP1-209ENST00000574205 SLC25A14O95258 325 aaPredicted RBP32.85■■■□□ 2.85
CTDNEP1-209ENST00000574205 MGAT1P26572 445 aa32.85■■■□□ 2.85
CTDNEP1-209ENST00000574205 HK3P52790 923 aa32.85■■■□□ 2.85
CTDNEP1-209ENST00000574205 MRPS25P82663 173 aaKnown RBP32.85■■■□□ 2.85
CTDNEP1-209ENST00000574205 XIAPP98170 497 aa32.85■■■□□ 2.85
CTDNEP1-209ENST00000574205 TSTD2Q5T7W7 516 aa32.85■■■□□ 2.85
CTDNEP1-209ENST00000574205 ARMC3Q5W041 872 aa32.85■■■□□ 2.85
CTDNEP1-209ENST00000574205 PHYKPLQ8IUZ5 450 aa32.85■■■□□ 2.85
CTDNEP1-209ENST00000574205 PTCD2Q8WV60 388 aaKnown RBP32.85■■■□□ 2.85
CTDNEP1-209ENST00000574205 PDXPQ96GD0 296 aa32.85■■■□□ 2.85
CTDNEP1-209ENST00000574205 SLC13A1Q9BZW2 595 aa32.85■■■□□ 2.85
CTDNEP1-209ENST00000574205 TRIM31Q9BZY9 425 aa32.85■■■□□ 2.85
CTDNEP1-209ENST00000574205 APOBEC3BQ9UH17 382 aaKnown RBP32.85■■■□□ 2.85
CTDNEP1-209ENST00000574205 PRSS38A1L453 326 aa32.84■■■□□ 2.85
CTDNEP1-209ENST00000574205 SMAPO00193 183 aa32.84■■■□□ 2.85
CTDNEP1-209ENST00000574205 ZNF500O60304 480 aaPredicted RBP32.84■■■□□ 2.85
CTDNEP1-209ENST00000574205 AVILO75366 819 aa32.84■■■□□ 2.85
CTDNEP1-209ENST00000574205 SEC31AO94979 1220 aaKnown RBP32.84■■■□□ 2.85
CTDNEP1-209ENST00000574205 RASGRP1O95267 797 aa32.84■■■□□ 2.85
CTDNEP1-209ENST00000574205 CEACAM5P06731 702 aa32.84■■■□□ 2.85
CTDNEP1-209ENST00000574205 CRADDP78560 199 aa32.84■■■□□ 2.85
CTDNEP1-209ENST00000574205 MORF4L2Q15014 288 aa32.84■■■□□ 2.85
CTDNEP1-209ENST00000574205 SUZ12Q15022 739 aaKnown RBP32.84■■■□□ 2.85
CTDNEP1-209ENST00000574205 HID1Q8IV36 788 aa32.84■■■□□ 2.85
CTDNEP1-209ENST00000574205 ZNF398Q8TD17 642 aa32.84■■■□□ 2.85
CTDNEP1-209ENST00000574205 SAP25Q8TEE9 199 aa32.84■■■□□ 2.85
CTDNEP1-209ENST00000574205 CDKN2AIPNLQ96HQ2 116 aa32.84■■■□□ 2.85
CTDNEP1-209ENST00000574205 ERP44Q9BS26 406 aa32.84■■■□□ 2.85
CTDNEP1-209ENST00000574205 SYBUQ9NX95 663 aa32.84■■■□□ 2.85
CTDNEP1-209ENST00000574205 VPS18Q9P253 973 aa32.84■■■□□ 2.85
CTDNEP1-209ENST00000574205 CCDC78A2IDD5 438 aa32.83■■■□□ 2.85
CTDNEP1-209ENST00000574205 PIAS2O75928 621 aa32.83■■■□□ 2.85
CTDNEP1-209ENST00000574205 MAGEA3P43357 314 aa32.83■■■□□ 2.85
CTDNEP1-209ENST00000574205 BNIP3Q12983 259 aa32.83■■■□□ 2.85
CTDNEP1-209ENST00000574205 PEX6Q13608 980 aa32.83■■■□□ 2.85
CTDNEP1-209ENST00000574205 OR13J1Q8NGT2 312 aa32.83■■■□□ 2.85
CTDNEP1-209ENST00000574205 OR1E3Q8WZA6 343 aa32.83■■■□□ 2.85
CTDNEP1-209ENST00000574205 TBATAQ96M53 351 aa32.83■■■□□ 2.85
CTDNEP1-209ENST00000574205 MRPL40Q9NQ50 206 aaKnown RBP32.83■■■□□ 2.85
CTDNEP1-209ENST00000574205 CHRAC1Q9NRG0 131 aa32.83■■■□□ 2.85
CTDNEP1-209ENST00000574205 SMOXQ9NWM0 555 aa32.83■■■□□ 2.85
CTDNEP1-209ENST00000574205 CDV3Q9UKY7 258 aaKnown RBP32.83■■■□□ 2.85
CTDNEP1-209ENST00000574205 BPTFQ12830 3046 aa32.83■■■□□ 2.85
CTDNEP1-209ENST00000574205 CTAGE15A4D2H0 777 aa32.82■■■□□ 2.85
CTDNEP1-209ENST00000574205 CCL22O00626 93 aa32.82■■■□□ 2.85
CTDNEP1-209ENST00000574205 NDC80O14777 642 aa32.82■■■□□ 2.85
CTDNEP1-209ENST00000574205 CTAGE8P0CG41 777 aa32.82■■■□□ 2.85
CTDNEP1-209ENST00000574205 NFATC2Q13469 925 aa32.82■■■□□ 2.85
CTDNEP1-209ENST00000574205 KCTD16Q68DU8 428 aa32.82■■■□□ 2.85
CTDNEP1-209ENST00000574205 DOK6Q6PKX4 331 aa32.82■■■□□ 2.85
CTDNEP1-209ENST00000574205 DBX2Q6ZNG2 339 aa32.82■■■□□ 2.85
CTDNEP1-209ENST00000574205 RD3Q7Z3Z2 195 aa32.82■■■□□ 2.85
CTDNEP1-209ENST00000574205 CTAGE6Q86UF2 777 aa32.82■■■□□ 2.85
CTDNEP1-209ENST00000574205 CTAGE4Q8IX94 777 aa32.82■■■□□ 2.85
CTDNEP1-209ENST00000574205 RBFAQ8N0V3 343 aa32.82■■■□□ 2.85
CTDNEP1-209ENST00000574205 ZNF778Q96MU6 729 aa32.82■■■□□ 2.85
CTDNEP1-209ENST00000574205 ASB8Q9H765 288 aa32.82■■■□□ 2.85
CTDNEP1-209ENST00000574205 MOSPD1Q9UJG1 213 aa32.82■■■□□ 2.85
CTDNEP1-209ENST00000574205 TMPRSS11EQ9UL52 423 aa32.82■■■□□ 2.85
CTDNEP1-209ENST00000574205 TMEM98Q9Y2Y6 226 aa32.82■■■□□ 2.85
CTDNEP1-209ENST00000574205 OAS3Q9Y6K5 1087 aaKnown RBP32.82■■■□□ 2.85
CTDNEP1-209ENST00000574205 GPR39O43194 453 aa32.82■■■□□ 2.84
CTDNEP1-209ENST00000574205 UGT1A9O60656 530 aa32.82■■■□□ 2.84
CTDNEP1-209ENST00000574205 SDC3O75056 442 aa32.82■■■□□ 2.84
CTDNEP1-209ENST00000574205 ASMTLO95671 621 aa32.82■■■□□ 2.84
CTDNEP1-209ENST00000574205 TNFP01375 233 aa32.82■■■□□ 2.84
CTDNEP1-209ENST00000574205 UGT1A6P19224 532 aa32.82■■■□□ 2.84
CTDNEP1-209ENST00000574205 UGT1A1P22309 533 aa32.82■■■□□ 2.84
CTDNEP1-209ENST00000574205 UGT1A4P22310 534 aa32.82■■■□□ 2.84
CTDNEP1-209ENST00000574205 DGKAP23743 735 aa32.82■■■□□ 2.84
CTDNEP1-209ENST00000574205 MC4RP32245 332 aa32.82■■■□□ 2.84
CTDNEP1-209ENST00000574205 UGT1A3P35503 534 aa32.82■■■□□ 2.84
CTDNEP1-209ENST00000574205 UGT1A5P35504 534 aa32.82■■■□□ 2.84
CTDNEP1-209ENST00000574205 ACVR1Q04771 509 aa32.82■■■□□ 2.84
CTDNEP1-209ENST00000574205 HIBCHQ6NVY1 386 aaPredicted RBP32.82■■■□□ 2.84
CTDNEP1-209ENST00000574205 KIFC1Q9BW19 673 aa32.82■■■□□ 2.84
CTDNEP1-209ENST00000574205 RAB17Q9H0T7 212 aa32.82■■■□□ 2.84
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms