RNA–Protein interactions for RNA: ENST00000571272.5

SCARF1-205, Transcript of scavenger receptor class F member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCARF1, Length 2,871 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-205ENST00000571272 DCKP27707 260 aa17.38■□□□□ 0.37
SCARF1-205ENST00000571272 POLR2IP36954 125 aaKnown RBP17.38■□□□□ 0.37
SCARF1-205ENST00000571272 GRIK1P39086 918 aa17.38■□□□□ 0.37
SCARF1-205ENST00000571272 MLLT6P55198 1093 aaPredicted RBP17.38■□□□□ 0.37
SCARF1-205ENST00000571272 KCNK10P57789 538 aa17.38■□□□□ 0.37
SCARF1-205ENST00000571272 UPP1Q16831 310 aa17.38■□□□□ 0.37
SCARF1-205ENST00000571272 ALFQ53S48 1182 aa17.38■□□□□ 0.37
SCARF1-205ENST00000571272 KIAA2013Q8IYS2 634 aa17.38■□□□□ 0.37
SCARF1-205ENST00000571272 RNF145Q96MT1 663 aa17.38■□□□□ 0.37
SCARF1-205ENST00000571272 SLC30A3Q99726 388 aa17.38■□□□□ 0.37
SCARF1-205ENST00000571272 INTS7Q9NVH2 962 aaKnown RBP17.38■□□□□ 0.37
SCARF1-205ENST00000571272 ST3GAL5Q9UNP4 418 aa17.38■□□□□ 0.37
SCARF1-205ENST00000571272 CCDC162PA2VCL2 907 aa17.38■□□□□ 0.37
SCARF1-205ENST00000571272 LDLRP01130 860 aa17.38■□□□□ 0.37
SCARF1-205ENST00000571272 ZNF182P17025 639 aaPredicted RBP17.38■□□□□ 0.37
SCARF1-205ENST00000571272 ELK4P28324 431 aa17.38■□□□□ 0.37
SCARF1-205ENST00000571272 OGFOD2Q6N063 350 aa17.38■□□□□ 0.37
SCARF1-205ENST00000571272 TMEM214Q6NUQ4 689 aaKnown RBP17.38■□□□□ 0.37
SCARF1-205ENST00000571272 DCBLD1Q8N8Z6 715 aa17.38■□□□□ 0.37
SCARF1-205ENST00000571272 ESAMQ96AP7 390 aa17.38■□□□□ 0.37
SCARF1-205ENST00000571272 SLC10A4Q96EP9 437 aa17.38■□□□□ 0.37
SCARF1-205ENST00000571272 ATOH8Q96SQ7 321 aa17.38■□□□□ 0.37
SCARF1-205ENST00000571272 ACBD6Q9BR61 282 aa17.38■□□□□ 0.37
SCARF1-205ENST00000571272 MTG1Q9BT17 334 aaPredicted RBP17.38■□□□□ 0.37
SCARF1-205ENST00000571272 OSER1Q9NX31 292 aa17.38■□□□□ 0.37
SCARF1-205ENST00000571272 PKD2L2Q9NZM6 624 aa17.38■□□□□ 0.37
SCARF1-205ENST00000571272 DOLKQ9UPQ8 538 aa17.38■□□□□ 0.37
SCARF1-205ENST00000571272 A0A1W2PQH9 124 aa17.37■□□□□ 0.37
SCARF1-205ENST00000571272 UBA6A0AVT1 1052 aaPredicted RBP17.37■□□□□ 0.37
SCARF1-205ENST00000571272 C17orf102A2RUQ5 167 aa17.37■□□□□ 0.37
SCARF1-205ENST00000571272 SNAP91O60641 907 aa17.37■□□□□ 0.37
SCARF1-205ENST00000571272 ODC1P11926 461 aa17.37■□□□□ 0.37
SCARF1-205ENST00000571272 FCGR1AP12314 374 aa17.37■□□□□ 0.37
SCARF1-205ENST00000571272 UGT1A1P22309 533 aa17.37■□□□□ 0.37
SCARF1-205ENST00000571272 UGT1A4P22310 534 aa17.37■□□□□ 0.37
SCARF1-205ENST00000571272 TPP2P29144 1249 aaPredicted RBP17.37■□□□□ 0.37
SCARF1-205ENST00000571272 UGT1A3P35503 534 aa17.37■□□□□ 0.37
SCARF1-205ENST00000571272 UGT1A5P35504 534 aa17.37■□□□□ 0.37
SCARF1-205ENST00000571272 POLD3Q15054 466 aaPredicted RBP17.37■□□□□ 0.37
SCARF1-205ENST00000571272 FSCN1Q16658 493 aaKnown RBP17.37■□□□□ 0.37
SCARF1-205ENST00000571272 TIGD2Q4W5G0 525 aa17.37■□□□□ 0.37
SCARF1-205ENST00000571272 SDHAF4Q5VUM1 108 aa17.37■□□□□ 0.37
SCARF1-205ENST00000571272 ASB2Q96Q27 587 aa17.37■□□□□ 0.37
SCARF1-205ENST00000571272 ACOX2Q99424 681 aa17.37■□□□□ 0.37
SCARF1-205ENST00000571272 TRIM54Q9BYV2 358 aa17.37■□□□□ 0.37
SCARF1-205ENST00000571272 IFT80Q9P2H3 777 aaPredicted RBP17.37■□□□□ 0.37
SCARF1-205ENST00000571272 IKZF3Q9UKT9 509 aa17.37■□□□□ 0.37
SCARF1-205ENST00000571272 CYBBP04839 570 aa17.37■□□□□ 0.37
SCARF1-205ENST00000571272 CCR3P51677 355 aa17.37■□□□□ 0.37
SCARF1-205ENST00000571272 TRAF2Q12933 501 aa17.37■□□□□ 0.37
SCARF1-205ENST00000571272 GALNT3Q14435 633 aa17.37■□□□□ 0.37
SCARF1-205ENST00000571272 GRB14Q14449 540 aa17.37■□□□□ 0.37
SCARF1-205ENST00000571272 AGMOQ6ZNB7 445 aa17.37■□□□□ 0.37
SCARF1-205ENST00000571272 RALGPS2Q86X27 583 aaPredicted RBP17.37■□□□□ 0.37
SCARF1-205ENST00000571272 METTL23Q86XA0 190 aa17.37■□□□□ 0.37
SCARF1-205ENST00000571272 SCN4BQ8IWT1 228 aa17.37■□□□□ 0.37
SCARF1-205ENST00000571272 PGBD5Q8N414 524 aa17.37■□□□□ 0.37
SCARF1-205ENST00000571272 ZNF420Q8TAQ5 688 aaPredicted RBP17.37■□□□□ 0.37
SCARF1-205ENST00000571272 PPP1R14BQ96C90 147 aa17.37■□□□□ 0.37
SCARF1-205ENST00000571272 BIRC7Q96CA5 298 aa17.37■□□□□ 0.37
SCARF1-205ENST00000571272 MUS81Q96NY9 551 aa17.37■□□□□ 0.37
SCARF1-205ENST00000571272 ZFYVE28Q9HCC9 887 aa17.37■□□□□ 0.37
SCARF1-205ENST00000571272 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP17.37■□□□□ 0.37
SCARF1-205ENST00000571272 ZBTB11O95625 1053 aaPredicted RBP17.36■□□□□ 0.37
SCARF1-205ENST00000571272 ATXN1LP0C7T5 689 aaKnown RBP17.36■□□□□ 0.37
SCARF1-205ENST00000571272 MATN1P21941 496 aa17.36■□□□□ 0.37
SCARF1-205ENST00000571272 C21orf59P57076 290 aa17.36■□□□□ 0.37
SCARF1-205ENST00000571272 LCP2Q13094 533 aa17.36■□□□□ 0.37
SCARF1-205ENST00000571272 GALNT7Q86SF2 657 aa17.36■□□□□ 0.37
SCARF1-205ENST00000571272 FBXO39Q8N4B4 442 aa17.36■□□□□ 0.37
SCARF1-205ENST00000571272 TANKQ92844 425 aa17.36■□□□□ 0.37
SCARF1-205ENST00000571272 CHID1Q9BWS9 393 aa17.36■□□□□ 0.37
SCARF1-205ENST00000571272 RNF112Q9ULX5 631 aa17.36■□□□□ 0.37
SCARF1-205ENST00000571272 MAGED1Q9Y5V3 778 aaPredicted RBP17.36■□□□□ 0.37
SCARF1-205ENST00000571272 CCDC154A6NI56 674 aa17.36■□□□□ 0.37
SCARF1-205ENST00000571272 F8W810 466 aa17.36■□□□□ 0.37
SCARF1-205ENST00000571272 J3QRK9 145 aa17.36■□□□□ 0.37
SCARF1-205ENST00000571272 ENPP3O14638 875 aa17.36■□□□□ 0.37
SCARF1-205ENST00000571272 TNPO2O14787 897 aaKnown RBP17.36■□□□□ 0.37
SCARF1-205ENST00000571272 C1RP00736 705 aa17.36■□□□□ 0.37
SCARF1-205ENST00000571272 OR4Q2P0C623 313 aa17.36■□□□□ 0.37
SCARF1-205ENST00000571272 AGTR2P50052 363 aa17.36■□□□□ 0.37
SCARF1-205ENST00000571272 ZNF829Q3KNS6 432 aaPredicted RBP17.36■□□□□ 0.37
SCARF1-205ENST00000571272 NANOGP8Q6NSW7 305 aa17.36■□□□□ 0.37
SCARF1-205ENST00000571272 PAQR3Q6TCH7 311 aa17.36■□□□□ 0.37
SCARF1-205ENST00000571272 ZC3H7AQ8IWR0 971 aaKnown RBP17.36■□□□□ 0.37
SCARF1-205ENST00000571272 TBC1D21Q8IYX1 336 aa17.36■□□□□ 0.37
SCARF1-205ENST00000571272 GOLM1Q8NBJ4 401 aa17.36■□□□□ 0.37
SCARF1-205ENST00000571272 BORCS5Q969J3 196 aa17.36■□□□□ 0.37
SCARF1-205ENST00000571272 FBXL8Q96CD0 374 aa17.36■□□□□ 0.37
SCARF1-205ENST00000571272 PLEKHA8Q96JA3 519 aa17.36■□□□□ 0.37
SCARF1-205ENST00000571272 DOK1Q99704 481 aa17.36■□□□□ 0.37
SCARF1-205ENST00000571272 NANOGQ9H9S0 305 aa17.36■□□□□ 0.37
SCARF1-205ENST00000571272 TBCCD1Q9NVR7 557 aa17.36■□□□□ 0.37
SCARF1-205ENST00000571272 PCNAP12004 261 aa17.35■□□□□ 0.37
SCARF1-205ENST00000571272 TTKP33981 857 aa17.35■□□□□ 0.37
SCARF1-205ENST00000571272 OR4D2P58180 307 aa17.35■□□□□ 0.37
SCARF1-205ENST00000571272 TSNQ15631 228 aaKnown RBP17.35■□□□□ 0.37
SCARF1-205ENST00000571272 C16orf87Q6PH81 154 aa17.35■□□□□ 0.37
SCARF1-205ENST00000571272 ARRDC2Q8TBH0 407 aa17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms